| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is yceG [C]
Identifier: 117920212
GI number: 117920212
Start: 2079266
End: 2080276
Strand: Direct
Name: yceG [C]
Synonym: Shewana3_1765
Alternate gene names: 117920212
Gene position: 2079266-2080276 (Clockwise)
Preceding gene: 117920211
Following gene: 117920213
Centisome position: 41.82
GC content: 48.07
Gene sequence:
>1011_bases ATGAAAAAAATCATTCTGATCGCAAGTTCTACGTTGTTGACCTTGCTGACCTTAGCTTGTTTGGTTGGTTATTGGGGCTA TCGAACGATTATTGATTACAGCCAAACCCCCTTAGTCTTAACCGAAGCCAAAGAATTAACCATTGCCCGTGGCACCAGTG TGCACCAATTAGCGCAGCAGTTAGAAACCGATGGTGTTATCCAAGACAAATGGAAACTCAAATGGTTACTGAAATTGCGC CCGGAGCTGGCGAAGATCCGTACTGGTCTTTACGAGATGTCACCTTCGCAGTCGATTGCCGACTTACTCAACGATTTAGC GAATGGTAAGGTGAAAACCTTTAGCCTGACCTTAGTCGAAGGCAAAACCATTGCCGAGTGGGAACAACAACTCGCGAGTG CGCCGCACTTACAGTTGTCCCCCGAAGTCTTTAGTGCGGTATTGATGGAGCAGGGCGACGATTCGGCGTTGCCCGAAGGA AAATTCTTCCCCGATACTTACCATTACACTGCCGATAGCGATGCTAAGGCGCTGCTCACCCAAAGTTATAAGATGATGGA GCAGGAGCTGGCCAAAGCATGGGCGGAGCGTGTGCCCGGTTTACCACTTAAATCGCCCTACCAGATGTTGATCTTGGCAT CGATTGTTGAGAAAGAAACTGGCCAAGCGTTTGAGCGTGATCAAATCGCTGGCGTCTTTATCAATCGACTCAATCTGGGG ATGAAGCTGCAAACCGATCCAACGGTCATTTATGGTATGGGCGATAGATTTAAAGGCAATATCACCCGTAAAGATCTCGT CGAAGAGACCCCCTTTAACACCTATCGGATTTTCGGTTTACCGCCAACGCCGATTGCTGCGCCGAGTAAGGCGTCATTGC AGGCGGTGTCTAAACCTGCCAAGGTCAGTTATTTATATTTTGTGTCGCGCAACGATGGCACCCATGTGTTTTCGACCACC TTGGAAGAACACAATCGCGCCGTCGATATTTATCAGAGAAAGAAAAAATGA
Upstream 100 bases:
>100_bases ACAGCGTCTTAGGCGTAGTGGATGTGCTGGCGATTGACTCGCACACTTTTACTCCTTCTCCTTTGACAGCAGATCTTAGA CAAACACTTTCACTCTCACT
Downstream 100 bases:
>100_bases CCCAAGCATCCGCCAAATTCATTGTTGTTGAAGGACTGGAAGGCGCAGGCAAATCGAGTGCGATTGCCCTTATTCGCGAT TTTATTGAAAAACATACCGG
Product: aminodeoxychorismate lyase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MKKIILIASSTLLTLLTLACLVGYWGYRTIIDYSQTPLVLTEAKELTIARGTSVHQLAQQLETDGVIQDKWKLKWLLKLR PELAKIRTGLYEMSPSQSIADLLNDLANGKVKTFSLTLVEGKTIAEWEQQLASAPHLQLSPEVFSAVLMEQGDDSALPEG KFFPDTYHYTADSDAKALLTQSYKMMEQELAKAWAERVPGLPLKSPYQMLILASIVEKETGQAFERDQIAGVFINRLNLG MKLQTDPTVIYGMGDRFKGNITRKDLVEETPFNTYRIFGLPPTPIAAPSKASLQAVSKPAKVSYLYFVSRNDGTHVFSTT LEEHNRAVDIYQRKKK
Sequences:
>Translated_336_residues MKKIILIASSTLLTLLTLACLVGYWGYRTIIDYSQTPLVLTEAKELTIARGTSVHQLAQQLETDGVIQDKWKLKWLLKLR PELAKIRTGLYEMSPSQSIADLLNDLANGKVKTFSLTLVEGKTIAEWEQQLASAPHLQLSPEVFSAVLMEQGDDSALPEG KFFPDTYHYTADSDAKALLTQSYKMMEQELAKAWAERVPGLPLKSPYQMLILASIVEKETGQAFERDQIAGVFINRLNLG MKLQTDPTVIYGMGDRFKGNITRKDLVEETPFNTYRIFGLPPTPIAAPSKASLQAVSKPAKVSYLYFVSRNDGTHVFSTT LEEHNRAVDIYQRKKK >Mature_336_residues MKKIILIASSTLLTLLTLACLVGYWGYRTIIDYSQTPLVLTEAKELTIARGTSVHQLAQQLETDGVIQDKWKLKWLLKLR PELAKIRTGLYEMSPSQSIADLLNDLANGKVKTFSLTLVEGKTIAEWEQQLASAPHLQLSPEVFSAVLMEQGDDSALPEG KFFPDTYHYTADSDAKALLTQSYKMMEQELAKAWAERVPGLPLKSPYQMLILASIVEKETGQAFERDQIAGVFINRLNLG MKLQTDPTVIYGMGDRFKGNITRKDLVEETPFNTYRIFGLPPTPIAAPSKASLQAVSKPAKVSYLYFVSRNDGTHVFSTT LEEHNRAVDIYQRKKK
Specific function: Unknown
COG id: COG1559
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0755 family [H]
Homologues:
Organism=Escherichia coli, GI1787339, Length=317, Percent_Identity=41.6403785488959, Blast_Score=253, Evalue=2e-68,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003770 [H]
Pfam domain/function: PF02618 ADC_lyase [H]
EC number: NA
Molecular weight: Translated: 37676; Mature: 37676
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIILIASSTLLTLLTLACLVGYWGYRTIIDYSQTPLVLTEAKELTIARGTSVHQLAQQ CCEEEEEECHHHHHHHHHHHHHHHCCHHHEECCCCCCEEEECCCCEEEECCCCHHHHHHH LETDGVIQDKWKLKWLLKLRPELAKIRTGLYEMSPSQSIADLLNDLANGKVKTFSLTLVE HHCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEEEEEC GKTIAEWEQQLASAPHLQLSPEVFSAVLMEQGDDSALPEGKFFPDTYHYTADSDAKALLT CCHHHHHHHHHHCCCCCEECHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCHHHHHH QSYKMMEQELAKAWAERVPGLPLKSPYQMLILASIVEKETGQAFERDQIAGVFINRLNLG HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC MKLQTDPTVIYGMGDRFKGNITRKDLVEETPFNTYRIFGLPPTPIAAPSKASLQAVSKPA EEEECCCEEEEECCCCCCCCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHCCCC KVSYLYFVSRNDGTHVFSTTLEEHNRAVDIYQRKKK EEEEEEEEECCCCCEEEEHHHHHCCCEEHHHHHCCC >Mature Secondary Structure MKKIILIASSTLLTLLTLACLVGYWGYRTIIDYSQTPLVLTEAKELTIARGTSVHQLAQQ CCEEEEEECHHHHHHHHHHHHHHHCCHHHEECCCCCCEEEECCCCEEEECCCCHHHHHHH LETDGVIQDKWKLKWLLKLRPELAKIRTGLYEMSPSQSIADLLNDLANGKVKTFSLTLVE HHCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEEEEEC GKTIAEWEQQLASAPHLQLSPEVFSAVLMEQGDDSALPEGKFFPDTYHYTADSDAKALLT CCHHHHHHHHHHCCCCCEECHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCHHHHHH QSYKMMEQELAKAWAERVPGLPLKSPYQMLILASIVEKETGQAFERDQIAGVFINRLNLG HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC MKLQTDPTVIYGMGDRFKGNITRKDLVEETPFNTYRIFGLPPTPIAAPSKASLQAVSKPA EEEECCCEEEEECCCCCCCCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHCCCC KVSYLYFVSRNDGTHVFSTTLEEHNRAVDIYQRKKK EEEEEEEEECCCCCEEEEHHHHHCCCEEHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]