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The map label for this gene is 117920111

Identifier: 117920111

GI number: 117920111

Start: 1955402

End: 1956004

Strand: Reverse

Name: 117920111

Synonym: Shewana3_1664

Alternate gene names: NA

Gene position: 1956004-1955402 (Counterclockwise)

Preceding gene: 117920112

Following gene: 117920110

Centisome position: 39.34

GC content: 49.59

Gene sequence:

>603_bases
ATGTACCAGATTGCGATTGTGATATTTGATGAATTTACCGATATCGATTTCTTTTTAATGCGCGATATTCTTGGCCGCAC
AACAACCGATTGGACAGTCAAAGTGCTAGGTACCAAACCAAGCCACAGGTCAAGTTTGGGAATGACGGTAGAAACCCATG
GTCATGTCTCCGAAATCGCCGATGCTGACGTGGTATTATTCAGCAGTGGCTACAAAGGCGTACCTGCCGCACTTGCGGAT
CCTGAGTTTATGTCGGCCCTTAAATTAGATCCCACACGGCAATTGCTTGGCAGTATTTGTGCAGGCTCATTCTTCTTTGC
CAAGTTAGGCTTACTCGACAATATTTCGGCAACAACGCACCCCGATGCCAAACCCGCATTGGTAGCTATGGGCGTGGAGG
TGGAAGACTCTGCTCTGGTGGTCAATGGCAATATTGCCACTGCAGGAGGTTGTCTGTCCTCACTCTATTTAACGGGTTGG
GTTGCGGAGCGCTTGTTCGACAGTGCAAAGCGTCGCGAAATTCATCGGCAACTGCTCCCCGCAGGCCAAGCCGATGTGTT
TGACGCTTTAATCGAGTCGTCGATTGCCTCAGCCATTCGCTAA

Upstream 100 bases:

>100_bases
ATTAACCATGCATTCCAATAACCCCATTTTGATAACCCCAGACTTATGGTTGAGCCTATTCAAGCCTTAAGTCATCCCAA
TGCAAACGAGAGGACAAAGG

Downstream 100 bases:

>100_bases
TATGGTGTGCAATCCTCTGGATAAAGGGCGCAATTATGACACTCAAAGCATTACTCAATCAGTTAAAAACCGAGCACAAG
ATCACCAGCGCAGCCGAACT

Product: ThiJ/PfpI domain-containing protein

Products: NA

Alternate protein names: ThiJ/PfpI Family Protein; DJ-1/PfpI Family Protein; ThiJ/PfpI Domain Protein; Transcriptional Regulator; Intracellular Protease/Amidase; AraC Family Transcription Regulator; Transcriptional Regulator AraC Family; DJ-1/PfpI Family; AraC-Family Transcriptional Regulator; AraC Family Transcriptional Regulator

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MYQIAIVIFDEFTDIDFFLMRDILGRTTTDWTVKVLGTKPSHRSSLGMTVETHGHVSEIADADVVLFSSGYKGVPAALAD
PEFMSALKLDPTRQLLGSICAGSFFFAKLGLLDNISATTHPDAKPALVAMGVEVEDSALVVNGNIATAGGCLSSLYLTGW
VAERLFDSAKRREIHRQLLPAGQADVFDALIESSIASAIR

Sequences:

>Translated_200_residues
MYQIAIVIFDEFTDIDFFLMRDILGRTTTDWTVKVLGTKPSHRSSLGMTVETHGHVSEIADADVVLFSSGYKGVPAALAD
PEFMSALKLDPTRQLLGSICAGSFFFAKLGLLDNISATTHPDAKPALVAMGVEVEDSALVVNGNIATAGGCLSSLYLTGW
VAERLFDSAKRREIHRQLLPAGQADVFDALIESSIASAIR
>Mature_200_residues
MYQIAIVIFDEFTDIDFFLMRDILGRTTTDWTVKVLGTKPSHRSSLGMTVETHGHVSEIADADVVLFSSGYKGVPAALAD
PEFMSALKLDPTRQLLGSICAGSFFFAKLGLLDNISATTHPDAKPALVAMGVEVEDSALVVNGNIATAGGCLSSLYLTGW
VAERLFDSAKRREIHRQLLPAGQADVFDALIESSIASAIR

Specific function: Unknown

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21506; Mature: 21506

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYQIAIVIFDEFTDIDFFLMRDILGRTTTDWTVKVLGTKPSHRSSLGMTVETHGHVSEIA
CEEEEEEEEECCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCEEECCCCHHHHC
DADVVLFSSGYKGVPAALADPEFMSALKLDPTRQLLGSICAGSFFFAKLGLLDNISATTH
CCCEEEEECCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCC
PDAKPALVAMGVEVEDSALVVNGNIATAGGCLSSLYLTGWVAERLFDSAKRREIHRQLLP
CCCCCEEEEECCEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AGQADVFDALIESSIASAIR
CCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MYQIAIVIFDEFTDIDFFLMRDILGRTTTDWTVKVLGTKPSHRSSLGMTVETHGHVSEIA
CEEEEEEEEECCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCEEECCCCHHHHC
DADVVLFSSGYKGVPAALADPEFMSALKLDPTRQLLGSICAGSFFFAKLGLLDNISATTH
CCCEEEEECCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCC
PDAKPALVAMGVEVEDSALVVNGNIATAGGCLSSLYLTGWVAERLFDSAKRREIHRQLLP
CCCCCEEEEECCEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AGQADVFDALIESSIASAIR
CCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA