Click here to switch to the map view.

The map label for this gene is 117920240

Identifier: 117920240

GI number: 117920240

Start: 2121390

End: 2122307

Strand: Direct

Name: 117920240

Synonym: Shewana3_1793

Alternate gene names: NA

Gene position: 2121390-2122307 (Clockwise)

Preceding gene: 117920239

Following gene: 117920241

Centisome position: 42.66

GC content: 35.29

Gene sequence:

>918_bases
ATGGATGTGTCAATGCAAAAAATTGTAGAGTTATCGAAGGTGAACTTAAATGCTAGCCGAGAAGAAGTTATACAGTACCT
TTTGAAAGAAAATAAACCTGTCTTAATTTTTTCTCCTGCTAATATTAATGTTTGGGCCGTATATGAAAGGAGTTCGTATA
AAAATCGTAATGGGCCATATCTAGATAGAGTGGATTCTATGTCTAGAAAGGTTGCACGGGAACGATTGAAACGTAGTGAA
TCATTCTCAGTGGCATCATTGGTTCCGAAAACAGAATATCTAAGGTTGGGGAGTGATGACTTAACCGTATTAATAAAAAA
CGGGATTGTTAATTTGAAATTCATCACAGAATTCTACCGGTATGCTGAAAACTTCGAACTTGAATTGATGAGTGGTGAAC
AGTATATAGAAAAATATGAAACACCAATTAATGCAAAAAATTTGCGGATAAATTCTCAGTCTGATTTCCATGACTATACC
TACACTATTAAGTTTTTCTTTACAAGAAAAAGCTTTAAATTTTTATCCAATACACATTTTATTGTAAATCAGCTAGAAGA
CTTACCAACTAAAATAGATTCAGTTTATGTTTTTGAACGTGATATTCTTTCATTTGTTAATCAAGATTTCGAACGAGAGA
TAGATACCACTGACATTCCCGAAACAAGTCCTTACTATGTTAAAGATTTCTTACGTAATCAATCTGATCTGGACCAATTA
TCTCTCTTAGGCTGCCGTTATTACTGGGGTAAAACGGCTAATCCGCCCAAAGTTAAAGGATTGGTAGAGCGGATTATGAA
TCAACTCGGTTATGCTCAAAAAAAGGCAGAAGCGGCGGCATTTTTCTCAACCCTAATCCCGAAGGCCTATGCGGTAAAGA
TAAAACCATTGCAGATGGTTGCCAGTTTCCATACTTAA

Upstream 100 bases:

>100_bases
AAAATATTCACAAGTTAAGCCATCTAGTGAGGGAAAAGTTTAAAAAACAAATTCATTTTATCTGCTATTTCTGCTACTAA
TAGCAGAAATAGCAGATAAA

Downstream 100 bases:

>100_bases
CTTACTGCCTTGAACGTTTTTGGCATAATCAGGAAGAATACAATAAAAATATAACATCTAAAATAAAAGATTTTTTAGTT
AAAGAAGGTTTTAGCAGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MDVSMQKIVELSKVNLNASREEVIQYLLKENKPVLIFSPANINVWAVYERSSYKNRNGPYLDRVDSMSRKVARERLKRSE
SFSVASLVPKTEYLRLGSDDLTVLIKNGIVNLKFITEFYRYAENFELELMSGEQYIEKYETPINAKNLRINSQSDFHDYT
YTIKFFFTRKSFKFLSNTHFIVNQLEDLPTKIDSVYVFERDILSFVNQDFEREIDTTDIPETSPYYVKDFLRNQSDLDQL
SLLGCRYYWGKTANPPKVKGLVERIMNQLGYAQKKAEAAAFFSTLIPKAYAVKIKPLQMVASFHT

Sequences:

>Translated_305_residues
MDVSMQKIVELSKVNLNASREEVIQYLLKENKPVLIFSPANINVWAVYERSSYKNRNGPYLDRVDSMSRKVARERLKRSE
SFSVASLVPKTEYLRLGSDDLTVLIKNGIVNLKFITEFYRYAENFELELMSGEQYIEKYETPINAKNLRINSQSDFHDYT
YTIKFFFTRKSFKFLSNTHFIVNQLEDLPTKIDSVYVFERDILSFVNQDFEREIDTTDIPETSPYYVKDFLRNQSDLDQL
SLLGCRYYWGKTANPPKVKGLVERIMNQLGYAQKKAEAAAFFSTLIPKAYAVKIKPLQMVASFHT
>Mature_305_residues
MDVSMQKIVELSKVNLNASREEVIQYLLKENKPVLIFSPANINVWAVYERSSYKNRNGPYLDRVDSMSRKVARERLKRSE
SFSVASLVPKTEYLRLGSDDLTVLIKNGIVNLKFITEFYRYAENFELELMSGEQYIEKYETPINAKNLRINSQSDFHDYT
YTIKFFFTRKSFKFLSNTHFIVNQLEDLPTKIDSVYVFERDILSFVNQDFEREIDTTDIPETSPYYVKDFLRNQSDLDQL
SLLGCRYYWGKTANPPKVKGLVERIMNQLGYAQKKAEAAAFFSTLIPKAYAVKIKPLQMVASFHT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35610; Mature: 35610

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVSMQKIVELSKVNLNASREEVIQYLLKENKPVLIFSPANINVWAVYERSSYKNRNGPY
CCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEECCCEEEEEEEECCCCCCCCCCC
LDRVDSMSRKVARERLKRSESFSVASLVPKTEYLRLGSDDLTVLIKNGIVNLKFITEFYR
HHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHEEECCCCEEEEEECCCEEHHHHHHHHH
YAENFELELMSGEQYIEKYETPINAKNLRINSQSDFHDYTYTIKFFFTRKSFKFLSNTHF
HHCCCEEEEECCHHHHHHHCCCCCCCEEEECCCCCCCCEEEEEEEEEECHHHHHHCCCHH
IVNQLEDLPTKIDSVYVFERDILSFVNQDFEREIDTTDIPETSPYYVKDFLRNQSDLDQL
HHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCHHHH
SLLGCRYYWGKTANPPKVKGLVERIMNQLGYAQKKAEAAAFFSTLIPKAYAVKIKPLQMV
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCEEEEEHHHHHH
ASFHT
HHCCC
>Mature Secondary Structure
MDVSMQKIVELSKVNLNASREEVIQYLLKENKPVLIFSPANINVWAVYERSSYKNRNGPY
CCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEECCCEEEEEEEECCCCCCCCCCC
LDRVDSMSRKVARERLKRSESFSVASLVPKTEYLRLGSDDLTVLIKNGIVNLKFITEFYR
HHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHEEECCCCEEEEEECCCEEHHHHHHHHH
YAENFELELMSGEQYIEKYETPINAKNLRINSQSDFHDYTYTIKFFFTRKSFKFLSNTHF
HHCCCEEEEECCHHHHHHHCCCCCCCEEEECCCCCCCCEEEEEEEEEECHHHHHHCCCHH
IVNQLEDLPTKIDSVYVFERDILSFVNQDFEREIDTTDIPETSPYYVKDFLRNQSDLDQL
HHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCHHHH
SLLGCRYYWGKTANPPKVKGLVERIMNQLGYAQKKAEAAAFFSTLIPKAYAVKIKPLQMV
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCEEEEEHHHHHH
ASFHT
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA