| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is yfjI [H]
Identifier: 117920241
GI number: 117920241
Start: 2122846
End: 2124315
Strand: Direct
Name: yfjI [H]
Synonym: Shewana3_1794
Alternate gene names: 117920241
Gene position: 2122846-2124315 (Clockwise)
Preceding gene: 117920240
Following gene: 117920242
Centisome position: 42.69
GC content: 37.41
Gene sequence:
>1470_bases ATGAATTATTCTCGATATCATTATTATTTTCCTATCTCGGATGGCAATTTTCCAAATTTAAGTGCTGCTCCGTTAATTCG CGATGCTTTTTTTGAAACTTTTGAATCTGTTCAGGCTCCATATAGCATGATCATGCTTGTTCAGCTAAGCACAATATCAA CTGCTTTACAGGGAGCATTTAATGTATCGCTCCCAATCAATAAAATATGCCCTGTGTCAATATTGGCAATTACGATTGCC GAGTCTGGTGAGCGAAAATCAACTGTTGAAAGCCAATATATGGAAGGGCTTAAGGCCGCACAAAAAGAATTTCTGATAGA ATACAGAAGCATACTTAATAAATATAAAGTAGAAAAGGAAATTCATGATGACGAAACGGTAAGGCTAAGAAGACGCCTTT CAAAAGAAAAAGATAATGAAAGATATGAATTAGCACTTAATGAATTGCAAGCACATCGTGATGCTGAACCGATAAAACCA AGAGCACCCAAATTTCTTTATGAGGATATAACCAAAGAAGCATTGCTTTTGGGATTAAATGAAAACTTACCAAATGCATT TCTAGATTCCGATGAAGGTGGGGTTTTATTTAAAAGTTCTATTATGCGAAATTCCCCGGTTATTAATTCATTATGGAGTG GAGGGGAACTCGATATAGATAGAAAAACATTAGAGTCTTTTGTGGTGTCTGATGCAAGACTGACGATGCATATCATGACT CAATGGAGTGCATTGCAAGATTTTATTGCACGGTCGAAGGATGACATGAGGGGGAATGGTTTTTTTGCTCGAGCAATAGT GGCTAATCCTTTTTCTTTATGTGGCTACAGGCAAGTTACTGGATATGAACATTCTAAGACGGCGATTGAGAAATTTAACG ATAGAATAAAGCAGTCACTATTAAATGTCATTGCTATGGAAGATTATAGGAACAGGATCACTGTCACATTCTCAAATGAA GCTAAAAATGTGTGGTTAGATATTGCTAATGACATCGAAATTAAAATGGGCCCTGGTGGCATGTATGAATGTGCAAAAGA CCATGCATCCAAGGTGCCAGAGAACATTGCTAGGGTTGCAGCCTTGATCCATTGTTTCGAACATCCGGGTGATTTTGAAA TATCTGCAGAATCCTTGTGGTTAGCCGTTGAGTTGTTAAGTTATTTCTCAAATGATTTTATGCGAGTCTTTTGTCCTCCA CCTAAATATGTGTTGGATGCATGTGCGCTGAGCGAATGGCTGAAGCCATTTACCGCTTCGGGAATAAGATACATAAGAAA GAATTATATTTTACAATTTGGTCCAAACTGTATTCGTAAAAAAGCCGATTTACAAGCCGCATTAGATTATCTAAAGCAAA GCAACCCAATGGCAGAAATTTTGATAGATAAGACTAGGGTAATAGATTTATTTTTCGTTCTAAAGCCTGACAATGCTCAA CTAGCTGAAAATCTGGCGCGCTACTCATGA
Upstream 100 bases:
>100_bases CGTGCTGTAGGCTGGTACATGCAAGAAGTCGAACAGTGGCTGCAAGGTAGAAGATTTTGCAGACCTTAAAAGTGATTAAC TTATTAAATAAGGGTGGATT
Downstream 100 bases:
>100_bases GCAGTACTGTTTAAATCATAAGAAATCGCTTTAATTTTTATTATACTATGCATATTAATTCAGAGTGGCGATAACTGTTA GTTACAATTATTTTCCTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 489; Mature: 489
Protein sequence:
>489_residues MNYSRYHYYFPISDGNFPNLSAAPLIRDAFFETFESVQAPYSMIMLVQLSTISTALQGAFNVSLPINKICPVSILAITIA ESGERKSTVESQYMEGLKAAQKEFLIEYRSILNKYKVEKEIHDDETVRLRRRLSKEKDNERYELALNELQAHRDAEPIKP RAPKFLYEDITKEALLLGLNENLPNAFLDSDEGGVLFKSSIMRNSPVINSLWSGGELDIDRKTLESFVVSDARLTMHIMT QWSALQDFIARSKDDMRGNGFFARAIVANPFSLCGYRQVTGYEHSKTAIEKFNDRIKQSLLNVIAMEDYRNRITVTFSNE AKNVWLDIANDIEIKMGPGGMYECAKDHASKVPENIARVAALIHCFEHPGDFEISAESLWLAVELLSYFSNDFMRVFCPP PKYVLDACALSEWLKPFTASGIRYIRKNYILQFGPNCIRKKADLQAALDYLKQSNPMAEILIDKTRVIDLFFVLKPDNAQ LAENLARYS
Sequences:
