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The map label for this gene is pheT [H]

Identifier: 117920309

GI number: 117920309

Start: 2208269

End: 2210656

Strand: Direct

Name: pheT [H]

Synonym: Shewana3_1864

Alternate gene names: 117920309

Gene position: 2208269-2210656 (Clockwise)

Preceding gene: 117920308

Following gene: 117920310

Centisome position: 44.41

GC content: 48.74

Gene sequence:

>2388_bases
ATGAAATTTAGCGAATCTTGGCTTCGTGAGTGGGTCAATCCTGCCGTTAGCCGTGAAGCATTATCCCACCAGATCACTAT
GGCTGGCCTCGAAGTCGATGGCGTTGATGCCGTGGCTGCCGAGTTCAGCGGCGTTGTGATTGGTGAAGTGGTCGAATGTG
GCCAGCACCCAGATGCAGACAAACTGCGCGTGACTAAAGTCAGTGTCGGCAGTGGTGAACTTATCGATATCGTCTGTGGC
GCACCAAACTGCCGCCAAGGCCTGCGCGTTGCCGTTGCCATGGTTGGCGCTGTATTGCCAGGCGATTTTAAAATTAAAAA
GGCTAAGCTGCGTGGTATGCCTTCAGAAGGTATGCTGTGTTCATACAGCGAGCTGGGTATCGACATCGACAGCGATGGCA
TTATCGAACTGCCATTAGATGCGCCATTAGGCACGGATTTACGTGAGTATCTCCAGCTTGATGACGCTGTGATTGAAGTG
GATTTAACCGCTAACCGTGCCGACTGTTTAGGCATGGTGGGTCTGGCCCGTGAAGTAGGCGTGTTAAACCGTGCTGCTGT
GACTGAGCCACAATGGCAAGCCGTTACGCCAACGATTGATGCCAAAGTGGCTATCAATGTGAAGGAAAGCGCAGCGTGCC
CACGCTACTTAGGTCGTGTGGTGAAGAATGTAAACGTGAAAGCTGCTACGCCATTATGGATGCAGGAAAAACTGCGCCGC
AGCGGTATCCGTTCTATCGATCCTATCGTCGATATCACTAACTTCGTGTTAGTTGAATTCGGCCAACCTATGCACGCCTT
CGACCTTGCCAAGCTGACTGGCGACATCCAAGTGCGTTTGGGGAATGGCGAAGAGAAAATCACTCTGCTCGATGGCAGCG
AAGTGACCATTCCAAGCGATACCTTAGTGATTGCCGACAATGTTTGCCCATTAGCGCTTGCTGGCGTATTTGGCGGCGAA
TACTCGGGTGTGAGTGACACCACGCAAGACATTCTGCTGGAATGTGCCTTCTTCGCACCGTTAGCTATTATGGGTAAATC
ACGCCGTTTAGGTCTGCATACCGATTCATCACACCGTTTTGAACGTGGTGTTGACCCTGAGATGCAGCACAAGGTTATGG
ACCGTGCGACTCGCTTAGTGCTTGATATTTGCGGTGGTGAAGCGGGTCCTGTGGTTGAAGCGAAATCTGACGCTGACTTA
CCAAAGCCTGCGCAAATCCTATTGCGTCGCAGCAAGTTAGATAAAATTTTGGGTCACCATGTTCCCGATAGCGACGTGGT
TGAAATCCTTGAACGTTTAGGTTTTGGAGTAGTTGCAGGCGAGGGTAGCTGGCAGGTCACAACCGCCACTTACCGCTTCG
ATATGGCGATTGAAGAAGACTTAATCGAAGAAGTGGCCCGTATCTACGGTTACAACAACATTCCAAACGTTGCGCCTGTG
GCGTCACTGCGGATGTCAGACCATAAAGAAACCGATTTAAGCCTCAAGCGCGTACGTTCGCTGTTAGTGGCCCGTGGTTT
CCAAGAAGCCGTGACTTACAGTTTCGTCGATCCTAAGCTGCAAAATCTGGTTCACCCAGGCGAGCAAGCCATGGTGTTGC
CGAACCCAATTTCTAGCGAAATGTCGGCCATGCGTTTGTCGATGTTCACAGGATTATTGACTGCGGTTGGCTACAACCAA
AGTCGTCAACAGGGTCGTGTGAGACTTTTTGAAACTGGCCTGCGCTTTGTTCCTGATATTAATGCAGAATCAGGTGTAAG
ACAGCAAGCTATGCTCGGTTGCATCATAACTGGCCTCCAAAATGACGAACATTGGGCTATGGAATCGAAAACTGTTGATT
TTTTCGACCTTAAAGGCGATTTAGAAGCAATTATCGGCTTGACAGTTTCCGCATCAGAATTTAGCTTTAGAGTAGCGACG
CATTCTGCTCTTCATCCAGGGCAATGTGCTGAAATATTGAGAAATGATCGAGTGATCGGTCATATAGGTGCTATCCATCC
TAGTTTGGAGAAGCCTTTTGGACTCAATGGTAAAACCATCGTTTTTGAGTTGGAATTGGATGCTTTATTGCATACCAGTT
TACCGCTAGCCCAAGCTGTATCTAAGTTCCCGGCTAATCGTCGTGACATCGCAGTAGTCGTAGATGAAAGTGTATCTGCA
GGCGATGTAATGAAATTGATAAGAAAAGTTGGCGAAAATCAGTTGGTTGGCATAAACTTGTTCGATGTATACTTAGGTAA
AGGTGTTGAGCCCGGCAAGAAGAGCTTGGCGATAGCACTTACATTACAAGACACTACTCGTACACTTGAGGAAAAAGAGA
TCGCTGAGACAGTAGAATCAGTTGTTTCTGCCCTGAAGACCGAGTTCAACGCATCGTTGAGGGATTAA

Upstream 100 bases:

>100_bases
AGCGTTTAACTATGCTGCGTTACGGCGTAAACGATCTACGTGCGTTTTTCGAAAACGACCTGCGTTTCCTGAAGCAATTT
AAATAACGGAGCTGTATAGC

Downstream 100 bases:

>100_bases
AGTATGGCACTTACCAAAGCCGAAATGGCAGAACATCTTTTTGAAACACTAGGCATTAACAAGCGTGTAGCTAAAGAGAT
GGTTGAGTCGTTCTTTGAAG

Product: phenylalanyl-tRNA synthetase subunit beta

Products: NA

Alternate protein names: Phenylalanine--tRNA ligase beta chain; PheRS [H]

Number of amino acids: Translated: 795; Mature: 795

Protein sequence:

>795_residues
MKFSESWLREWVNPAVSREALSHQITMAGLEVDGVDAVAAEFSGVVIGEVVECGQHPDADKLRVTKVSVGSGELIDIVCG
APNCRQGLRVAVAMVGAVLPGDFKIKKAKLRGMPSEGMLCSYSELGIDIDSDGIIELPLDAPLGTDLREYLQLDDAVIEV
DLTANRADCLGMVGLAREVGVLNRAAVTEPQWQAVTPTIDAKVAINVKESAACPRYLGRVVKNVNVKAATPLWMQEKLRR
SGIRSIDPIVDITNFVLVEFGQPMHAFDLAKLTGDIQVRLGNGEEKITLLDGSEVTIPSDTLVIADNVCPLALAGVFGGE
YSGVSDTTQDILLECAFFAPLAIMGKSRRLGLHTDSSHRFERGVDPEMQHKVMDRATRLVLDICGGEAGPVVEAKSDADL
PKPAQILLRRSKLDKILGHHVPDSDVVEILERLGFGVVAGEGSWQVTTATYRFDMAIEEDLIEEVARIYGYNNIPNVAPV
ASLRMSDHKETDLSLKRVRSLLVARGFQEAVTYSFVDPKLQNLVHPGEQAMVLPNPISSEMSAMRLSMFTGLLTAVGYNQ
SRQQGRVRLFETGLRFVPDINAESGVRQQAMLGCIITGLQNDEHWAMESKTVDFFDLKGDLEAIIGLTVSASEFSFRVAT
HSALHPGQCAEILRNDRVIGHIGAIHPSLEKPFGLNGKTIVFELELDALLHTSLPLAQAVSKFPANRRDIAVVVDESVSA
GDVMKLIRKVGENQLVGINLFDVYLGKGVEPGKKSLAIALTLQDTTRTLEEKEIAETVESVVSALKTEFNASLRD

Sequences:

>Translated_795_residues
MKFSESWLREWVNPAVSREALSHQITMAGLEVDGVDAVAAEFSGVVIGEVVECGQHPDADKLRVTKVSVGSGELIDIVCG
APNCRQGLRVAVAMVGAVLPGDFKIKKAKLRGMPSEGMLCSYSELGIDIDSDGIIELPLDAPLGTDLREYLQLDDAVIEV
DLTANRADCLGMVGLAREVGVLNRAAVTEPQWQAVTPTIDAKVAINVKESAACPRYLGRVVKNVNVKAATPLWMQEKLRR
SGIRSIDPIVDITNFVLVEFGQPMHAFDLAKLTGDIQVRLGNGEEKITLLDGSEVTIPSDTLVIADNVCPLALAGVFGGE
YSGVSDTTQDILLECAFFAPLAIMGKSRRLGLHTDSSHRFERGVDPEMQHKVMDRATRLVLDICGGEAGPVVEAKSDADL
PKPAQILLRRSKLDKILGHHVPDSDVVEILERLGFGVVAGEGSWQVTTATYRFDMAIEEDLIEEVARIYGYNNIPNVAPV
ASLRMSDHKETDLSLKRVRSLLVARGFQEAVTYSFVDPKLQNLVHPGEQAMVLPNPISSEMSAMRLSMFTGLLTAVGYNQ
SRQQGRVRLFETGLRFVPDINAESGVRQQAMLGCIITGLQNDEHWAMESKTVDFFDLKGDLEAIIGLTVSASEFSFRVAT
HSALHPGQCAEILRNDRVIGHIGAIHPSLEKPFGLNGKTIVFELELDALLHTSLPLAQAVSKFPANRRDIAVVVDESVSA
GDVMKLIRKVGENQLVGINLFDVYLGKGVEPGKKSLAIALTLQDTTRTLEEKEIAETVESVVSALKTEFNASLRD
>Mature_795_residues
MKFSESWLREWVNPAVSREALSHQITMAGLEVDGVDAVAAEFSGVVIGEVVECGQHPDADKLRVTKVSVGSGELIDIVCG
APNCRQGLRVAVAMVGAVLPGDFKIKKAKLRGMPSEGMLCSYSELGIDIDSDGIIELPLDAPLGTDLREYLQLDDAVIEV
DLTANRADCLGMVGLAREVGVLNRAAVTEPQWQAVTPTIDAKVAINVKESAACPRYLGRVVKNVNVKAATPLWMQEKLRR
SGIRSIDPIVDITNFVLVEFGQPMHAFDLAKLTGDIQVRLGNGEEKITLLDGSEVTIPSDTLVIADNVCPLALAGVFGGE
YSGVSDTTQDILLECAFFAPLAIMGKSRRLGLHTDSSHRFERGVDPEMQHKVMDRATRLVLDICGGEAGPVVEAKSDADL
PKPAQILLRRSKLDKILGHHVPDSDVVEILERLGFGVVAGEGSWQVTTATYRFDMAIEEDLIEEVARIYGYNNIPNVAPV
ASLRMSDHKETDLSLKRVRSLLVARGFQEAVTYSFVDPKLQNLVHPGEQAMVLPNPISSEMSAMRLSMFTGLLTAVGYNQ
SRQQGRVRLFETGLRFVPDINAESGVRQQAMLGCIITGLQNDEHWAMESKTVDFFDLKGDLEAIIGLTVSASEFSFRVAT
HSALHPGQCAEILRNDRVIGHIGAIHPSLEKPFGLNGKTIVFELELDALLHTSLPLAQAVSKFPANRRDIAVVVDESVSA
GDVMKLIRKVGENQLVGINLFDVYLGKGVEPGKKSLAIALTLQDTTRTLEEKEIAETVESVVSALKTEFNASLRD

