| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117920380
Identifier: 117920380
GI number: 117920380
Start: 2300304
End: 2301413
Strand: Direct
Name: 117920380
Synonym: Shewana3_1935
Alternate gene names: NA
Gene position: 2300304-2301413 (Clockwise)
Preceding gene: 117920378
Following gene: 117920381
Centisome position: 46.26
GC content: 47.03
Gene sequence:
>1110_bases ATGCCTTTTTGTGCAACGTCTTTCAGCGCTACAGCCCAAGGCGCTACAGATTTGAATACTAAGCCTTTTAGCGCTCATGC AGAGCCTTTGGGGAGCGATATAAGCCTTAATTTGCATGAGGCTAACCAAAAAGATATCGATAGCACATTTCAAACATCTT CAAAGCTAAGTGGGCGAGAGTGGTCGCAGTATTTCAATCTTAAGCCATTGTTTGGGGTCATTCTGGGCCATGGCTTACTG CTGTTGTTATTAATTTTTTTATGGCGAACTCAGTCGGAACACTTAGGGCTGTCGTTTACCGAATCATCTTCCAACGCACG GACTACAACCAAGGCGTTAAAGGCGTATTTTATTTATGCGCCGCCAACGCAAACTGCTCCAGCGGATCCGCCTCAAGATT ACTCCGTTGAAGAACCTACCGTTTCTAGTGAGCCGATCACTTCGCCGCCTAACACTACGCAGCTGACAGTGGATGTTGAA CCAGCCGCAAAAGTGATACCAAAACCCACGGAAAAGTTGGCGCCAAAAACTACAGAGCAGATTGCAAAACCTCTTGAAGT CAGCGCCCAAGCGTCGAATAGAGCAGTTTCAAAGACTCCAACACAGGACCAAACCCAGCAGAGTGCAAAAGAAGCTATTA AGCCTCAAAAGGCAGAAGTCCAATCAAGCTCGGCTCAAGCGGCAAGTACTCAGCAGTCAGATACTGGTGAGCAAAGCAGC GGTGCGGCTGGCAGTGTCGGTTTATTTACCCAGCGTTATTTTGAACGCCAGCGTGAGCAAGCCTTAGATGATTTAGTGTT AGAGCAGGCAAATCATTACAGCAAACGGTCGACTATGTCTGAAATGAGCCCCGAGATGGAGGTGTTGATTGTGCCCAATG CCGACGATTTTAGCGGCCCCACCAGTTTAGATTTAGAACTGGATCCCAATCGAATTGTCCGTAAAGGGGATACCTGCTAC CGGGTCGTTAAAGTCGGCACCCAAATTAATCCCTATGCGGAGAATTTAGGGTTCCCCTTCAATTGCAGTGGCAAGAAAAT GAATCAAGAAATTGATGATGCCATTAAGGCGCAGCTCGATAAAATGATGGTAAAGCGGCCAAAAGATTAA
Upstream 100 bases:
>100_bases ATGGATTTTGCCTATTCGTTCGAATATTACCCCAGAAGATGATCTTAGTTTTGACGCGTACGGTCGTGTGACAAACGATG AGACCGCACCATTTTCCGTT
Downstream 100 bases:
>100_bases AAAATAGTGATGATAAATTTTCACTAAAAATGATATTTATTGTGGATTATAGAGTTTATTAAAATTAAATCTGTTTTATA CAATAGGTTATTTGTTCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 369; Mature: 368
Protein sequence:
>369_residues MPFCATSFSATAQGATDLNTKPFSAHAEPLGSDISLNLHEANQKDIDSTFQTSSKLSGREWSQYFNLKPLFGVILGHGLL LLLLIFLWRTQSEHLGLSFTESSSNARTTTKALKAYFIYAPPTQTAPADPPQDYSVEEPTVSSEPITSPPNTTQLTVDVE PAAKVIPKPTEKLAPKTTEQIAKPLEVSAQASNRAVSKTPTQDQTQQSAKEAIKPQKAEVQSSSAQAASTQQSDTGEQSS GAAGSVGLFTQRYFERQREQALDDLVLEQANHYSKRSTMSEMSPEMEVLIVPNADDFSGPTSLDLELDPNRIVRKGDTCY RVVKVGTQINPYAENLGFPFNCSGKKMNQEIDDAIKAQLDKMMVKRPKD
Sequences:
>Translated_369_residues MPFCATSFSATAQGATDLNTKPFSAHAEPLGSDISLNLHEANQKDIDSTFQTSSKLSGREWSQYFNLKPLFGVILGHGLL LLLLIFLWRTQSEHLGLSFTESSSNARTTTKALKAYFIYAPPTQTAPADPPQDYSVEEPTVSSEPITSPPNTTQLTVDVE PAAKVIPKPTEKLAPKTTEQIAKPLEVSAQASNRAVSKTPTQDQTQQSAKEAIKPQKAEVQSSSAQAASTQQSDTGEQSS GAAGSVGLFTQRYFERQREQALDDLVLEQANHYSKRSTMSEMSPEMEVLIVPNADDFSGPTSLDLELDPNRIVRKGDTCY RVVKVGTQINPYAENLGFPFNCSGKKMNQEIDDAIKAQLDKMMVKRPKD >Mature_368_residues PFCATSFSATAQGATDLNTKPFSAHAEPLGSDISLNLHEANQKDIDSTFQTSSKLSGREWSQYFNLKPLFGVILGHGLLL LLLIFLWRTQSEHLGLSFTESSSNARTTTKALKAYFIYAPPTQTAPADPPQDYSVEEPTVSSEPITSPPNTTQLTVDVEP AAKVIPKPTEKLAPKTTEQIAKPLEVSAQASNRAVSKTPTQDQTQQSAKEAIKPQKAEVQSSSAQAASTQQSDTGEQSSG AAGSVGLFTQRYFERQREQALDDLVLEQANHYSKRSTMSEMSPEMEVLIVPNADDFSGPTSLDLELDPNRIVRKGDTCYR VVKVGTQINPYAENLGFPFNCSGKKMNQEIDDAIKAQLDKMMVKRPKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40349; Mature: 40218
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFCATSFSATAQGATDLNTKPFSAHAEPLGSDISLNLHEANQKDIDSTFQTSSKLSGRE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCHH WSQYFNLKPLFGVILGHGLLLLLLIFLWRTQSEHLGLSFTESSSNARTTTKALKAYFIYA HHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHEEEEEEC PPTQTAPADPPQDYSVEEPTVSSEPITSPPNTTQLTVDVEPAAKVIPKPTEKLAPKTTEQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHCCCCCHHHHCCCCHHH IAKPLEVSAQASNRAVSKTPTQDQTQQSAKEAIKPQKAEVQSSSAQAASTQQSDTGEQSS HHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHCHHHHHHCCCCCCCCCCC GAAGSVGLFTQRYFERQREQALDDLVLEQANHYSKRSTMSEMSPEMEVLIVPNADDFSGP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCC TSLDLELDPNRIVRKGDTCYRVVKVGTQINPYAENLGFPFNCSGKKMNQEIDDAIKAQLD CEEEEEECCHHHHHCCCHHEEHHHHCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHH KMMVKRPKD HHHHCCCCC >Mature Secondary Structure PFCATSFSATAQGATDLNTKPFSAHAEPLGSDISLNLHEANQKDIDSTFQTSSKLSGRE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCHH WSQYFNLKPLFGVILGHGLLLLLLIFLWRTQSEHLGLSFTESSSNARTTTKALKAYFIYA HHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHEEEEEEC PPTQTAPADPPQDYSVEEPTVSSEPITSPPNTTQLTVDVEPAAKVIPKPTEKLAPKTTEQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHCCCCCHHHHCCCCHHH IAKPLEVSAQASNRAVSKTPTQDQTQQSAKEAIKPQKAEVQSSSAQAASTQQSDTGEQSS HHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHCHHHHHHCCCCCCCCCCC GAAGSVGLFTQRYFERQREQALDDLVLEQANHYSKRSTMSEMSPEMEVLIVPNADDFSGP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCC TSLDLELDPNRIVRKGDTCYRVVKVGTQINPYAENLGFPFNCSGKKMNQEIDDAIKAQLD CEEEEEECCHHHHHCCCHHEEHHHHCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHH KMMVKRPKD HHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA