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The map label for this gene is 117920142

Identifier: 117920142

GI number: 117920142

Start: 1994139

End: 1994576

Strand: Direct

Name: 117920142

Synonym: Shewana3_1695

Alternate gene names: NA

Gene position: 1994139-1994576 (Clockwise)

Preceding gene: 117920141

Following gene: 117920145

Centisome position: 40.11

GC content: 53.2

Gene sequence:

>438_bases
ATGAATACCTTAGAAACCGCATCTATGACACTGATCCCCGCTGGAACACAACAGCCGATTAAAGGGCCGAGTGAATGGTT
TACCGGTGAGGTGGTGATCAGCAGCTTATTTAATGCGCCGCCACCCGCGCGGGTGGGTATGGCCGTAGTGAACTTTTCCG
CGGGCGCGCGAACCCATTGGCATAGCCATCCACTCGGGCAAATGCTATTGGTCACTCAAGGTGAAGGCTGGACCCAGTGT
GAAGGGGGGGAGCGCACCACGATTCGCCCCGGGGATTTGATTTGGTGTAATTGTGGTAAGCGTCATTGGCATGGTGCAAC
AGCATCATCTTCCATGCAGCATGTGGCCGTTCAAGAGGCGCTTGATGGTAAACCGGTCGATTGGTTTGAACCTGTTACTG
ATACAGTGTACTTAAATAGCGGCAGTGTCAGCGAGTAA

Upstream 100 bases:

>100_bases
AGGTTATTTCATTTGTTAAAAGGACGGTTTGCGGATCATTCCCCATGCCGCCATCACTTTTAAAAATCAGTTTAAGACAA
CGTCAGTAAAGGAGTTTTTA

Downstream 100 bases:

>100_bases
CTCAATCACTGGCGAAAGTACTCGGAATTTAAAATAAAAGGCGAACTCAGTGTCGCCTTTTTTGCTTTTGATGTTTTGCT
TTTGATGTTGTGCTTTTGAT

Product: cupin 2 domain-containing protein

Products: NA

Alternate protein names: Cupin 2 Domain-Containing Protein; Carboxymuconolactone Decarboxylase; Cupin 2 Conserved Barrel Domain-Containing Protein; Transcriptional Regulator; Cupin Family Protein; Cupin 2 Barrel; Cupin Domain-Containing Protein; Cupin Region; 4-Carboxymuconolactone Decarboxylase; Cupin Domain Protein; Double-Stranded Beta-Helix-Like Protein; Cupin 2 Barrel Domain-Containing Protein; RmlC-Type Cupin; Carboxymuconolactone Decarboxylase Family Protein; Exported RmlC-Type Cupin; LOW QUALITY PROTEIN Cupin Domain-Containing Protein; ABC-2 Type Transporter; LOW QUALITY PROTEIN Carboxymuconolactone Decarboxylase; Double-Stranded Beta-Helix Protein; Secreted Protein

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MNTLETASMTLIPAGTQQPIKGPSEWFTGEVVISSLFNAPPPARVGMAVVNFSAGARTHWHSHPLGQMLLVTQGEGWTQC
EGGERTTIRPGDLIWCNCGKRHWHGATASSSMQHVAVQEALDGKPVDWFEPVTDTVYLNSGSVSE

Sequences:

>Translated_145_residues
MNTLETASMTLIPAGTQQPIKGPSEWFTGEVVISSLFNAPPPARVGMAVVNFSAGARTHWHSHPLGQMLLVTQGEGWTQC
EGGERTTIRPGDLIWCNCGKRHWHGATASSSMQHVAVQEALDGKPVDWFEPVTDTVYLNSGSVSE
>Mature_145_residues
MNTLETASMTLIPAGTQQPIKGPSEWFTGEVVISSLFNAPPPARVGMAVVNFSAGARTHWHSHPLGQMLLVTQGEGWTQC
EGGERTTIRPGDLIWCNCGKRHWHGATASSSMQHVAVQEALDGKPVDWFEPVTDTVYLNSGSVSE

Specific function: Unknown

COG id: COG1917

COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15673; Mature: 15673

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTLETASMTLIPAGTQQPIKGPSEWFTGEVVISSLFNAPPPARVGMAVVNFSAGARTHW
CCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHCEEEEEECCCCCCCC
HSHPLGQMLLVTQGEGWTQCEGGERTTIRPGDLIWCNCGKRHWHGATASSSMQHVAVQEA
CCCCCCEEEEEECCCCCCCCCCCCCCEECCCCEEEEECCCCCCCCCCCCCCHHHHHHHHH
LDGKPVDWFEPVTDTVYLNSGSVSE
HCCCCCCCCCCCCCEEEECCCCCCC
>Mature Secondary Structure
MNTLETASMTLIPAGTQQPIKGPSEWFTGEVVISSLFNAPPPARVGMAVVNFSAGARTHW
CCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHCEEEEEECCCCCCCC
HSHPLGQMLLVTQGEGWTQCEGGERTTIRPGDLIWCNCGKRHWHGATASSSMQHVAVQEA
CCCCCCEEEEEECCCCCCCCCCCCCCEECCCCEEEEECCCCCCCCCCCCCCHHHHHHHHH
LDGKPVDWFEPVTDTVYLNSGSVSE
HCCCCCCCCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA