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The map label for this gene is yciM [H]

Identifier: 117920425

GI number: 117920425

Start: 2358326

End: 2359486

Strand: Direct

Name: yciM [H]

Synonym: Shewana3_1980

Alternate gene names: 117920425

Gene position: 2358326-2359486 (Clockwise)

Preceding gene: 117920424

Following gene: 117920426

Centisome position: 47.43

GC content: 47.63

Gene sequence:

>1161_bases
ATGCTTGAGATCCTCTTCCTGCTGCTTCCTATTGCTGCCGGTTACGGTTGGTATATGGGGCGGCGGAGCATAAGGCAAAA
CCAGAGTAATCAGCGTAAGCAATTAAGTCGTGATTATTTCACCGGCTTGAATTTCCTGTTGTCAAACGAGTCAGACAAAG
CGGTCGACTTGTTTATCAGTATGCTCGATGTGGACGATGAAACCATCGATACTCATCTTTCCCTCGGGTCGTTATTCCGC
AAACGCGGTGAAGTTGACCGCTCCATTCGTATCCATCAAAACTTAATCGCACGTCCCACACTCACCAATGAGCAGCGCGA
TATCGCGATGATGGAACTGGGTAAAGATTACCTTGCGGCGGGGTTTTACGACCGTGCAGAAGAAATTTTCCTGAATTTGG
TGAGTCAAGATGACCATAGCGAAGAGTCTGAGACGCAGCTGATTGCCATTTATCAAGTCATTAAGGAATGGCAAAAGGCC
ATCGACATCACCAAGCGCTTAAGCCGCAAGCGTCAGCAGGTGCTTAAACCGATTATCGCCCATTTTTATTGCCAGCTTGC
GGATGAAACCAGCGACGATGCTGACAAGATCAAGTTATTACTACAGGCCTTAAAACAAGATCCTAAGTGTGGCCGAGCCT
TACTCACGCTCGCCAAAAAATTCCTCGACGCCAAGGATTATAACCAGTGCAAATCTATGCTGATGGCACTGAAAAAGGCT
GACATAGAACTTTTTGCCGATGCCTTACCAACGGCCAAGCAAGTGTATCGCGATACCCAAGATAAAGAGGGCTATCAAGA
ATTATTAGCGGGCGCGATGGCCGAAGGGGCGGGCGCCTCCGTGGTGGTAGCGCTTGCTCAACATATGATTAGTCTCGATG
AGATAAAAACTGCTGAAAACATGGTGTTGGATGCCCTGTATCGCCATCCCACCATGAAGGGGTTTCAGCACTTAATGCAG
ATGCACCTGCGTCAAGCTGAAGAAGGGCAAGCCAAACAAAGTTTGACTATGCTTGAGCAACTTGTTGAACAACAAATTAA
ATTCCGTCCAAGTTATCGCTGTAAAGAATGCGGTTTCCCATCCCACACCCTGTATTGGCATTGCCCCTCCTGTAAAAAAT
GGGGCACCATTAAACGGATCCGTGGCTTAGACGGTGAATAA

Upstream 100 bases:

>100_bases
GCCAGCTATTATATTGTCAAACTAAAATTGGCTTTAGCGGCGACCAGAAAGAAATTAACGGTCCAAACCGCTAAAACTCC
TCAAGGTGTAGACGCCTAAT

Downstream 100 bases:

>100_bases
CCTTTAGAAATACCTTGTTAGTGTAACTCAGTTGGAGAGATGATGACGACCAAACCTATCCTCGTAGCGCTTGATTACGA
TAATAAAAACCACGCCTTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MLEILFLLLPIAAGYGWYMGRRSIRQNQSNQRKQLSRDYFTGLNFLLSNESDKAVDLFISMLDVDDETIDTHLSLGSLFR
KRGEVDRSIRIHQNLIARPTLTNEQRDIAMMELGKDYLAAGFYDRAEEIFLNLVSQDDHSEESETQLIAIYQVIKEWQKA
IDITKRLSRKRQQVLKPIIAHFYCQLADETSDDADKIKLLLQALKQDPKCGRALLTLAKKFLDAKDYNQCKSMLMALKKA
DIELFADALPTAKQVYRDTQDKEGYQELLAGAMAEGAGASVVVALAQHMISLDEIKTAENMVLDALYRHPTMKGFQHLMQ
MHLRQAEEGQAKQSLTMLEQLVEQQIKFRPSYRCKECGFPSHTLYWHCPSCKKWGTIKRIRGLDGE

Sequences:

>Translated_386_residues
MLEILFLLLPIAAGYGWYMGRRSIRQNQSNQRKQLSRDYFTGLNFLLSNESDKAVDLFISMLDVDDETIDTHLSLGSLFR
KRGEVDRSIRIHQNLIARPTLTNEQRDIAMMELGKDYLAAGFYDRAEEIFLNLVSQDDHSEESETQLIAIYQVIKEWQKA
IDITKRLSRKRQQVLKPIIAHFYCQLADETSDDADKIKLLLQALKQDPKCGRALLTLAKKFLDAKDYNQCKSMLMALKKA
DIELFADALPTAKQVYRDTQDKEGYQELLAGAMAEGAGASVVVALAQHMISLDEIKTAENMVLDALYRHPTMKGFQHLMQ
MHLRQAEEGQAKQSLTMLEQLVEQQIKFRPSYRCKECGFPSHTLYWHCPSCKKWGTIKRIRGLDGE
>Mature_386_residues
MLEILFLLLPIAAGYGWYMGRRSIRQNQSNQRKQLSRDYFTGLNFLLSNESDKAVDLFISMLDVDDETIDTHLSLGSLFR
KRGEVDRSIRIHQNLIARPTLTNEQRDIAMMELGKDYLAAGFYDRAEEIFLNLVSQDDHSEESETQLIAIYQVIKEWQKA
IDITKRLSRKRQQVLKPIIAHFYCQLADETSDDADKIKLLLQALKQDPKCGRALLTLAKKFLDAKDYNQCKSMLMALKKA
DIELFADALPTAKQVYRDTQDKEGYQELLAGAMAEGAGASVVVALAQHMISLDEIKTAENMVLDALYRHPTMKGFQHLMQ
MHLRQAEEGQAKQSLTMLEQLVEQQIKFRPSYRCKECGFPSHTLYWHCPSCKKWGTIKRIRGLDGE

Specific function: Unknown

COG id: COG2956

COG function: function code G; Predicted N-acetylglucosaminyl transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 6 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI2367116, Length=379, Percent_Identity=45.3825857519789, Blast_Score=348, Evalue=4e-97,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44303; Mature: 44303

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCEEEECCCCCCCCHHHHHCCCCCC
>Mature Secondary Structure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CCCEEEECCCCCCCCHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]