>Translated_489_residues MNYSRYHYYFPISDGNFPNLSAAPLIRDAFFETFESVQAPYSMIMLVQLSTISTALQGAFNVSLPINKICPVSILAITIA ESGERKSTVESQYMEGLKAAQKEFLIEYRSILNKYKVEKEIHDDETVRLRRRLSKEKDNERYELALNELQAHRDAEPIKP RAPKFLYEDITKEALLLGLNENLPNAFLDSDEGGVLFKSSIMRNSPVINSLWSGGELDIDRKTLESFVVSDARLTMHIMT QWSALQDFIARSKDDMRGNGFFARAIVANPFSLCGYRQVTGYEHSKTAIEKFNDRIKQSLLNVIAMEDYRNRITVTFSNE AKNVWLDIANDIEIKMGPGGMYECAKDHASKVPENIARVAALIHCFEHPGDFEISAESLWLAVELLSYFSNDFMRVFCPP PKYVLDACALSEWLKPFTASGIRYIRKNYILQFGPNCIRKKADLQAALDYLKQSNPMAEILIDKTRVIDLFFVLKPDNAQ LAENLARYS >Mature_489_residues MNYSRYHYYFPISDGNFPNLSAAPLIRDAFFETFESVQAPYSMIMLVQLSTISTALQGAFNVSLPINKICPVSILAITIA ESGERKSTVESQYMEGLKAAQKEFLIEYRSILNKYKVEKEIHDDETVRLRRRLSKEKDNERYELALNELQAHRDAEPIKP RAPKFLYEDITKEALLLGLNENLPNAFLDSDEGGVLFKSSIMRNSPVINSLWSGGELDIDRKTLESFVVSDARLTMHIMT QWSALQDFIARSKDDMRGNGFFARAIVANPFSLCGYRQVTGYEHSKTAIEKFNDRIKQSLLNVIAMEDYRNRITVTFSNE AKNVWLDIANDIEIKMGPGGMYECAKDHASKVPENIARVAALIHCFEHPGDFEISAESLWLAVELLSYFSNDFMRVFCPP PKYVLDACALSEWLKPFTASGIRYIRKNYILQFGPNCIRKKADLQAALDYLKQSNPMAEILIDKTRVIDLFFVLKPDNAQ LAENLARYS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788978, Length=459, Percent_Identity=31.1546840958606, Blast_Score=219, Evalue=5e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55770; Mature: 55770
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYSRYHYYFPISDGNFPNLSAAPLIRDAFFETFESVQAPYSMIMLVQLSTISTALQGAF CCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCE NVSLPINKICPVSILAITIAESGERKSTVESQYMEGLKAAQKEFLIEYRSILNKYKVEKE EECCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IHDDETVRLRRRLSKEKDNERYELALNELQAHRDAEPIKPRAPKFLYEDITKEALLLGLN CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHEEECC ENLPNAFLDSDEGGVLFKSSIMRNSPVINSLWSGGELDIDRKTLESFVVSDARLTMHIMT CCCCCHHCCCCCCCEEEEHHHHCCCCCHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHH QWSALQDFIARSKDDMRGNGFFARAIVANPFSLCGYRQVTGYEHSKTAIEKFNDRIKQSL HHHHHHHHHHCCCCCCCCCCEEEEHHHCCCHHHCCCHHHCCCCHHHHHHHHHHHHHHHHH LNVIAMEDYRNRITVTFSNEAKNVWLDIANDIEIKMGPGGMYECAKDHASKVPENIARVA HHHHHHHHCCCEEEEEECCCCCEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHH ALIHCFEHPGDFEISAESLWLAVELLSYFSNDFMRVFCPPPKYVLDACALSEWLKPFTAS HHHHHHCCCCCCEECHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHH GIRYIRKNYILQFGPNCIRKKADLQAALDYLKQSNPMAEILIDKTRVIDLFFVLKPDNAQ HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEEEEEEEECCCCHH LAENLARYS HHHHHHCCC >Mature Secondary Structure MNYSRYHYYFPISDGNFPNLSAAPLIRDAFFETFESVQAPYSMIMLVQLSTISTALQGAF CCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCE NVSLPINKICPVSILAITIAESGERKSTVESQYMEGLKAAQKEFLIEYRSILNKYKVEKE EECCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IHDDETVRLRRRLSKEKDNERYELALNELQAHRDAEPIKPRAPKFLYEDITKEALLLGLN CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHEEECC ENLPNAFLDSDEGGVLFKSSIMRNSPVINSLWSGGELDIDRKTLESFVVSDARLTMHIMT CCCCCHHCCCCCCCEEEEHHHHCCCCCHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHH QWSALQDFIARSKDDMRGNGFFARAIVANPFSLCGYRQVTGYEHSKTAIEKFNDRIKQSL HHHHHHHHHHCCCCCCCCCCEEEEHHHCCCHHHCCCHHHCCCCHHHHHHHHHHHHHHHHH LNVIAMEDYRNRITVTFSNEAKNVWLDIANDIEIKMGPGGMYECAKDHASKVPENIARVA HHHHHHHHCCCEEEEEECCCCCEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHH ALIHCFEHPGDFEISAESLWLAVELLSYFSNDFMRVFCPPPKYVLDACALSEWLKPFTAS HHHHHHCCCCCCEECHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHH GIRYIRKNYILQFGPNCIRKKADLQAALDYLKQSNPMAEILIDKTRVIDLFFVLKPDNAQ HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEEEEEEEECCCCHH LAENLARYS HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]