Specific function: Unknown

COG id: COG0072

COG function: function code J; Phenylalanyl-tRNA synthetase beta subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 tRNA-binding domain [H]

Homologues:

Organism=Homo sapiens, GI124028525, Length=581, Percent_Identity=21.8588640275387, Blast_Score=83, Evalue=1e-15,
Organism=Escherichia coli, GI1788006, Length=795, Percent_Identity=63.1446540880503, Blast_Score=1016, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17533403, Length=567, Percent_Identity=22.2222222222222, Blast_Score=78, Evalue=2e-14,
Organism=Drosophila melanogaster, GI21355211, Length=578, Percent_Identity=20.9342560553633, Blast_Score=76, Evalue=1e-13,

Paralogues:

None

Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005146
- InterPro:   IPR005147
- InterPro:   IPR009061
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004532
- InterPro:   IPR020825
- InterPro:   IPR005121
- InterPro:   IPR002547 [H]

Pfam domain/function: PF03483 B3_4; PF03484 B5; PF03147 FDX-ACB; PF01588 tRNA_bind [H]

EC number: =6.1.1.20 [H]

Molecular weight: Translated: 86353; Mature: 86353

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: PS50886 TRBD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFSESWLREWVNPAVSREALSHQITMAGLEVDGVDAVAAEFSGVVIGEVVECGQHPDAD
CCCCHHHHHHHHCHHHHHHHHHHEEEEEECEECCCHHHHHHHCCCHHHHHHHCCCCCCCC
KLRVTKVSVGSGELIDIVCGAPNCRQGLRVAVAMVGAVLPGDFKIKKAKLRGMPSEGMLC
CEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEHHHHCCCCCCCCEE
SYSELGIDIDSDGIIELPLDAPLGTDLREYLQLDDAVIEVDLTANRADCLGMVGLAREVG
EHHHHCEEECCCCEEEECCCCCCCCCHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHH
VLNRAAVTEPQWQAVTPTIDAKVAINVKESAACPRYLGRVVKNVNVKAATPLWMQEKLRR
HHHHHHCCCCCCEEECCCCCCEEEEEEHHHCCCHHHHHHHHHCCCCEECCCHHHHHHHHH
SGIRSIDPIVDITNFVLVEFGQPMHAFDLAKLTGDIQVRLGNGEEKITLLDGSEVTIPSD
CCCCCCCHHHHHHHHHEEECCCCHHHHHHHHCCCEEEEEECCCCCEEEEECCCEEECCCC
TLVIADNVCPLALAGVFGGEYSGVSDTTQDILLECAFFAPLAIMGKSRRLGLHTDSSHRF
CEEEECCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCHH
ERGVDPEMQHKVMDRATRLVLDICGGEAGPVVEAKSDADLPKPAQILLRRSKLDKILGHH
HCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCC
VPDSDVVEILERLGFGVVAGEGSWQVTTATYRFDMAIEEDLIEEVARIYGYNNIPNVAPV
CCCHHHHHHHHHCCCEEEECCCCEEEEEEEEEEECHHHHHHHHHHHHHCCCCCCCCCCHH
ASLRMSDHKETDLSLKRVRSLLVARGFQEAVTYSFVDPKLQNLVHPGEQAMVLPNPISSE
HHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHCCCCCCEEEECCCCHHH
MSAMRLSMFTGLLTAVGYNQSRQQGRVRLFETGLRFVPDINAESGVRQQAMLGCIITGLQ
HHHHHHHHHHHHHHHHCCCCCHHCCCEEEEECCCHHCCCCCCCCCHHHHHHHHHHHHCCC
NDEHWAMESKTVDFFDLKGDLEAIIGLTVSASEFSFRVATHSALHPGQCAEILRNDRVIG
CCCCCEECCCCEEEEECCCCHHHHEEEEEECCCCEEEEEECCCCCCHHHHHHHHCCCEEE
HIGAIHPSLEKPFGLNGKTIVFELELDALLHTSLPLAQAVSKFPANRRDIAVVVDESVSA
ECCCCCCCCCCCCCCCCCEEEEEEEHHHHHHCCCCHHHHHHHCCCCCCCEEEEEECCCCH
GDVMKLIRKVGENQLVGINLFDVYLGKGVEPGKKSLAIALTLQDTTRTLEEKEIAETVES
HHHHHHHHHCCCCCEEEEEEEEHHHCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHH
VVSALKTEFNASLRD
HHHHHHHHCCCCCCC
>Mature Secondary Structure
MKFSESWLREWVNPAVSREALSHQITMAGLEVDGVDAVAAEFSGVVIGEVVECGQHPDAD
CCCCHHHHHHHHCHHHHHHHHHHEEEEEECEECCCHHHHHHHCCCHHHHHHHCCCCCCCC
KLRVTKVSVGSGELIDIVCGAPNCRQGLRVAVAMVGAVLPGDFKIKKAKLRGMPSEGMLC
CEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEHHHHCCCCCCCCEE
SYSELGIDIDSDGIIELPLDAPLGTDLREYLQLDDAVIEVDLTANRADCLGMVGLAREVG
EHHHHCEEECCCCEEEECCCCCCCCCHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHH
VLNRAAVTEPQWQAVTPTIDAKVAINVKESAACPRYLGRVVKNVNVKAATPLWMQEKLRR
HHHHHHCCCCCCEEECCCCCCEEEEEEHHHCCCHHHHHHHHHCCCCEECCCHHHHHHHHH
SGIRSIDPIVDITNFVLVEFGQPMHAFDLAKLTGDIQVRLGNGEEKITLLDGSEVTIPSD
CCCCCCCHHHHHHHHHEEECCCCHHHHHHHHCCCEEEEEECCCCCEEEEECCCEEECCCC
TLVIADNVCPLALAGVFGGEYSGVSDTTQDILLECAFFAPLAIMGKSRRLGLHTDSSHRF
CEEEECCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCHH
ERGVDPEMQHKVMDRATRLVLDICGGEAGPVVEAKSDADLPKPAQILLRRSKLDKILGHH
HCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCC
VPDSDVVEILERLGFGVVAGEGSWQVTTATYRFDMAIEEDLIEEVARIYGYNNIPNVAPV
CCCHHHHHHHHHCCCEEEECCCCEEEEEEEEEEECHHHHHHHHHHHHHCCCCCCCCCCHH
ASLRMSDHKETDLSLKRVRSLLVARGFQEAVTYSFVDPKLQNLVHPGEQAMVLPNPISSE
HHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHCCCCCCEEEECCCCHHH
MSAMRLSMFTGLLTAVGYNQSRQQGRVRLFETGLRFVPDINAESGVRQQAMLGCIITGLQ
HHHHHHHHHHHHHHHHCCCCCHHCCCEEEEECCCHHCCCCCCCCCHHHHHHHHHHHHCCC
NDEHWAMESKTVDFFDLKGDLEAIIGLTVSASEFSFRVATHSALHPGQCAEILRNDRVIG
CCCCCEECCCCEEEEECCCCHHHHEEEEEECCCCEEEEEECCCCCCHHHHHHHHCCCEEE
HIGAIHPSLEKPFGLNGKTIVFELELDALLHTSLPLAQAVSKFPANRRDIAVVVDESVSA
ECCCCCCCCCCCCCCCCCEEEEEEEHHHHHHCCCCHHHHHHHCCCCCCCEEEEEECCCCH
GDVMKLIRKVGENQLVGINLFDVYLGKGVEPGKKSLAIALTLQDTTRTLEEKEIAETVES
HHHHHHHHHCCCCCEEEEEEEEHHHCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHH
VVSALKTEFNASLRD
HHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]