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The map label for this gene is ydbL [H]

Identifier: 117920288

GI number: 117920288

Start: 2183421

End: 2183771

Strand: Reverse

Name: ydbL [H]

Synonym: Shewana3_1843

Alternate gene names: 117920288

Gene position: 2183771-2183421 (Counterclockwise)

Preceding gene: 117920289

Following gene: 117920283

Centisome position: 43.92

GC content: 46.15

Gene sequence:

>351_bases
ATGAAATCAATGCCACTCAAAACCCTGCTACAAAAGCCAACATTACTGCTGTTGCTCGGCCTGAGTTTATTCAGCTTAAA
TGCCTTTGCCATGTCATTGCAGGAAGCTAAATCCCAAGGTTACTTAGGTGAGCAGCTCAATGGCTATTTGGGTCTAGTGC
AAAATAATAGCGAGGCCAAGGCCGTGATGGACGATGTGAACAACAAACGCCGCGCCCATTACGAAACCATCGCTAAAAAG
AACAATATCTCCGCCGCCGATGTAGCCAAACTTGCCGGTGAAAAAGCCATCGCCGCCACAGATAAAGGCAACTATGTGCA
AAACGCCCAAGGAAAATGGGTTAAAAAATAG

Upstream 100 bases:

>100_bases
GAAAATTGAACACGAGATAAAAATCAAAGTGGATAAGGAGCTAGATCAGCTTCTATCAGATGATAAGTTGTTCTAATCAC
AAAGAATTGAGGAATATACA

Downstream 100 bases:

>100_bases
TGAGTTAGCACTTCCAAGCGACTAAGCAATGACAAAAACGCCTGCAATTGCAGGCGTTTTTGTATCAAACATCTCTTGCA
GATTGACCCTCTCAATACGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MKSMPLKTLLQKPTLLLLLGLSLFSLNAFAMSLQEAKSQGYLGEQLNGYLGLVQNNSEAKAVMDDVNNKRRAHYETIAKK
NNISAADVAKLAGEKAIAATDKGNYVQNAQGKWVKK

Sequences:

>Translated_116_residues
MKSMPLKTLLQKPTLLLLLGLSLFSLNAFAMSLQEAKSQGYLGEQLNGYLGLVQNNSEAKAVMDDVNNKRRAHYETIAKK
NNISAADVAKLAGEKAIAATDKGNYVQNAQGKWVKK
>Mature_116_residues
MKSMPLKTLLQKPTLLLLLGLSLFSLNAFAMSLQEAKSQGYLGEQLNGYLGLVQNNSEAKAVMDDVNNKRRAHYETIAKK
NNISAADVAKLAGEKAIAATDKGNYVQNAQGKWVKK

Specific function: Unknown

COG id: COG3784

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081895, Length=107, Percent_Identity=42.0560747663551, Blast_Score=96, Evalue=6e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008309 [H]

Pfam domain/function: PF07027 DUF1318 [H]

EC number: NA

Molecular weight: Translated: 12653; Mature: 12653

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSMPLKTLLQKPTLLLLLGLSLFSLNAFAMSLQEAKSQGYLGEQLNGYLGLVQNNSEAK
CCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCEEEEEECCCHHH
AVMDDVNNKRRAHYETIAKKNNISAADVAKLAGEKAIAATDKGNYVQNAQGKWVKK
HHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEECCCCCEEECCCCCCCCC
>Mature Secondary Structure
MKSMPLKTLLQKPTLLLLLGLSLFSLNAFAMSLQEAKSQGYLGEQLNGYLGLVQNNSEAK
CCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCEEEEEECCCHHH
AVMDDVNNKRRAHYETIAKKNNISAADVAKLAGEKAIAATDKGNYVQNAQGKWVKK
HHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEECCCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]