| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117920370
Identifier: 117920370
GI number: 117920370
Start: 2289868
End: 2291463
Strand: Reverse
Name: 117920370
Synonym: Shewana3_1925
Alternate gene names: NA
Gene position: 2291463-2289868 (Counterclockwise)
Preceding gene: 117920374
Following gene: 117920369
Centisome position: 46.09
GC content: 50.94
Gene sequence:
>1596_bases ATGTCCGCGGATCAACAAACGGTTACCCCATTAGAGAATTTCTCGCCCAAGGTGGCGCAGCGCGCCGTACATAGGGTGCA ACCCGAGCTGAATTTCTGGCAAATCTTCAATATGTGCTTTGGCTTTTTGGGGATCCAATTCGGCTTCGCCCTGCAAAATG CCAACGTCAGCCGCATTTTCCAAACCCTTGGCGCCTCTATCGATGATATCCCCATCCTGTGGATTGCCGCACCGTTAACG GGTCTGCTGGTTCAACCTATTATTGGTTATCTTAGCGATAACACATGGGGGCGTTTAGGTCGCCGCCGGCCGTATTTTTT AATCGGCGCCATTTGTACGACTCTTGCGATTTTTGTGATGCCACATTCCCCGACGTTATGGATTGCCGCAGGCATGCTGT GGATTATGGATGCCTCAATCAATATCGCCATGGAACCCTTCCGTGCCTTTGTGGGGGATAATTTGCCTCCCAAACAGCGC ACCCAAGGCTATGCCATGCAAAGCTTTTTTATCGGCATCGGCGCGGTTGTTGCCTCGGCCCTGCCCTATGTTCTCAGCAA CTACTTTGATGTCGCCAATACGGCGCCCGCGGGTGAAATCGCCGATTCGGTGCGTTATGCCTTCTATTTTGGTGGTGCCG TGCTGTTTCTCAGCGTGGCTTGGACTGTTGTGTCCACCAAAGAATATTCCCCCGATGAACTCGCCGCCTTCCATGGCAAT GCTGACGCAGGCGCAGATGAGCAACAACATCGCACTCGTACCCATAAGAATTATCAATTTGCCGCTATCGTTTGGATGGC TGTAGGCGCATTACTGACTTTTGCAGTGTGGGCACAGGATTTAGATAAGCAGCTGTATATTTTAACCTTAGGGATTTTTG TCTTTGGCCCATTGCAACTTTACTGCGCCCTGCGTTTAGGCAAATCAACGCCCTCACAACGCGCGCAACTGGGCATTGTC TTTAATGTGGTCGACGATTTATTCCATATGCCGAAGGCCATGCATCAGTTAGCGATAGTGCAGTTTTTCTCTTGGTTCGC GCTCTTTGCGATGTGGATTTACACCACCTCGGCGGTGACGTCCTACCATTTTGGCAGCAGCGATGTGTTGTCTAAGGCCT ATAACGATGGCGCCGATTGGGTGGGCGTACTGTTCGCCTCCTACAATGGATTTTCGGCCATTGCGGCCCTGTTTATCCCG CTACTGGCTAAACGTATCGGTATCAAACTGACCCACACCTTTAATATGTTCTGCGGCGGTTTTGGCTTGATCAGTTTCTA TTTTATTAAAGATCCCAGTCTGTTATGGCTGCCTATGATTGGCGTGGGTATCGCCTGGGCTTCGATTCTCTCCGTGCCCT ACGCCATGTTATCCGGCGCCTTGCCGCCGAAAAAGATGGGCGTGTATATGGGGATCTTTAACTTCTTTATCGTGATCCCA CAGCTGCTCGCGGCCAGTGTTTTAGGCTTAATTCTTAATGGTTTGTTTGATGGTCAACCCATCTACGCCCTGATCACCGG CGGCGTTCTGATGCTCTGCGCCGGAATTGCCGTGCTCTTTGTTGAGCAACCGAATACTCAGCACACTCAAGCGTAA
Upstream 100 bases:
>100_bases AAACACGCGTAAAACTGAGCAAAGGCCACTGAATAGGCCACACATTATAACGATAAATGACTCAAGGCAGCCCCGCTGCC CGCTACTGAAGGGAAGTTGC
Downstream 100 bases:
>100_bases ACCGCAGATCCTACAACTCAGCACACTTGGCGTTTAGGCGTTTGGGCAACGAAACGCCAAGACGTATAGCCACTTAGCTT ACAACAAGAATAAATCGCAA
Product: major facilitator transporter
Products: NA
Alternate protein names: Sugar Transporter; Transporter Facilitator Family; Facilitator Superfamily Permease; Facilitator Superfamily Protein; SugarCation Symporter; Facilitator Superfamily Transporter Permease; Cytoplasmic Membrane Maltose Transporter MalY; Transport Protein Facilitator Superfamily Protein; MFS Superfamily Sugcific Permease; Facilitator Superfamily Transmembrane Protein; Facilitator Family Transporter; Sucrose Transporter Protein
Number of amino acids: Translated: 531; Mature: 530
Protein sequence:
>531_residues MSADQQTVTPLENFSPKVAQRAVHRVQPELNFWQIFNMCFGFLGIQFGFALQNANVSRIFQTLGASIDDIPILWIAAPLT GLLVQPIIGYLSDNTWGRLGRRRPYFLIGAICTTLAIFVMPHSPTLWIAAGMLWIMDASINIAMEPFRAFVGDNLPPKQR TQGYAMQSFFIGIGAVVASALPYVLSNYFDVANTAPAGEIADSVRYAFYFGGAVLFLSVAWTVVSTKEYSPDELAAFHGN ADAGADEQQHRTRTHKNYQFAAIVWMAVGALLTFAVWAQDLDKQLYILTLGIFVFGPLQLYCALRLGKSTPSQRAQLGIV FNVVDDLFHMPKAMHQLAIVQFFSWFALFAMWIYTTSAVTSYHFGSSDVLSKAYNDGADWVGVLFASYNGFSAIAALFIP LLAKRIGIKLTHTFNMFCGGFGLISFYFIKDPSLLWLPMIGVGIAWASILSVPYAMLSGALPPKKMGVYMGIFNFFIVIP QLLAASVLGLILNGLFDGQPIYALITGGVLMLCAGIAVLFVEQPNTQHTQA
Sequences:
>Translated_531_residues MSADQQTVTPLENFSPKVAQRAVHRVQPELNFWQIFNMCFGFLGIQFGFALQNANVSRIFQTLGASIDDIPILWIAAPLT GLLVQPIIGYLSDNTWGRLGRRRPYFLIGAICTTLAIFVMPHSPTLWIAAGMLWIMDASINIAMEPFRAFVGDNLPPKQR TQGYAMQSFFIGIGAVVASALPYVLSNYFDVANTAPAGEIADSVRYAFYFGGAVLFLSVAWTVVSTKEYSPDELAAFHGN ADAGADEQQHRTRTHKNYQFAAIVWMAVGALLTFAVWAQDLDKQLYILTLGIFVFGPLQLYCALRLGKSTPSQRAQLGIV FNVVDDLFHMPKAMHQLAIVQFFSWFALFAMWIYTTSAVTSYHFGSSDVLSKAYNDGADWVGVLFASYNGFSAIAALFIP LLAKRIGIKLTHTFNMFCGGFGLISFYFIKDPSLLWLPMIGVGIAWASILSVPYAMLSGALPPKKMGVYMGIFNFFIVIP QLLAASVLGLILNGLFDGQPIYALITGGVLMLCAGIAVLFVEQPNTQHTQA >Mature_530_residues SADQQTVTPLENFSPKVAQRAVHRVQPELNFWQIFNMCFGFLGIQFGFALQNANVSRIFQTLGASIDDIPILWIAAPLTG LLVQPIIGYLSDNTWGRLGRRRPYFLIGAICTTLAIFVMPHSPTLWIAAGMLWIMDASINIAMEPFRAFVGDNLPPKQRT QGYAMQSFFIGIGAVVASALPYVLSNYFDVANTAPAGEIADSVRYAFYFGGAVLFLSVAWTVVSTKEYSPDELAAFHGNA DAGADEQQHRTRTHKNYQFAAIVWMAVGALLTFAVWAQDLDKQLYILTLGIFVFGPLQLYCALRLGKSTPSQRAQLGIVF NVVDDLFHMPKAMHQLAIVQFFSWFALFAMWIYTTSAVTSYHFGSSDVLSKAYNDGADWVGVLFASYNGFSAIAALFIPL LAKRIGIKLTHTFNMFCGGFGLISFYFIKDPSLLWLPMIGVGIAWASILSVPYAMLSGALPPKKMGVYMGIFNFFIVIPQ LLAASVLGLILNGLFDGQPIYALITGGVLMLCAGIAVLFVEQPNTQHTQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58379; Mature: 58248
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSADQQTVTPLENFSPKVAQRAVHRVQPELNFWQIFNMCFGFLGIQFGFALQNANVSRIF CCCCCCCCCCHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH QTLGASIDDIPILWIAAPLTGLLVQPIIGYLSDNTWGRLGRRRPYFLIGAICTTLAIFVM HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHC PHSPTLWIAAGMLWIMDASINIAMEPFRAFVGDNLPPKQRTQGYAMQSFFIGIGAVVASA CCCCHHHHHHHHHHHEECCCHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHH LPYVLSNYFDVANTAPAGEIADSVRYAFYFGGAVLFLSVAWTVVSTKEYSPDELAAFHGN HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCC ADAGADEQQHRTRTHKNYQFAAIVWMAVGALLTFAVWAQDLDKQLYILTLGIFVFGPLQL CCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH YCALRLGKSTPSQRAQLGIVFNVVDDLFHMPKAMHQLAIVQFFSWFALFAMWIYTTSAVT HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SYHFGSSDVLSKAYNDGADWVGVLFASYNGFSAIAALFIPLLAKRIGIKLTHTFNMFCGG HCCCCCHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCEEEEEEHHHHHHH FGLISFYFIKDPSLLWLPMIGVGIAWASILSVPYAMLSGALPPKKMGVYMGIFNFFIVIP HHHHHEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH QLLAASVLGLILNGLFDGQPIYALITGGVLMLCAGIAVLFVEQPNTQHTQA HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCC >Mature Secondary Structure SADQQTVTPLENFSPKVAQRAVHRVQPELNFWQIFNMCFGFLGIQFGFALQNANVSRIF CCCCCCCCCHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH QTLGASIDDIPILWIAAPLTGLLVQPIIGYLSDNTWGRLGRRRPYFLIGAICTTLAIFVM HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHC PHSPTLWIAAGMLWIMDASINIAMEPFRAFVGDNLPPKQRTQGYAMQSFFIGIGAVVASA CCCCHHHHHHHHHHHEECCCHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHH LPYVLSNYFDVANTAPAGEIADSVRYAFYFGGAVLFLSVAWTVVSTKEYSPDELAAFHGN HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCC ADAGADEQQHRTRTHKNYQFAAIVWMAVGALLTFAVWAQDLDKQLYILTLGIFVFGPLQL CCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH YCALRLGKSTPSQRAQLGIVFNVVDDLFHMPKAMHQLAIVQFFSWFALFAMWIYTTSAVT HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SYHFGSSDVLSKAYNDGADWVGVLFASYNGFSAIAALFIPLLAKRIGIKLTHTFNMFCGG HCCCCCHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCEEEEEEHHHHHHH FGLISFYFIKDPSLLWLPMIGVGIAWASILSVPYAMLSGALPPKKMGVYMGIFNFFIVIP HHHHHEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH QLLAASVLGLILNGLFDGQPIYALITGGVLMLCAGIAVLFVEQPNTQHTQA HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA