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The map label for this gene is yciS [H]

Identifier: 117920424

GI number: 117920424

Start: 2358049

End: 2358324

Strand: Direct

Name: yciS [H]

Synonym: Shewana3_1979

Alternate gene names: 117920424

Gene position: 2358049-2358324 (Clockwise)

Preceding gene: 117920423

Following gene: 117920425

Centisome position: 47.42

GC content: 44.2

Gene sequence:

>276_bases
GTGAAATCTTTTGTAGCGACAGTCCTTGTGGCACTGTTATTTATCGTGGCATTGATTTTTGGTGCGCGTAATGAACAAGT
AGTGACGATCAGCTACTTTGTGGCTCAGGGTGAGTATCGTTTACCCGTAGTCTTAGCCGTGGTTTTCTTTGCAGGCTTTA
TGTTGAGTTGGCTCGTGGCCAGCTATTATATTGTCAAACTAAAATTGGCTTTAGCGGCGACCAGAAAGAAATTAACGGTC
CAAACCGCTAAAACTCCTCAAGGTGTAGACGCCTAA

Upstream 100 bases:

>100_bases
CGTAAGGGGGCTTTTTTATATCTAATGCAAGGCAAAGCTGGTCAGCTCAGTAAATTTCTTGGATAATCAGAAAATTGAAA
GGCGTTTAAGGGAGTGCAAC

Downstream 100 bases:

>100_bases
TATGCTTGAGATCCTCTTCCTGCTGCTTCCTATTGCTGCCGGTTACGGTTGGTATATGGGGCGGCGGAGCATAAGGCAAA
ACCAGAGTAATCAGCGTAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 91; Mature: 91

Protein sequence:

>91_residues
MKSFVATVLVALLFIVALIFGARNEQVVTISYFVAQGEYRLPVVLAVVFFAGFMLSWLVASYYIVKLKLALAATRKKLTV
QTAKTPQGVDA

Sequences:

>Translated_91_residues
MKSFVATVLVALLFIVALIFGARNEQVVTISYFVAQGEYRLPVVLAVVFFAGFMLSWLVASYYIVKLKLALAATRKKLTV
QTAKTPQGVDA
>Mature_91_residues
MKSFVATVLVALLFIVALIFGARNEQVVTISYFVAQGEYRLPVVLAVVFFAGFMLSWLVASYYIVKLKLALAATRKKLTV
QTAKTPQGVDA

Specific function: Unknown

COG id: COG3771

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1222 [H]

Homologues:

Organism=Escherichia coli, GI1787535, Length=78, Percent_Identity=38.4615384615385, Blast_Score=69, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010445 [H]

Pfam domain/function: PF06305 DUF1049 [H]

EC number: NA

Molecular weight: Translated: 9986; Mature: 9986

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSFVATVLVALLFIVALIFGARNEQVVTISYFVAQGEYRLPVVLAVVFFAGFMLSWLVA
CHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
SYYIVKLKLALAATRKKLTVQTAKTPQGVDA
HHHHHHHHHHHHHHHHHHEEEECCCCCCCCC
>Mature Secondary Structure
MKSFVATVLVALLFIVALIFGARNEQVVTISYFVAQGEYRLPVVLAVVFFAGFMLSWLVA
CHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
SYYIVKLKLALAATRKKLTVQTAKTPQGVDA
HHHHHHHHHHHHHHHHHHEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]