| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is cga [H]
Identifier: 117920369
GI number: 117920369
Start: 2287223
End: 2289736
Strand: Reverse
Name: cga [H]
Synonym: Shewana3_1924
Alternate gene names: 117920369
Gene position: 2289736-2287223 (Counterclockwise)
Preceding gene: 117920370
Following gene: 117920367
Centisome position: 46.05
GC content: 51.95
Gene sequence:
>2514_bases ATGAATATGGAATCAACAACAGTTCGCAGCTTTTCTGACCGTCGCAACTTAAGCCGTAAGCCGATTGCGCTTGCGATTGC CGCAAGCCTTATCGGCGTTGCCAGCTTAACAGGCTGCTCACCCTCGGCCCCCAATGCAGACGTATCCACACCGACTGTCG CCAAATCCTCAGACGCAAACGTACAGATCGCCCCCGGCGCCCCCGGCAAAGCGCCTACTTGGGCGTTCTCCGGTAAAACA GGGATTGGCACCTCCTATGAGCCTTATACTCACGGGCAATATCAAGATAGTGCCCAAAATCCCATCAGCCGCGTGTGGTT CTCCGTCGCCCAGGGGATTTTAACCGAAACCATGTACGGTCTTATTCACAATGCTCAGCTCAAAGAATTGCAATTTGTGA TCACCGGCAATGGCTTTATCGATACTGAGAAAGACAACACTATCAGCAGCATTGAATACTTAGATACCGACGCCAATGGC CGCCCACAATCCTTGGCCTATAAAATTATCAATCGCGACGTTGAAGGTAAGTATCAGATAGAAAAACATATCTTTACCGA TCCCGACCGCGATACGCTGATGATGCGCGTGACATTTACCGCCTTTGAAGCGGGCATCACACCGCATTTATACGTTAACC CCCATATCGATAATGCGGGCGCGAATGATATTGGTAGAATCGATCATCAAGCTCTTATTGCTCGCACCGCCGATCCCCAC AGCAGCGTGATGACGGTGAAATCGGATATCGATTTTGCGCAGGCGACCACGGGCTTTGTCGGTGTATCCGATGGTTTGGC CGATTTAGCCGATAATGGCAAGCTCGATACCCTTTATCAGGCCACCAGCAGCGCCGAAAATCCGACTCAAGGCAACATTG CCTTTACCGCCAGTTATCCCACACTCCAAGCGAATCAACCTCTTAATGTGAATTTGGCGATTGGTTTTGGCCATGATGAA ACCAGCAGTTTAGCCAATGCCAACGCCAGCTTAACGGCGGGGGATGATGCGGTGCTGAGCCAATACAACGCCGGTTGGCA CAGTTATTTACAATCGCTACCCGCGATGCCTGCTATGGCGCAAAGCACCACAGATAATGGCAAACTGCTGTATACCAGTG CCATGGTACTCAAGGCGCAGGAAGATAAAACCTACGCGGGCGCCCTTATCGCGTCGCTTTCTAATCCTTGGGGCGATACA GTGCCTGCTGTCACACCCAGCACGGGCTACAAGGCCGTTTGGCCACGAGACTTTTACCAGTGCGCCATGGCATTTCTCGC CATGGGCGATACCCAAACGCCTAAAGTCGCCTTTGAGTACCTTAAAAAGGTGCAAGTGAGCGATAAAACTCCAGGCTTTA ACGGCACACCCGGTTGGTTTTTACAAAAGACCCATGTGGATGGCCAAATCGAATGGGTGGGAGTACAGCTCGACCAAACG GCGATGCCGATCATGTTCGGCTGGAAACTCTGGCAGGCAGGTGTGCTGAGTCAAGCAGAACTGAGCCACTGGTATCAAGA GATGTTAAAAGCCGCGGCGGACTTTTTAGTTAGCGGCGGTGAGGTCAATCTCGACTGGAACCACACCCAAATTACGCCAC CGAAAACTCAGCAAGAACGTTGGGAAGAACAAGCAGGTTATTCGCCCTCCACCACGGCCGCAGTTATCGCAGGCTTAGTG GCTGCGAGTGATATTGCCAAGGCAGTAAACGACAGCGATGCTAGTCAGCGTTATTTAGCGACCGCCAAAACGCTTAATCA GCAACTTGAAAAACACTTAGTGACGACCCAAGGTTTGCTTACAGATAGCCAAGGCATTAAGGCGCCTTATTATCTGCGCT TAAGTCCGAATGGTGAGCCAAACACCGCCGAGACACTCGCCGCTAATAATGGTCGAGCGGGATTAGATCAACGTCAGATC CTCGATGGCGGCTTTTTAGAACTGGTGCGCTATGGCGTACGTGGCGCAACCGATAAGCTGATTAATCAAAGCCTAGCGCT GGTGGATAACACCGAACTTGAGGACAATTTACGCCTCAAATACAGCTTTACTGCAAAAGATGGCAGCAGTGTTCCGGGCT TTAGACGTTACGGTAACGATGGCTACGGTGAAGATACCCTCACTGGCGCAAACTACGCCGAATCGGGCAGTAATAGCGAC AACCAACGCGGCCGCGTCTGGCCCTTCTTCACCGGCGAGCGTGGACATTTTGAACTGGCCCTTGCCAGTGCTAAGGGAGA GCTAACGGGGGCAAACGCGCAGCAAACCAAACAGCAGCTTATCAATACCTATGTGCAAGGGATGGAAACCTTCGCCAACG CGGGTCTGATGCTCCCCGAACAAGCATGGGACGGTGTAGGTAACGCCACACGTTACCAATATCAACTCGGCCAAGGCACT AACTCCGCCACCCCGCTCGCCTGGACCCACGCTGAATATATCAAGCTGGTGCGTTCAATGAGCGACGGTCGAGTATGGGA TAACTACCCTATCGTCACAGAAGCGTTGAAATAA
Upstream 100 bases:
>100_bases GTTTAGGCGTTTGGGCAACGAAACGCCAAGACGTATAGCCACTTAGCTTACAACAAGAATAAATCGCAATTAGCACCATC TATTGATTGGGGAGATTTTG
Downstream 100 bases:
>100_bases ATCCTACTCGAGACAATCTAATTGTGTCCTTTAGTGCTGATTAGCACTAAAGGACTCTGTTTGGGAATGCTCTTAAGGGG CTATTTCTAAGGTCTATCTC
Product: glucan 1,4-alpha-glucosidase
Products: NA
Alternate protein names: 1,4-alpha-D-glucan glucohydrolase; Glucan 1,4-alpha-glucosidase [H]
Number of amino acids: Translated: 837; Mature: 837
Protein sequence:
>837_residues MNMESTTVRSFSDRRNLSRKPIALAIAASLIGVASLTGCSPSAPNADVSTPTVAKSSDANVQIAPGAPGKAPTWAFSGKT GIGTSYEPYTHGQYQDSAQNPISRVWFSVAQGILTETMYGLIHNAQLKELQFVITGNGFIDTEKDNTISSIEYLDTDANG RPQSLAYKIINRDVEGKYQIEKHIFTDPDRDTLMMRVTFTAFEAGITPHLYVNPHIDNAGANDIGRIDHQALIARTADPH SSVMTVKSDIDFAQATTGFVGVSDGLADLADNGKLDTLYQATSSAENPTQGNIAFTASYPTLQANQPLNVNLAIGFGHDE TSSLANANASLTAGDDAVLSQYNAGWHSYLQSLPAMPAMAQSTTDNGKLLYTSAMVLKAQEDKTYAGALIASLSNPWGDT VPAVTPSTGYKAVWPRDFYQCAMAFLAMGDTQTPKVAFEYLKKVQVSDKTPGFNGTPGWFLQKTHVDGQIEWVGVQLDQT AMPIMFGWKLWQAGVLSQAELSHWYQEMLKAAADFLVSGGEVNLDWNHTQITPPKTQQERWEEQAGYSPSTTAAVIAGLV AASDIAKAVNDSDASQRYLATAKTLNQQLEKHLVTTQGLLTDSQGIKAPYYLRLSPNGEPNTAETLAANNGRAGLDQRQI LDGGFLELVRYGVRGATDKLINQSLALVDNTELEDNLRLKYSFTAKDGSSVPGFRRYGNDGYGEDTLTGANYAESGSNSD NQRGRVWPFFTGERGHFELALASAKGELTGANAQQTKQQLINTYVQGMETFANAGLMLPEQAWDGVGNATRYQYQLGQGT NSATPLAWTHAEYIKLVRSMSDGRVWDNYPIVTEALK
Sequences:
>Translated_837_residues MNMESTTVRSFSDRRNLSRKPIALAIAASLIGVASLTGCSPSAPNADVSTPTVAKSSDANVQIAPGAPGKAPTWAFSGKT GIGTSYEPYTHGQYQDSAQNPISRVWFSVAQGILTETMYGLIHNAQLKELQFVITGNGFIDTEKDNTISSIEYLDTDANG RPQSLAYKIINRDVEGKYQIEKHIFTDPDRDTLMMRVTFTAFEAGITPHLYVNPHIDNAGANDIGRIDHQALIARTADPH SSVMTVKSDIDFAQATTGFVGVSDGLADLADNGKLDTLYQATSSAENPTQGNIAFTASYPTLQANQPLNVNLAIGFGHDE TSSLANANASLTAGDDAVLSQYNAGWHSYLQSLPAMPAMAQSTTDNGKLLYTSAMVLKAQEDKTYAGALIASLSNPWGDT VPAVTPSTGYKAVWPRDFYQCAMAFLAMGDTQTPKVAFEYLKKVQVSDKTPGFNGTPGWFLQKTHVDGQIEWVGVQLDQT AMPIMFGWKLWQAGVLSQAELSHWYQEMLKAAADFLVSGGEVNLDWNHTQITPPKTQQERWEEQAGYSPSTTAAVIAGLV AASDIAKAVNDSDASQRYLATAKTLNQQLEKHLVTTQGLLTDSQGIKAPYYLRLSPNGEPNTAETLAANNGRAGLDQRQI LDGGFLELVRYGVRGATDKLINQSLALVDNTELEDNLRLKYSFTAKDGSSVPGFRRYGNDGYGEDTLTGANYAESGSNSD NQRGRVWPFFTGERGHFELALASAKGELTGANAQQTKQQLINTYVQGMETFANAGLMLPEQAWDGVGNATRYQYQLGQGT NSATPLAWTHAEYIKLVRSMSDGRVWDNYPIVTEALK >Mature_837_residues MNMESTTVRSFSDRRNLSRKPIALAIAASLIGVASLTGCSPSAPNADVSTPTVAKSSDANVQIAPGAPGKAPTWAFSGKT GIGTSYEPYTHGQYQDSAQNPISRVWFSVAQGILTETMYGLIHNAQLKELQFVITGNGFIDTEKDNTISSIEYLDTDANG RPQSLAYKIINRDVEGKYQIEKHIFTDPDRDTLMMRVTFTAFEAGITPHLYVNPHIDNAGANDIGRIDHQALIARTADPH SSVMTVKSDIDFAQATTGFVGVSDGLADLADNGKLDTLYQATSSAENPTQGNIAFTASYPTLQANQPLNVNLAIGFGHDE TSSLANANASLTAGDDAVLSQYNAGWHSYLQSLPAMPAMAQSTTDNGKLLYTSAMVLKAQEDKTYAGALIASLSNPWGDT VPAVTPSTGYKAVWPRDFYQCAMAFLAMGDTQTPKVAFEYLKKVQVSDKTPGFNGTPGWFLQKTHVDGQIEWVGVQLDQT AMPIMFGWKLWQAGVLSQAELSHWYQEMLKAAADFLVSGGEVNLDWNHTQITPPKTQQERWEEQAGYSPSTTAAVIAGLV AASDIAKAVNDSDASQRYLATAKTLNQQLEKHLVTTQGLLTDSQGIKAPYYLRLSPNGEPNTAETLAANNGRAGLDQRQI LDGGFLELVRYGVRGATDKLINQSLALVDNTELEDNLRLKYSFTAKDGSSVPGFRRYGNDGYGEDTLTGANYAESGSNSD NQRGRVWPFFTGERGHFELALASAKGELTGANAQQTKQQLINTYVQGMETFANAGLMLPEQAWDGVGNATRYQYQLGQGT NSATPLAWTHAEYIKLVRSMSDGRVWDNYPIVTEALK
Specific function: CGA has typical kinetic properties for a glucoamylase, but this bacterial enzyme had higher isomaltose-hydrolyzing activity than other eukaryotic glucoamylases [H]
COG id: COG3387
COG function: function code G; Glucoamylase and related glycosyl hydrolases
Gene ontology:
Cell location: Cell membrane; Lipid-anchor [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 15 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR012341 - InterPro: IPR006425 - InterPro: IPR015220 - InterPro: IPR011013 - InterPro: IPR014718 - InterPro: IPR000165 - InterPro: IPR011613 [H]
Pfam domain/function: PF09137 Glucodextran_N; PF00723 Glyco_hydro_15 [H]
EC number: =3.2.1.3 [H]
Molecular weight: Translated: 90666; Mature: 90666
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMESTTVRSFSDRRNLSRKPIALAIAASLIGVASLTGCSPSAPNADVSTPTVAKSSDAN CCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCC VQIAPGAPGKAPTWAFSGKTGIGTSYEPYTHGQYQDSAQNPISRVWFSVAQGILTETMYG EEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LIHNAQLKELQFVITGNGFIDTEKDNTISSIEYLDTDANGRPQSLAYKIINRDVEGKYQI HHCCCCEEEEEEEEECCCEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCEEE EKHIFTDPDRDTLMMRVTFTAFEAGITPHLYVNPHIDNAGANDIGRIDHQALIARTADPH EECCCCCCCCCEEEEEEEEEHHHCCCCCEEEECCCCCCCCCCCHHHCCCHHHEEECCCCC SSVMTVKSDIDFAQATTGFVGVSDGLADLADNGKLDTLYQATSSAENPTQGNIAFTASYP CCEEEEECCCCHHHHCCCCEECCCCHHHHHCCCCCHHHHHHHCCCCCCCCCCEEEEECCC TLQANQPLNVNLAIGFGHDETSSLANANASLTAGDDAVLSQYNAGWHSYLQSLPAMPAMA CEECCCCEEEEEEEECCCCCHHHHHCCCCEEECCCHHHHHHHCCCHHHHHHHCCCCCHHH QSTTDNGKLLYTSAMVLKAQEDKTYAGALIASLSNPWGDTVPAVTPSTGYKAVWPRDFYQ HCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCHHHHH CAMAFLAMGDTQTPKVAFEYLKKVQVSDKTPGFNGTPGWFLQKTHVDGQIEWVGVQLDQT HHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCEEEEEEEEECCC AMPIMFGWKLWQAGVLSQAELSHWYQEMLKAAADFLVSGGEVNLDWNHTQITPPKTQQER CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHH WEEQAGYSPSTTAAVIAGLVAASDIAKAVNDSDASQRYLATAKTLNQQLEKHLVTTQGLL HHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCE TDSQGIKAPYYLRLSPNGEPNTAETLAANNGRAGLDQRQILDGGFLELVRYGVRGATDKL ECCCCCCCCEEEEECCCCCCCCHHHEECCCCCCCCCHHHHHCCHHHHHHHHHCCCHHHHH INQSLALVDNTELEDNLRLKYSFTAKDGSSVPGFRRYGNDGYGEDTLTGANYAESGSNSD HCCCEEEEECCCCCCCEEEEEEEECCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCC NQRGRVWPFFTGERGHFELALASAKGELTGANAQQTKQQLINTYVQGMETFANAGLMLPE CCCCCEEEEECCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCH QAWDGVGNATRYQYQLGQGTNSATPLAWTHAEYIKLVRSMSDGRVWDNYPIVTEALK HHHCCCCCCEEEEEEECCCCCCCCCEEEHHHHHHHHHHHCCCCCEECCCCCHHHHCC >Mature Secondary Structure MNMESTTVRSFSDRRNLSRKPIALAIAASLIGVASLTGCSPSAPNADVSTPTVAKSSDAN CCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCC VQIAPGAPGKAPTWAFSGKTGIGTSYEPYTHGQYQDSAQNPISRVWFSVAQGILTETMYG EEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LIHNAQLKELQFVITGNGFIDTEKDNTISSIEYLDTDANGRPQSLAYKIINRDVEGKYQI HHCCCCEEEEEEEEECCCEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCEEE EKHIFTDPDRDTLMMRVTFTAFEAGITPHLYVNPHIDNAGANDIGRIDHQALIARTADPH EECCCCCCCCCEEEEEEEEEHHHCCCCCEEEECCCCCCCCCCCHHHCCCHHHEEECCCCC SSVMTVKSDIDFAQATTGFVGVSDGLADLADNGKLDTLYQATSSAENPTQGNIAFTASYP CCEEEEECCCCHHHHCCCCEECCCCHHHHHCCCCCHHHHHHHCCCCCCCCCCEEEEECCC TLQANQPLNVNLAIGFGHDETSSLANANASLTAGDDAVLSQYNAGWHSYLQSLPAMPAMA CEECCCCEEEEEEEECCCCCHHHHHCCCCEEECCCHHHHHHHCCCHHHHHHHCCCCCHHH QSTTDNGKLLYTSAMVLKAQEDKTYAGALIASLSNPWGDTVPAVTPSTGYKAVWPRDFYQ HCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCHHHHH CAMAFLAMGDTQTPKVAFEYLKKVQVSDKTPGFNGTPGWFLQKTHVDGQIEWVGVQLDQT HHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCEEEEEEEEECCC AMPIMFGWKLWQAGVLSQAELSHWYQEMLKAAADFLVSGGEVNLDWNHTQITPPKTQQER CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHH WEEQAGYSPSTTAAVIAGLVAASDIAKAVNDSDASQRYLATAKTLNQQLEKHLVTTQGLL HHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCE TDSQGIKAPYYLRLSPNGEPNTAETLAANNGRAGLDQRQILDGGFLELVRYGVRGATDKL ECCCCCCCCEEEEECCCCCCCCHHHEECCCCCCCCCHHHHHCCHHHHHHHHHCCCHHHHH INQSLALVDNTELEDNLRLKYSFTAKDGSSVPGFRRYGNDGYGEDTLTGANYAESGSNSD HCCCEEEEECCCCCCCEEEEEEEECCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCC NQRGRVWPFFTGERGHFELALASAKGELTGANAQQTKQQLINTYVQGMETFANAGLMLPE CCCCCEEEEECCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCH QAWDGVGNATRYQYQLGQGTNSATPLAWTHAEYIKLVRSMSDGRVWDNYPIVTEALK HHHCCCCCCEEEEEEECCCCCCCCCEEEHHHHHHHHHHHCCCCCEECCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1633799 [H]