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The map label for this gene is pheS [H]

Identifier: 117920308

GI number: 117920308

Start: 2207235

End: 2208254

Strand: Direct

Name: pheS [H]

Synonym: Shewana3_1863

Alternate gene names: 117920308

Gene position: 2207235-2208254 (Clockwise)

Preceding gene: 117920305

Following gene: 117920309

Centisome position: 44.39

GC content: 47.16

Gene sequence:

>1020_bases
TTGTTTATCAAGCGCGACTATGCAGTGGAAGAGAAAATGCAGCAGTTAACTGAGATCGTAGAACAAGCCTTAGTCATTAT
TGACCAGGCCAGTGATCTAAAAGCACTGGATGATATCCGTGTCGATTACCTGGGTAAGAAGGGTAAGATCACCGACATGA
TGAAAATGATGGGCAGCTTAAGTCCTGAAGAAAAACCCGCTTTTGGTCAGGCGGTCAATGATGCGAAGCAGGCCATTCAA
CAGAAATTAACTGAGCGCATCGACGGCCTGAAAAGTGCCGAACTGGAAGCCAAGTTAATCGCCGAAAAGATTGATGTGAC
GCTACCTGGCCGCACTATCGACATCGGTGGTTTACACCCAGTGACGCGCACCATTGAACGTATCGAAACCTTTTTTGGGG
AATTAGGGTTTACGGTAAAACAAGGGCCTGAAATCGAAGATGACTTCCATAACTTCGACGCCTTGAATATCTCTGAGCAC
CACCCAGCGCGTGCCGACCACGATACGTTTTACTTTAATCCTAAGCTGATGCTGCGTACCCAAACTTCGGGCGTGCAGAT
CCGTACTATGGAAACTGAAAAGCCGCCATTGCGGATTATTTCACCGGGTCGTGTGTATCGTAACGACTACGACCAAACTC
ACACGCCAATGTTCCACCAAGTGGAAGGTTTGCTGGTGGATGAAAACGTTAACTTCGCCGAATTAAAAGGCGTGTTGCAT
GACTTCCTACGTAACTTCTTCGAGGAAGATTTACAGGTGCGTTTCCGTCCTTCTTATTTCCCATTCACTGAGCCTTCAGC
CGAAGTAGACGTAATGGGTAAAAACGGCAAATGGTTAGAAGTGTTAGGCTGCGGTATGGTGCACCCGAACGTGCTACGCA
GCGTGGGCATCGATCCAGAAAAATACTCTGGTTTTGCTTTTGGTATGGGCGTTGAGCGTTTAACTATGCTGCGTTACGGC
GTAAACGATCTACGTGCGTTTTTCGAAAACGACCTGCGTTTCCTGAAGCAATTTAAATAA

Upstream 100 bases:

>100_bases
ATTTCTCTCCTTTTATTTCGTTATAGCTAGCAAAGCGTCTGGCATTAACGCCCGATAACCTGAGCACCCAAATAGCCTGA
AAGTTTGGCGCCCATAGCAC

Downstream 100 bases:

>100_bases
CGGAGCTGTATAGCATGAAATTTAGCGAATCTTGGCTTCGTGAGTGGGTCAATCCTGCCGTTAGCCGTGAAGCATTATCC
CACCAGATCACTATGGCTGG

Product: phenylalanyl-tRNA synthetase subunit alpha

Products: NA

Alternate protein names: Phenylalanine--tRNA ligase alpha chain; PheRS [H]

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MFIKRDYAVEEKMQQLTEIVEQALVIIDQASDLKALDDIRVDYLGKKGKITDMMKMMGSLSPEEKPAFGQAVNDAKQAIQ
QKLTERIDGLKSAELEAKLIAEKIDVTLPGRTIDIGGLHPVTRTIERIETFFGELGFTVKQGPEIEDDFHNFDALNISEH
HPARADHDTFYFNPKLMLRTQTSGVQIRTMETEKPPLRIISPGRVYRNDYDQTHTPMFHQVEGLLVDENVNFAELKGVLH
DFLRNFFEEDLQVRFRPSYFPFTEPSAEVDVMGKNGKWLEVLGCGMVHPNVLRSVGIDPEKYSGFAFGMGVERLTMLRYG
VNDLRAFFENDLRFLKQFK

Sequences:

>Translated_339_residues
MFIKRDYAVEEKMQQLTEIVEQALVIIDQASDLKALDDIRVDYLGKKGKITDMMKMMGSLSPEEKPAFGQAVNDAKQAIQ
QKLTERIDGLKSAELEAKLIAEKIDVTLPGRTIDIGGLHPVTRTIERIETFFGELGFTVKQGPEIEDDFHNFDALNISEH
HPARADHDTFYFNPKLMLRTQTSGVQIRTMETEKPPLRIISPGRVYRNDYDQTHTPMFHQVEGLLVDENVNFAELKGVLH
DFLRNFFEEDLQVRFRPSYFPFTEPSAEVDVMGKNGKWLEVLGCGMVHPNVLRSVGIDPEKYSGFAFGMGVERLTMLRYG
VNDLRAFFENDLRFLKQFK
>Mature_339_residues
MFIKRDYAVEEKMQQLTEIVEQALVIIDQASDLKALDDIRVDYLGKKGKITDMMKMMGSLSPEEKPAFGQAVNDAKQAIQ
QKLTERIDGLKSAELEAKLIAEKIDVTLPGRTIDIGGLHPVTRTIERIETFFGELGFTVKQGPEIEDDFHNFDALNISEH
HPARADHDTFYFNPKLMLRTQTSGVQIRTMETEKPPLRIISPGRVYRNDYDQTHTPMFHQVEGLLVDENVNFAELKGVLH
DFLRNFFEEDLQVRFRPSYFPFTEPSAEVDVMGKNGKWLEVLGCGMVHPNVLRSVGIDPEKYSGFAFGMGVERLTMLRYG
VNDLRAFFENDLRFLKQFK

Specific function: Unknown

COG id: COG0016

COG function: function code J; Phenylalanyl-tRNA synthetase alpha subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha chain type 1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI4758340, Length=259, Percent_Identity=34.3629343629344, Blast_Score=133, Evalue=3e-31,
Organism=Homo sapiens, GI5729820, Length=278, Percent_Identity=32.0143884892086, Blast_Score=126, Evalue=3e-29,
Organism=Escherichia coli, GI1788007, Length=327, Percent_Identity=74.6177370030581, Blast_Score=526, Evalue=1e-151,
Organism=Caenorhabditis elegans, GI32566635, Length=245, Percent_Identity=35.9183673469388, Blast_Score=132, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI32563657, Length=259, Percent_Identity=30.5019305019305, Blast_Score=124, Evalue=7e-29,
Organism=Caenorhabditis elegans, GI17508957, Length=259, Percent_Identity=30.5019305019305, Blast_Score=124, Evalue=8e-29,
Organism=Saccharomyces cerevisiae, GI6321087, Length=366, Percent_Identity=29.2349726775956, Blast_Score=133, Evalue=5e-32,
Organism=Saccharomyces cerevisiae, GI6325304, Length=316, Percent_Identity=26.5822784810127, Blast_Score=105, Evalue=1e-23,
Organism=Drosophila melanogaster, GI18858079, Length=258, Percent_Identity=31.3953488372093, Blast_Score=123, Evalue=2e-28,
Organism=Drosophila melanogaster, GI17137424, Length=280, Percent_Identity=28.9285714285714, Blast_Score=110, Evalue=2e-24,

Paralogues:

None

Copy number: 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006195
- InterPro:   IPR004529
- InterPro:   IPR004188
- InterPro:   IPR022911
- InterPro:   IPR002319
- InterPro:   IPR010978 [H]

Pfam domain/function: PF02912 Phe_tRNA-synt_N; PF01409 tRNA-synt_2d [H]

EC number: =6.1.1.20 [H]

Molecular weight: Translated: 38826; Mature: 38826

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: PS50862 AA_TRNA_LIGASE_II

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIKRDYAVEEKMQQLTEIVEQALVIIDQASDLKALDDIRVDYLGKKGKITDMMKMMGSL
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCC
SPEEKPAFGQAVNDAKQAIQQKLTERIDGLKSAELEAKLIAEKIDVTLPGRTIDIGGLHP
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCEEECCCEEECCCCCH
VTRTIERIETFFGELGFTVKQGPEIEDDFHNFDALNISEHHPARADHDTFYFNPKLMLRT
HHHHHHHHHHHHHHHCCEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEEECCEEEEEE
QTSGVQIRTMETEKPPLRIISPGRVYRNDYDQTHTPMFHQVEGLLVDENVNFAELKGVLH
ECCCEEEEEECCCCCCEEEECCCHHHCCCCCCCCCCHHHHHCCEEEECCCCHHHHHHHHH
DFLRNFFEEDLQVRFRPSYFPFTEPSAEVDVMGKNGKWLEVLGCGMVHPNVLRSVGIDPE
HHHHHHHHHHHEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCHHHHHHCCCCHH
KYSGFAFGMGVERLTMLRYGVNDLRAFFENDLRFLKQFK
HCCCEEECCCHHHHHHHHHCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFIKRDYAVEEKMQQLTEIVEQALVIIDQASDLKALDDIRVDYLGKKGKITDMMKMMGSL
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCC
SPEEKPAFGQAVNDAKQAIQQKLTERIDGLKSAELEAKLIAEKIDVTLPGRTIDIGGLHP
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCEEECCCEEECCCCCH
VTRTIERIETFFGELGFTVKQGPEIEDDFHNFDALNISEHHPARADHDTFYFNPKLMLRT
HHHHHHHHHHHHHHHCCEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEEECCEEEEEE
QTSGVQIRTMETEKPPLRIISPGRVYRNDYDQTHTPMFHQVEGLLVDENVNFAELKGVLH
ECCCEEEEEECCCCCCEEEECCCHHHCCCCCCCCCCHHHHHCCEEEECCCCHHHHHHHHH
DFLRNFFEEDLQVRFRPSYFPFTEPSAEVDVMGKNGKWLEVLGCGMVHPNVLRSVGIDPE
HHHHHHHHHHHEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCHHHHHHCCCCHH
KYSGFAFGMGVERLTMLRYGVNDLRAFFENDLRFLKQFK
HCCCEEECCCHHHHHHHHHCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA