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The map label for this gene is spmA [H]

Identifier: 117920218

GI number: 117920218

Start: 2085231

End: 2086457

Strand: Direct

Name: spmA [H]

Synonym: Shewana3_1771

Alternate gene names: 117920218

Gene position: 2085231-2086457 (Clockwise)

Preceding gene: 117920216

Following gene: 117920222

Centisome position: 41.94

GC content: 52.4

Gene sequence:

>1227_bases
GTGCTAAATCGGGTGTGGTTAGTGTTTTTCCTCACATCACTGCTGGCGATGGCGGTACAGCTGTTTAATGGGCATATCGA
AGTGCTAGCCAACGCGGTAGAGGCCCTGTTTGCCAGCGCTAAACTCGCCGCTGAAATCGCCTTAGGCTTAGTGGGCGTTT
TATCCCTGTGGATGGGATTAATGCGAATTGGTGAAAAGGCAGGGGTTGTTGGGGCGATTGCCTTTGTGTTTGAGCCGCTG
CTGCGCCGCGTGATGCCTGAAGTGCCCAAGGGGCATCCCGCCTTTGGCAGTATGACGATGAACTTAACGGCCAACGTATT
TGGGCTGGATAATGCCGCAACGCCATTGGGATTAAAGGCAATGCAGGATTTGCAGAGTCTTAATCCGGTCAAAACCGTCG
CGACCAATGCGCAAATTCTATTTTTAGTGCTCAATACCTCCTCGGTGACCTTAGTTCCTGTCACTGTGTTTTTATACCGT
GCCCAACAGGGCGCAGCCGCACCAGCGGACATTTTTTTACCCATTATCCTTGCCACATCAGCCTCAACCTTAGCGGGGCT
TTTGATCGTCGCTGTTGTGCAGCGGCTTTCACTGCTCAATGCAGTGGTACTCGGATATGGCGCAGTACTGCTGTCAGCAT
TAGTCGCTAGTGGCTTTTATTTGATGACCTTAACGGCTGACGCGATTGGCACAGTATCGACCGCCTTAGGTAACGGGGTA
TTGCTACTGTTAGTCTTCAGTTTTGTGCTGGTGGCTGGCATGCGAAAAGTGGCGATTTATGATGAGTTTATCGAAGGCGC
CAAGGCGGGGTTTAACCAATCGATTCAACTTATTCCGTATCTGTTAGCCATGCTGCTGGCGATTGGCTTACTCAGGGCGT
CGGGCGCGTTGGATTACCTGCTGCAACTGATTGCCAGTGGGGTGAGTCTTTTCGGGTTTGATACTCGCTTTGTCGATGCG
ATGCCAACCGCATTAATGAAACCTTTTAGCGGTTCGGGCGCGCGGGCCATGATGCTCGAAACCATGGCGCATCATGGTGT
GGACTCCTTTGCAGGGCGCTTGGCGGCGATTTTCCAAGGGAGTACTGAAACGACTTTCTATGTGTTAGCCGTTTACTTTG
GCTCCGTTGGGATCCGTCACGGGCGCCATGCGCTCGCCTGTGGCTTAACGGCCGACTTTGCGGGGATCTGCGCCGCAATT
GCGGTCTGTTATTGGTTTTATGGCTAA

Upstream 100 bases:

>100_bases
TTTACTGGGCTGGGATTTTCTCCCTTGGCTTTTGCCATCCCAAACGAGTCATTAAAGCAACACAAAGACAAAGCATGAAT
AAGAATAAGGAAGGGGCAGA

Downstream 100 bases:

>100_bases
GGATGCAATTGAGAAGAGCTGATTGACAGCGATAGTAGACTGTTGCTTTAGCATATAAAAATCAGGCGCATTAGAGTTTA
TCTAATGCGCCTGATTGTTA

Product: nucleoside recognition domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MLNRVWLVFFLTSLLAMAVQLFNGHIEVLANAVEALFASAKLAAEIALGLVGVLSLWMGLMRIGEKAGVVGAIAFVFEPL
LRRVMPEVPKGHPAFGSMTMNLTANVFGLDNAATPLGLKAMQDLQSLNPVKTVATNAQILFLVLNTSSVTLVPVTVFLYR
AQQGAAAPADIFLPIILATSASTLAGLLIVAVVQRLSLLNAVVLGYGAVLLSALVASGFYLMTLTADAIGTVSTALGNGV
LLLLVFSFVLVAGMRKVAIYDEFIEGAKAGFNQSIQLIPYLLAMLLAIGLLRASGALDYLLQLIASGVSLFGFDTRFVDA
MPTALMKPFSGSGARAMMLETMAHHGVDSFAGRLAAIFQGSTETTFYVLAVYFGSVGIRHGRHALACGLTADFAGICAAI
AVCYWFYG

Sequences:

>Translated_408_residues
MLNRVWLVFFLTSLLAMAVQLFNGHIEVLANAVEALFASAKLAAEIALGLVGVLSLWMGLMRIGEKAGVVGAIAFVFEPL
LRRVMPEVPKGHPAFGSMTMNLTANVFGLDNAATPLGLKAMQDLQSLNPVKTVATNAQILFLVLNTSSVTLVPVTVFLYR
AQQGAAAPADIFLPIILATSASTLAGLLIVAVVQRLSLLNAVVLGYGAVLLSALVASGFYLMTLTADAIGTVSTALGNGV
LLLLVFSFVLVAGMRKVAIYDEFIEGAKAGFNQSIQLIPYLLAMLLAIGLLRASGALDYLLQLIASGVSLFGFDTRFVDA
MPTALMKPFSGSGARAMMLETMAHHGVDSFAGRLAAIFQGSTETTFYVLAVYFGSVGIRHGRHALACGLTADFAGICAAI
AVCYWFYG
>Mature_408_residues
MLNRVWLVFFLTSLLAMAVQLFNGHIEVLANAVEALFASAKLAAEIALGLVGVLSLWMGLMRIGEKAGVVGAIAFVFEPL
LRRVMPEVPKGHPAFGSMTMNLTANVFGLDNAATPLGLKAMQDLQSLNPVKTVATNAQILFLVLNTSSVTLVPVTVFLYR
AQQGAAAPADIFLPIILATSASTLAGLLIVAVVQRLSLLNAVVLGYGAVLLSALVASGFYLMTLTADAIGTVSTALGNGV
LLLLVFSFVLVAGMRKVAIYDEFIEGAKAGFNQSIQLIPYLLAMLLAIGLLRASGALDYLLQLIASGVSLFGFDTRFVDA
MPTALMKPFSGSGARAMMLETMAHHGVDSFAGRLAAIFQGSTETTFYVLAVYFGSVGIRHGRHALACGLTADFAGICAAI
AVCYWFYG

Specific function: Involved in spore core dehydration; might be involved in the transport of something into or out of the forespore or could be required for some modification of the cortex peptidoglycan structure [H]

COG id: COG2715

COG function: function code R; Uncharacterized membrane protein, required for spore maturation in B.subtilis.

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011642 [H]

Pfam domain/function: PF07670 Gate [H]

EC number: NA

Molecular weight: Translated: 42967; Mature: 42967

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNRVWLVFFLTSLLAMAVQLFNGHIEVLANAVEALFASAKLAAEIALGLVGVLSLWMGL
CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MRIGEKAGVVGAIAFVFEPLLRRVMPEVPKGHPAFGSMTMNLTANVFGLDNAATPLGLKA
HHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCHHHH
MQDLQSLNPVKTVATNAQILFLVLNTSSVTLVPVTVFLYRAQQGAAAPADIFLPIILATS
HHHHHHCCCHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHC
ASTLAGLLIVAVVQRLSLLNAVVLGYGAVLLSALVASGFYLMTLTADAIGTVSTALGNGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHHHHCCHH
LLLLVFSFVLVAGMRKVAIYDEFIEGAKAGFNQSIQLIPYLLAMLLAIGLLRASGALDYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHH
LQLIASGVSLFGFDTRFVDAMPTALMKPFSGSGARAMMLETMAHHGVDSFAGRLAAIFQG
HHHHHCCHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCC
STETTFYVLAVYFGSVGIRHGRHALACGLTADFAGICAAIAVCYWFYG
CCCHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLNRVWLVFFLTSLLAMAVQLFNGHIEVLANAVEALFASAKLAAEIALGLVGVLSLWMGL
CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MRIGEKAGVVGAIAFVFEPLLRRVMPEVPKGHPAFGSMTMNLTANVFGLDNAATPLGLKA
HHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCHHHH
MQDLQSLNPVKTVATNAQILFLVLNTSSVTLVPVTVFLYRAQQGAAAPADIFLPIILATS
HHHHHHCCCHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHC
ASTLAGLLIVAVVQRLSLLNAVVLGYGAVLLSALVASGFYLMTLTADAIGTVSTALGNGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHHHHCCHH
LLLLVFSFVLVAGMRKVAIYDEFIEGAKAGFNQSIQLIPYLLAMLLAIGLLRASGALDYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHH
LQLIASGVSLFGFDTRFVDAMPTALMKPFSGSGARAMMLETMAHHGVDSFAGRLAAIFQG
HHHHHCCHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCC
STETTFYVLAVYFGSVGIRHGRHALACGLTADFAGICAAIAVCYWFYG
CCCHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7934829; 1548223; 9384377; 7642500 [H]