Click here to switch to the map view.

The map label for this gene is mmgC [H]

Identifier: 117920429

GI number: 117920429

Start: 2361944

End: 2363701

Strand: Direct

Name: mmgC [H]

Synonym: Shewana3_1984

Alternate gene names: 117920429

Gene position: 2361944-2363701 (Clockwise)

Preceding gene: 117920428

Following gene: 117920432

Centisome position: 47.5

GC content: 49.94

Gene sequence:

>1758_bases
ATGAATCCTTACCAAGCTCCGTTAGCGGATATGCGTTTCTTATTGGAACAGGTTTTTGATGCGCCAAATACTTGGGCACA
ACTCCCTGATATTGCTGAAATGGTCGATATGGATACGGCCAGCGCGATTCTCGAAGAAGCCGCGAAAATCAGTGCTGAAT
TAATCCATCCGCTTAACCGTGCTGGCGATGAGCAAGGCGTTCTTCATCAGGATAATCGAGTGATTACCCCTGATGGTTAT
AAAGCTGTTTACGATCAATATTCCCAAGGCGGCTGGGTGGGCCTATGTGGTGAACCCGAGTTCGGTGGTATGGGCATGCC
GAAAATGCTGGGGGTGTTAGTCGATGAAATGGCTTACAGCGCCTGCAATGCATTCACTCTGTATGGCTCACTCACGGCGG
GGGCGGCATTATGTATTAATGCCCACGGCAGTGAAGAGATTAAAGAAACCTATTTGCCGAAGCTTTACAGCGGGGAATGG
GCAGGGGCCATGGACATGACTGAGCCTCAGGCGGGCTCAGATCTACGTAATATCCGTACCCGTGCTATCCCACAGGATGA
CGGCAGTTATGCCATTAGCGGCAGCAAAATCTTTATCACGGGTGGCGATCATGATTTAACTGAGAACGTCATTCACTTAG
TGTTGGCAAAGCTTCCTGAAAGCAAAGGTATTTCACTGTTCCTCGTGCCTAAAACCACGGTTAATGCCGATGGCAGTTTA
GGCCAAGCGAACGGTGTGAGCGTCGGTTCCATCGAACATAAAATGGGGCTTAAGGGCTCTGCCACTTGTGTAATGAACTT
TGATGAGGCAAAAGGTTACCTGATTGGTGAGCCAAATCGTGGTTTAGTGTGTATGTTCACTATGATGAACTACGAGCGCT
TAGCCATCGGTATTCAAGGGCTTGGCAGTGCGCAGGCCGCTTATCAAATGGCCGCCGATTATGCCAAAGAGCGCAACCAA
GGCGTTGCCGCTGGCGGCTCGCCCACAGGTAGCGACTCCGATCCTATTATTGTTCATGGCGACGTGCGTCGTATGCTGCT
GACCATACGTGCGATGACGGAAGCGGGGCGCGCACTCTCGGTATTTACCGGTAAACAACTCGATTTAGCAAAATATGCCG
AGGGTGAGGTTAAAGCTAAGGCTGCTCGCTACGTGGGCTTGTTAACTCCCGTGGCAAAAGCGTTTTTAACCGACCGCGGT
TTAGATGCTACTATCATGGCGCAACAAGTGTTTGGTGGTCATGGCTATATTCGCGAAACCGGCATTGAGCAGTTAGTACG
TGATACTCGTATTGCGCAGATTTACGAAGGCACTAACGGCATTCAGGCTATCGACTTCCTAGGACGAAAAGTTACAGGCG
ATAATCTCGCGACCCTTAAGGAGTTTGTGGCCGAGTTAAAGGCGCAAATGCGTGAGTTTACTCAGGTCGATGCGGTGAAA
GTGTCCGCCGTTTGTGCACGTTTGGATGCCTTAGTCAATGTTGCCGAATCCATCAATGAGCAAAAGCTGACTCAACCAGC
GCTGATTAACGCCAGTGCGGTCGACTTTTTGGATGCCTTCGGCTTCACCCTCTATGGGTTCTATTGGTTAGCCATGTTGG
ATAAAGCGGTGGGTGCTGAAGATAAGCAGTATGCCGAGCAAAAATCCTACCTCACCAAATTTTATTTCGACAAATTGCTG
CCTAAGGCTGACTATCACTTAGCACAAGTGCGCGCGGGAGATACCAGCACTATGGCGATGCCAGCTGAGCTGTTCTAA

Upstream 100 bases:

>100_bases
GGTTCTGAGTTGCAAAGTGAATTTGTAATGAGATTGTTTTCTGTATTGAACTGGTATAAATTAAAACAACTGTTTAAATC
CTACGTTTAAGAGTCTACCC

Downstream 100 bases:

>100_bases
CGTAAACTTAATCGCGTTAAACGTTCGAATTAACCCAATAAAAAAGCACTGATATTCAGTGCTTTTTCTTTTTAATTGCT
TTGTATATGACTCTGCACCT

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 585; Mature: 585

Protein sequence:

>585_residues
MNPYQAPLADMRFLLEQVFDAPNTWAQLPDIAEMVDMDTASAILEEAAKISAELIHPLNRAGDEQGVLHQDNRVITPDGY
KAVYDQYSQGGWVGLCGEPEFGGMGMPKMLGVLVDEMAYSACNAFTLYGSLTAGAALCINAHGSEEIKETYLPKLYSGEW
AGAMDMTEPQAGSDLRNIRTRAIPQDDGSYAISGSKIFITGGDHDLTENVIHLVLAKLPESKGISLFLVPKTTVNADGSL
GQANGVSVGSIEHKMGLKGSATCVMNFDEAKGYLIGEPNRGLVCMFTMMNYERLAIGIQGLGSAQAAYQMAADYAKERNQ
GVAAGGSPTGSDSDPIIVHGDVRRMLLTIRAMTEAGRALSVFTGKQLDLAKYAEGEVKAKAARYVGLLTPVAKAFLTDRG
LDATIMAQQVFGGHGYIRETGIEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNLATLKEFVAELKAQMREFTQVDAVK
VSAVCARLDALVNVAESINEQKLTQPALINASAVDFLDAFGFTLYGFYWLAMLDKAVGAEDKQYAEQKSYLTKFYFDKLL
PKADYHLAQVRAGDTSTMAMPAELF

Sequences:

>Translated_585_residues
MNPYQAPLADMRFLLEQVFDAPNTWAQLPDIAEMVDMDTASAILEEAAKISAELIHPLNRAGDEQGVLHQDNRVITPDGY
KAVYDQYSQGGWVGLCGEPEFGGMGMPKMLGVLVDEMAYSACNAFTLYGSLTAGAALCINAHGSEEIKETYLPKLYSGEW
AGAMDMTEPQAGSDLRNIRTRAIPQDDGSYAISGSKIFITGGDHDLTENVIHLVLAKLPESKGISLFLVPKTTVNADGSL
GQANGVSVGSIEHKMGLKGSATCVMNFDEAKGYLIGEPNRGLVCMFTMMNYERLAIGIQGLGSAQAAYQMAADYAKERNQ
GVAAGGSPTGSDSDPIIVHGDVRRMLLTIRAMTEAGRALSVFTGKQLDLAKYAEGEVKAKAARYVGLLTPVAKAFLTDRG
LDATIMAQQVFGGHGYIRETGIEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNLATLKEFVAELKAQMREFTQVDAVK
VSAVCARLDALVNVAESINEQKLTQPALINASAVDFLDAFGFTLYGFYWLAMLDKAVGAEDKQYAEQKSYLTKFYFDKLL
PKADYHLAQVRAGDTSTMAMPAELF
>Mature_585_residues
MNPYQAPLADMRFLLEQVFDAPNTWAQLPDIAEMVDMDTASAILEEAAKISAELIHPLNRAGDEQGVLHQDNRVITPDGY
KAVYDQYSQGGWVGLCGEPEFGGMGMPKMLGVLVDEMAYSACNAFTLYGSLTAGAALCINAHGSEEIKETYLPKLYSGEW
AGAMDMTEPQAGSDLRNIRTRAIPQDDGSYAISGSKIFITGGDHDLTENVIHLVLAKLPESKGISLFLVPKTTVNADGSL
GQANGVSVGSIEHKMGLKGSATCVMNFDEAKGYLIGEPNRGLVCMFTMMNYERLAIGIQGLGSAQAAYQMAADYAKERNQ
GVAAGGSPTGSDSDPIIVHGDVRRMLLTIRAMTEAGRALSVFTGKQLDLAKYAEGEVKAKAARYVGLLTPVAKAFLTDRG
LDATIMAQQVFGGHGYIRETGIEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNLATLKEFVAELKAQMREFTQVDAVK
VSAVCARLDALVNVAESINEQKLTQPALINASAVDFLDAFGFTLYGFYWLAMLDKAVGAEDKQYAEQKSYLTKFYFDKLL
PKADYHLAQVRAGDTSTMAMPAELF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI226958412, Length=381, Percent_Identity=29.6587926509186, Blast_Score=119, Evalue=8e-27,
Organism=Homo sapiens, GI226958414, Length=378, Percent_Identity=29.8941798941799, Blast_Score=118, Evalue=2e-26,
Organism=Homo sapiens, GI7656849, Length=367, Percent_Identity=28.0653950953678, Blast_Score=115, Evalue=1e-25,
Organism=Homo sapiens, GI4501859, Length=412, Percent_Identity=27.1844660194175, Blast_Score=115, Evalue=2e-25,
Organism=Homo sapiens, GI21361497, Length=385, Percent_Identity=28.5714285714286, Blast_Score=112, Evalue=9e-25,
Organism=Homo sapiens, GI4501857, Length=387, Percent_Identity=27.1317829457364, Blast_Score=110, Evalue=3e-24,
Organism=Homo sapiens, GI4557235, Length=436, Percent_Identity=26.1467889908257, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI76496475, Length=436, Percent_Identity=26.1467889908257, Blast_Score=107, Evalue=3e-23,
Organism=Homo sapiens, GI4557233, Length=443, Percent_Identity=25.5079006772009, Blast_Score=105, Evalue=2e-22,
Organism=Homo sapiens, GI187960098, Length=354, Percent_Identity=27.1186440677966, Blast_Score=86, Evalue=1e-16,
Organism=Homo sapiens, GI4557231, Length=354, Percent_Identity=27.1186440677966, Blast_Score=86, Evalue=1e-16,
Organism=Homo sapiens, GI4503943, Length=322, Percent_Identity=28.5714285714286, Blast_Score=73, Evalue=7e-13,
Organism=Escherichia coli, GI87082384, Length=313, Percent_Identity=28.7539936102236, Blast_Score=116, Evalue=4e-27,
Organism=Escherichia coli, GI87081958, Length=373, Percent_Identity=27.0777479892761, Blast_Score=82, Evalue=9e-17,
Organism=Caenorhabditis elegans, GI17538396, Length=385, Percent_Identity=32.2077922077922, Blast_Score=132, Evalue=6e-31,
Organism=Caenorhabditis elegans, GI17508101, Length=410, Percent_Identity=28.5365853658537, Blast_Score=119, Evalue=6e-27,
Organism=Caenorhabditis elegans, GI17534899, Length=425, Percent_Identity=27.2941176470588, Blast_Score=117, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI17533517, Length=413, Percent_Identity=26.1501210653753, Blast_Score=112, Evalue=6e-25,
Organism=Caenorhabditis elegans, GI71985184, Length=389, Percent_Identity=26.4781491002571, Blast_Score=106, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI17569725, Length=358, Percent_Identity=29.608938547486, Blast_Score=105, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI17506239, Length=401, Percent_Identity=26.4339152119701, Blast_Score=104, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI86563383, Length=317, Percent_Identity=26.1829652996845, Blast_Score=93, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI86563381, Length=317, Percent_Identity=26.1829652996845, Blast_Score=93, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI17570075, Length=355, Percent_Identity=26.1971830985915, Blast_Score=92, Evalue=7e-19,
Organism=Caenorhabditis elegans, GI71990804, Length=184, Percent_Identity=33.1521739130435, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI71985192, Length=268, Percent_Identity=29.1044776119403, Blast_Score=83, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI32563615, Length=228, Percent_Identity=29.8245614035088, Blast_Score=82, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17551932, Length=305, Percent_Identity=24.9180327868852, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17505929, Length=364, Percent_Identity=25.5494505494505, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI21355753, Length=379, Percent_Identity=31.3984168865435, Blast_Score=129, Evalue=5e-30,
Organism=Drosophila melanogaster, GI21356377, Length=361, Percent_Identity=26.5927977839335, Blast_Score=109, Evalue=6e-24,
Organism=Drosophila melanogaster, GI24666513, Length=425, Percent_Identity=28.2352941176471, Blast_Score=106, Evalue=4e-23,
Organism=Drosophila melanogaster, GI281363737, Length=447, Percent_Identity=25.2796420581655, Blast_Score=102, Evalue=6e-22,
Organism=Drosophila melanogaster, GI24660351, Length=341, Percent_Identity=28.7390029325513, Blast_Score=92, Evalue=8e-19,
Organism=Drosophila melanogaster, GI24646207, Length=403, Percent_Identity=25.8064516129032, Blast_Score=87, Evalue=3e-17,
Organism=Drosophila melanogaster, GI19920834, Length=394, Percent_Identity=27.9187817258883, Blast_Score=75, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 63249; Mature: 63249

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPYQAPLADMRFLLEQVFDAPNTWAQLPDIAEMVDMDTASAILEEAAKISAELIHPLNR
CCCCCCCHHHHHHHHHHHHCCCCCHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
AGDEQGVLHQDNRVITPDGYKAVYDQYSQGGWVGLCGEPEFGGMGMPKMLGVLVDEMAYS
CCCCCCCEECCCEEECCCCHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHH
ACNAFTLYGSLTAGAALCINAHGSEEIKETYLPKLYSGEWAGAMDMTEPQAGSDLRNIRT
HHCCEEEEECHHCCEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
RAIPQDDGSYAISGSKIFITGGDHDLTENVIHLVLAKLPESKGISLFLVPKTTVNADGSL
HCCCCCCCCEEEECCEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCEECCCCCC
GQANGVSVGSIEHKMGLKGSATCVMNFDEAKGYLIGEPNRGLVCMFTMMNYERLAIGIQG
CCCCCCEECCCHHHCCCCCCCEEEEEECCCCCEEEECCCCCEEEEEEHHCCEEEEEECCC
LGSAQAAYQMAADYAKERNQGVAAGGSPTGSDSDPIIVHGDVRRMLLTIRAMTEAGRALS
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHCCCEEE
VFTGKQLDLAKYAEGEVKAKAARYVGLLTPVAKAFLTDRGLDATIMAQQVFGGHGYIRET
EECCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHH
GIEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNLATLKEFVAELKAQMREFTQVDAVK
HHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VSAVCARLDALVNVAESINEQKLTQPALINASAVDFLDAFGFTLYGFYWLAMLDKAVGAE
HHHHHHHHHHHHHHHHHHCHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DKQYAEQKSYLTKFYFDKLLPKADYHLAQVRAGDTSTMAMPAELF
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHCC
>Mature Secondary Structure
MNPYQAPLADMRFLLEQVFDAPNTWAQLPDIAEMVDMDTASAILEEAAKISAELIHPLNR
CCCCCCCHHHHHHHHHHHHCCCCCHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
AGDEQGVLHQDNRVITPDGYKAVYDQYSQGGWVGLCGEPEFGGMGMPKMLGVLVDEMAYS
CCCCCCCEECCCEEECCCCHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHH
ACNAFTLYGSLTAGAALCINAHGSEEIKETYLPKLYSGEWAGAMDMTEPQAGSDLRNIRT
HHCCEEEEECHHCCEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
RAIPQDDGSYAISGSKIFITGGDHDLTENVIHLVLAKLPESKGISLFLVPKTTVNADGSL
HCCCCCCCCEEEECCEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCEECCCCCC
GQANGVSVGSIEHKMGLKGSATCVMNFDEAKGYLIGEPNRGLVCMFTMMNYERLAIGIQG
CCCCCCEECCCHHHCCCCCCCEEEEEECCCCCEEEECCCCCEEEEEEHHCCEEEEEECCC
LGSAQAAYQMAADYAKERNQGVAAGGSPTGSDSDPIIVHGDVRRMLLTIRAMTEAGRALS
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHCCCEEE
VFTGKQLDLAKYAEGEVKAKAARYVGLLTPVAKAFLTDRGLDATIMAQQVFGGHGYIRET
EECCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHH
GIEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNLATLKEFVAELKAQMREFTQVDAVK
HHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VSAVCARLDALVNVAESINEQKLTQPALINASAVDFLDAFGFTLYGFYWLAMLDKAVGAE
HHHHHHHHHHHHHHHHHHCHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DKQYAEQKSYLTKFYFDKLLPKADYHLAQVRAGDTSTMAMPAELF
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]