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The map label for this gene is ruvB [H]

Identifier: 117920402

GI number: 117920402

Start: 2328348

End: 2329352

Strand: Direct

Name: ruvB [H]

Synonym: Shewana3_1957

Alternate gene names: 117920402

Gene position: 2328348-2329352 (Clockwise)

Preceding gene: 117920401

Following gene: 117920403

Centisome position: 46.83

GC content: 50.45

Gene sequence:

>1005_bases
ATGATTGAAGCAGATAGACTGATCCAGCCGCAGCTGCAAGGTCAAGACGATGTTATCGACAGGGCCATGCGCCCTAAATT
GCTCGATGAATATACTGGGCAGGATGATACGCGTGCCCAATTAAAAGTGTTTATTCAAGCGGCAAAGAATCGCGAAGAAG
CCTTAGACCATATGCTGATCTACGGCCCGCCGGGGTTAGGTAAAACCACCTTAGCCATGATCGTGGCTAATGAAATGGGG
GTGAACATCAAATCGACGTCGGGGCCTGTGCTCGAGAAAGCCGGGGACTTGGCGGCGCTGCTCACCAATCTTGAGGCGGG
GGATGTGCTTTTTATCGATGAAATTCACCGCTTAAGTCCTGTCGTCGAAGAAATTCTGTATCCTGCTATGGAAGACTATC
AGCTGGATATTATGATTGGTGAGGGGCCTGCTGCACGCTCAATTAAGTTGGACCTACCGCCTTTTACCTTAGTGGGGGCG
ACCACGCGGGCAGGGGCGTTAACCTCTCCGCTAAGGGCGCGTTTTGGCATTCCACTGCGGCTCGAGTTTTATAATGTCAA
AGATTTAAGCACTATTGTGACCCGTTCGGCACAGGTGATGGGATTGGCCATTGATAGTGAAGGGGCCACCGAAATTGCCA
AACGCTCACGGGGAACACCGAGGATCGCCAACCGTTTACTGCGTCGAGTGCGTGACTATGCGGAAGTGAAACACGACGGT
GCTGTAACGCAAAAAGTTGCGGAGCAGGCGCTTGATTTACTCGATGTCGATGGCGAAGGTTTCGATTATATGGATCGAAA
ACTGCTGCTTGCTATTATCGATAAGTTTATGGGAGGCCCTGTAGGGCTTGATAACCTTGCCGCGGCTATTGGTGAGGAGC
GTGAAACCATTGAAGATGTATTGGAGCCTTTCCTTATCCAACAAGGCTTTATCCAACGTACTCCACGTGGTCGTATTGCC
ACAACCCGAGCCTATCTGCATTTTGGCATGATAAAACCAGAGTAA

Upstream 100 bases:

>100_bases
CTAGTGTTATATTGCGGTACGCGATTTTTGCAGCCAGTTAGGTTGCAACTGCACCAAAATAGCAAGTGCCGTATGTCGAT
GCGGTAACAGGAATAGGTAA

Downstream 100 bases:

>100_bases
CATCCAAGAAGGATGACCTTGTTAACAAAAAGCGGCCTTGGCCGCTTTTTGTTTTTACCGATTTTATTATTGTCCTTTTT
GTCACCAGATAATGTTGCCG

Product: Holliday junction DNA helicase RuvB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MIEADRLIQPQLQGQDDVIDRAMRPKLLDEYTGQDDTRAQLKVFIQAAKNREEALDHMLIYGPPGLGKTTLAMIVANEMG
VNIKSTSGPVLEKAGDLAALLTNLEAGDVLFIDEIHRLSPVVEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGA
TTRAGALTSPLRARFGIPLRLEFYNVKDLSTIVTRSAQVMGLAIDSEGATEIAKRSRGTPRIANRLLRRVRDYAEVKHDG
AVTQKVAEQALDLLDVDGEGFDYMDRKLLLAIIDKFMGGPVGLDNLAAAIGEERETIEDVLEPFLIQQGFIQRTPRGRIA
TTRAYLHFGMIKPE

Sequences:

>Translated_334_residues
MIEADRLIQPQLQGQDDVIDRAMRPKLLDEYTGQDDTRAQLKVFIQAAKNREEALDHMLIYGPPGLGKTTLAMIVANEMG
VNIKSTSGPVLEKAGDLAALLTNLEAGDVLFIDEIHRLSPVVEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGA
TTRAGALTSPLRARFGIPLRLEFYNVKDLSTIVTRSAQVMGLAIDSEGATEIAKRSRGTPRIANRLLRRVRDYAEVKHDG
AVTQKVAEQALDLLDVDGEGFDYMDRKLLLAIIDKFMGGPVGLDNLAAAIGEERETIEDVLEPFLIQQGFIQRTPRGRIA
TTRAYLHFGMIKPE
>Mature_334_residues
MIEADRLIQPQLQGQDDVIDRAMRPKLLDEYTGQDDTRAQLKVFIQAAKNREEALDHMLIYGPPGLGKTTLAMIVANEMG
VNIKSTSGPVLEKAGDLAALLTNLEAGDVLFIDEIHRLSPVVEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGA
TTRAGALTSPLRARFGIPLRLEFYNVKDLSTIVTRSAQVMGLAIDSEGATEIAKRSRGTPRIANRLLRRVRDYAEVKHDG
AVTQKVAEQALDLLDVDGEGFDYMDRKLLLAIIDKFMGGPVGLDNLAAAIGEERETIEDVLEPFLIQQGFIQRTPRGRIA
TTRAYLHFGMIKPE

Specific function: The ruvA-ruvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is an helicase that mediates the Holliday

COG id: COG2255

COG function: function code L; Holliday junction resolvasome, helicase subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ruvB family [H]

Homologues:

Organism=Escherichia coli, GI1788167, Length=334, Percent_Identity=77.2455089820359, Blast_Score=530, Evalue=1e-152,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR004605
- InterPro:   IPR008823
- InterPro:   IPR008824
- InterPro:   IPR011991
- ProDom:   PD005323 [H]

Pfam domain/function: PF05491 RuvB_C; PF05496 RuvB_N [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 36835; Mature: 36835

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEADRLIQPQLQGQDDVIDRAMRPKLLDEYTGQDDTRAQLKVFIQAAKNREEALDHMLI
CCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHCEEE
YGPPGLGKTTLAMIVANEMGVNIKSTSGPVLEKAGDLAALLTNLEAGDVLFIDEIHRLSP
ECCCCCCHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHH
VVEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGALTSPLRARFGIPLR
HHHHHHHCCCCCEEEEEEECCCCCCCEEEECCCCEEEEECCCCCCCCCCHHHHHCCCCEE
LEFYNVKDLSTIVTRSAQVMGLAIDSEGATEIAKRSRGTPRIANRLLRRVRDYAEVKHDG
EEEECCHHHHHHHHCCCEEEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC
AVTQKVAEQALDLLDVDGEGFDYMDRKLLLAIIDKFMGGPVGLDNLAAAIGEERETIEDV
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHH
LEPFLIQQGFIQRTPRGRIATTRAYLHFGMIKPE
HHHHHHHHHHHHCCCCCCEEHHHHHHEECCCCCC
>Mature Secondary Structure
MIEADRLIQPQLQGQDDVIDRAMRPKLLDEYTGQDDTRAQLKVFIQAAKNREEALDHMLI
CCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHCEEE
YGPPGLGKTTLAMIVANEMGVNIKSTSGPVLEKAGDLAALLTNLEAGDVLFIDEIHRLSP
ECCCCCCHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHH
VVEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGALTSPLRARFGIPLR
HHHHHHHCCCCCEEEEEEECCCCCCCEEEECCCCEEEEECCCCCCCCCCHHHHHCCCCEE
LEFYNVKDLSTIVTRSAQVMGLAIDSEGATEIAKRSRGTPRIANRLLRRVRDYAEVKHDG
EEEECCHHHHHHHHCCCEEEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC
AVTQKVAEQALDLLDVDGEGFDYMDRKLLLAIIDKFMGGPVGLDNLAAAIGEERETIEDV
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHH
LEPFLIQQGFIQRTPRGRIATTRAYLHFGMIKPE
HHHHHHHHHHHHCCCCCCEEHHHHHHEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA