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The map label for this gene is ydfG [H]

Identifier: 117920374

GI number: 117920374

Start: 2293756

End: 2294205

Strand: Reverse

Name: ydfG [H]

Synonym: Shewana3_1929

Alternate gene names: 117920374

Gene position: 2294205-2293756 (Counterclockwise)

Preceding gene: 117920375

Following gene: 117920370

Centisome position: 46.14

GC content: 53.11

Gene sequence:

>450_bases
ATGTCAGAACGTATTCCGCGCCAACAGATTTACCAACTCCAACCCGAGCTCGCCAAGGCACTCATTAGCCTAGATAAAGC
AGCCGCTGACTCGGCTTTTTCGCCATTATTGGTACATTTAGTCAAACTGAGGGCATCGCAACTCAATGGCTGCGCGTTTT
GTCAGCGAATGCACGCCGAAGAAGCGCGACACGACGGTGAAACCCAGCGCCGTTTAGATTTACTGGCTGCTTGGCACGAA
GTCGATGATCTCTTTGATGCACGGGAGCAAGCGGCGCTGCGCTGGACGGAAACCTTAACCCGCGTCGCCCAATCGCCAGT
GCACGACAGTGAATATACCGCGGTCGCAGAACACTTTTCAGAGAAGGAGATTGTCGATCTCACCAGCCTAATTATCGCCA
TTAATGGTTGGAACCGCATCGCGATCGCCTTCCATCTTCAACCGCTCTAG

Upstream 100 bases:

>100_bases
GCAAACACCGGGGCAATATAAAAAACGCAAGATGTCGCAAATCTCCAATATAACGGCCGATTAATCCCTTAGATTCAAGC
CTCAACTTACAGGAGGCTTT

Downstream 100 bases:

>100_bases
TCGCGCTAAAATTATCGCAAGCCTGTTCTTCAAAGCCAGCAAGGGCACCTACTCTAGTGCCCTCGCTACCTGTACTCGCA
GCAGTCATGTTTTGGCGAGC

Product: alkylhydroperoxidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MSERIPRQQIYQLQPELAKALISLDKAAADSAFSPLLVHLVKLRASQLNGCAFCQRMHAEEARHDGETQRRLDLLAAWHE
VDDLFDAREQAALRWTETLTRVAQSPVHDSEYTAVAEHFSEKEIVDLTSLIIAINGWNRIAIAFHLQPL

Sequences:

>Translated_149_residues
MSERIPRQQIYQLQPELAKALISLDKAAADSAFSPLLVHLVKLRASQLNGCAFCQRMHAEEARHDGETQRRLDLLAAWHE
VDDLFDAREQAALRWTETLTRVAQSPVHDSEYTAVAEHFSEKEIVDLTSLIIAINGWNRIAIAFHLQPL
>Mature_148_residues
SERIPRQQIYQLQPELAKALISLDKAAADSAFSPLLVHLVKLRASQLNGCAFCQRMHAEEARHDGETQRRLDLLAAWHEV
DDLFDAREQAALRWTETLTRVAQSPVHDSEYTAVAEHFSEKEIVDLTSLIIAINGWNRIAIAFHLQPL

Specific function: Unknown

COG id: COG2128

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004675
- InterPro:   IPR003779 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: NA

Molecular weight: Translated: 16909; Mature: 16778

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSERIPRQQIYQLQPELAKALISLDKAAADSAFSPLLVHLVKLRASQLNGCAFCQRMHAE
CCCCCCHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH
EARHDGETQRRLDLLAAWHEVDDLFDAREQAALRWTETLTRVAQSPVHDSEYTAVAEHFS
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC
EKEIVDLTSLIIAINGWNRIAIAFHLQPL
CHHHHHHHHHHHHCCCCCEEEEEEEECCC
>Mature Secondary Structure 
SERIPRQQIYQLQPELAKALISLDKAAADSAFSPLLVHLVKLRASQLNGCAFCQRMHAE
CCCCCHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH
EARHDGETQRRLDLLAAWHEVDDLFDAREQAALRWTETLTRVAQSPVHDSEYTAVAEHFS
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC
EKEIVDLTSLIIAINGWNRIAIAFHLQPL
CHHHHHHHHHHHHCCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]