Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

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The map label for this gene is 117920370

Identifier: 117920370

GI number: 117920370

Start: 2289868

End: 2291463

Strand: Reverse

Name: 117920370

Synonym: Shewana3_1925

Alternate gene names: NA

Gene position: 2291463-2289868 (Counterclockwise)

Preceding gene: 117920374

Following gene: 117920369

Centisome position: 46.09

GC content: 50.94

Gene sequence:

>1596_bases
ATGTCCGCGGATCAACAAACGGTTACCCCATTAGAGAATTTCTCGCCCAAGGTGGCGCAGCGCGCCGTACATAGGGTGCA
ACCCGAGCTGAATTTCTGGCAAATCTTCAATATGTGCTTTGGCTTTTTGGGGATCCAATTCGGCTTCGCCCTGCAAAATG
CCAACGTCAGCCGCATTTTCCAAACCCTTGGCGCCTCTATCGATGATATCCCCATCCTGTGGATTGCCGCACCGTTAACG
GGTCTGCTGGTTCAACCTATTATTGGTTATCTTAGCGATAACACATGGGGGCGTTTAGGTCGCCGCCGGCCGTATTTTTT
AATCGGCGCCATTTGTACGACTCTTGCGATTTTTGTGATGCCACATTCCCCGACGTTATGGATTGCCGCAGGCATGCTGT
GGATTATGGATGCCTCAATCAATATCGCCATGGAACCCTTCCGTGCCTTTGTGGGGGATAATTTGCCTCCCAAACAGCGC
ACCCAAGGCTATGCCATGCAAAGCTTTTTTATCGGCATCGGCGCGGTTGTTGCCTCGGCCCTGCCCTATGTTCTCAGCAA
CTACTTTGATGTCGCCAATACGGCGCCCGCGGGTGAAATCGCCGATTCGGTGCGTTATGCCTTCTATTTTGGTGGTGCCG
TGCTGTTTCTCAGCGTGGCTTGGACTGTTGTGTCCACCAAAGAATATTCCCCCGATGAACTCGCCGCCTTCCATGGCAAT
GCTGACGCAGGCGCAGATGAGCAACAACATCGCACTCGTACCCATAAGAATTATCAATTTGCCGCTATCGTTTGGATGGC
TGTAGGCGCATTACTGACTTTTGCAGTGTGGGCACAGGATTTAGATAAGCAGCTGTATATTTTAACCTTAGGGATTTTTG
TCTTTGGCCCATTGCAACTTTACTGCGCCCTGCGTTTAGGCAAATCAACGCCCTCACAACGCGCGCAACTGGGCATTGTC
TTTAATGTGGTCGACGATTTATTCCATATGCCGAAGGCCATGCATCAGTTAGCGATAGTGCAGTTTTTCTCTTGGTTCGC
GCTCTTTGCGATGTGGATTTACACCACCTCGGCGGTGACGTCCTACCATTTTGGCAGCAGCGATGTGTTGTCTAAGGCCT
ATAACGATGGCGCCGATTGGGTGGGCGTACTGTTCGCCTCCTACAATGGATTTTCGGCCATTGCGGCCCTGTTTATCCCG
CTACTGGCTAAACGTATCGGTATCAAACTGACCCACACCTTTAATATGTTCTGCGGCGGTTTTGGCTTGATCAGTTTCTA
TTTTATTAAAGATCCCAGTCTGTTATGGCTGCCTATGATTGGCGTGGGTATCGCCTGGGCTTCGATTCTCTCCGTGCCCT
ACGCCATGTTATCCGGCGCCTTGCCGCCGAAAAAGATGGGCGTGTATATGGGGATCTTTAACTTCTTTATCGTGATCCCA
CAGCTGCTCGCGGCCAGTGTTTTAGGCTTAATTCTTAATGGTTTGTTTGATGGTCAACCCATCTACGCCCTGATCACCGG
CGGCGTTCTGATGCTCTGCGCCGGAATTGCCGTGCTCTTTGTTGAGCAACCGAATACTCAGCACACTCAAGCGTAA

Upstream 100 bases:

>100_bases
AAACACGCGTAAAACTGAGCAAAGGCCACTGAATAGGCCACACATTATAACGATAAATGACTCAAGGCAGCCCCGCTGCC
CGCTACTGAAGGGAAGTTGC

Downstream 100 bases:

>100_bases
ACCGCAGATCCTACAACTCAGCACACTTGGCGTTTAGGCGTTTGGGCAACGAAACGCCAAGACGTATAGCCACTTAGCTT
ACAACAAGAATAAATCGCAA

Product: major facilitator transporter

Products: NA

Alternate protein names: Sugar Transporter; Transporter Facilitator Family; Facilitator Superfamily Permease; Facilitator Superfamily Protein; SugarCation Symporter; Facilitator Superfamily Transporter Permease; Cytoplasmic Membrane Maltose Transporter MalY; Transport Protein Facilitator Superfamily Protein; MFS Superfamily Sugcific Permease; Facilitator Superfamily Transmembrane Protein; Facilitator Family Transporter; Sucrose Transporter Protein

Number of amino acids: Translated: 531; Mature: 530

Protein sequence:

>531_residues
MSADQQTVTPLENFSPKVAQRAVHRVQPELNFWQIFNMCFGFLGIQFGFALQNANVSRIFQTLGASIDDIPILWIAAPLT
GLLVQPIIGYLSDNTWGRLGRRRPYFLIGAICTTLAIFVMPHSPTLWIAAGMLWIMDASINIAMEPFRAFVGDNLPPKQR
TQGYAMQSFFIGIGAVVASALPYVLSNYFDVANTAPAGEIADSVRYAFYFGGAVLFLSVAWTVVSTKEYSPDELAAFHGN
ADAGADEQQHRTRTHKNYQFAAIVWMAVGALLTFAVWAQDLDKQLYILTLGIFVFGPLQLYCALRLGKSTPSQRAQLGIV
FNVVDDLFHMPKAMHQLAIVQFFSWFALFAMWIYTTSAVTSYHFGSSDVLSKAYNDGADWVGVLFASYNGFSAIAALFIP
LLAKRIGIKLTHTFNMFCGGFGLISFYFIKDPSLLWLPMIGVGIAWASILSVPYAMLSGALPPKKMGVYMGIFNFFIVIP
QLLAASVLGLILNGLFDGQPIYALITGGVLMLCAGIAVLFVEQPNTQHTQA

Sequences:

>Translated_531_residues
MSADQQTVTPLENFSPKVAQRAVHRVQPELNFWQIFNMCFGFLGIQFGFALQNANVSRIFQTLGASIDDIPILWIAAPLT
GLLVQPIIGYLSDNTWGRLGRRRPYFLIGAICTTLAIFVMPHSPTLWIAAGMLWIMDASINIAMEPFRAFVGDNLPPKQR
TQGYAMQSFFIGIGAVVASALPYVLSNYFDVANTAPAGEIADSVRYAFYFGGAVLFLSVAWTVVSTKEYSPDELAAFHGN
ADAGADEQQHRTRTHKNYQFAAIVWMAVGALLTFAVWAQDLDKQLYILTLGIFVFGPLQLYCALRLGKSTPSQRAQLGIV
FNVVDDLFHMPKAMHQLAIVQFFSWFALFAMWIYTTSAVTSYHFGSSDVLSKAYNDGADWVGVLFASYNGFSAIAALFIP
LLAKRIGIKLTHTFNMFCGGFGLISFYFIKDPSLLWLPMIGVGIAWASILSVPYAMLSGALPPKKMGVYMGIFNFFIVIP
QLLAASVLGLILNGLFDGQPIYALITGGVLMLCAGIAVLFVEQPNTQHTQA
>Mature_530_residues
SADQQTVTPLENFSPKVAQRAVHRVQPELNFWQIFNMCFGFLGIQFGFALQNANVSRIFQTLGASIDDIPILWIAAPLTG
LLVQPIIGYLSDNTWGRLGRRRPYFLIGAICTTLAIFVMPHSPTLWIAAGMLWIMDASINIAMEPFRAFVGDNLPPKQRT
QGYAMQSFFIGIGAVVASALPYVLSNYFDVANTAPAGEIADSVRYAFYFGGAVLFLSVAWTVVSTKEYSPDELAAFHGNA
DAGADEQQHRTRTHKNYQFAAIVWMAVGALLTFAVWAQDLDKQLYILTLGIFVFGPLQLYCALRLGKSTPSQRAQLGIVF
NVVDDLFHMPKAMHQLAIVQFFSWFALFAMWIYTTSAVTSYHFGSSDVLSKAYNDGADWVGVLFASYNGFSAIAALFIPL
LAKRIGIKLTHTFNMFCGGFGLISFYFIKDPSLLWLPMIGVGIAWASILSVPYAMLSGALPPKKMGVYMGIFNFFIVIPQ
LLAASVLGLILNGLFDGQPIYALITGGVLMLCAGIAVLFVEQPNTQHTQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58379; Mature: 58248

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCC
>Mature Secondary Structure 
SADQQTVTPLENFSPKVAQRAVHRVQPELNFWQIFNMCFGFLGIQFGFALQNANVSRIF
CCCCCCCCCHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH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HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA