Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

Click here to switch to the map view.

The map label for this gene is 117920112

Identifier: 117920112

GI number: 117920112

Start: 1956112

End: 1957143

Strand: Reverse

Name: 117920112

Synonym: Shewana3_1665

Alternate gene names: NA

Gene position: 1957143-1956112 (Counterclockwise)

Preceding gene: 117920113

Following gene: 117920111

Centisome position: 39.36

GC content: 45.16

Gene sequence:

>1032_bases
ATGCTCAAGTTGTTAGCTAAATTTCTCAATAAACGCAGTCGCAGTCGTAGACATATGCGCGATTATGCCAAAAACGTCTT
TGAATATGACCAGTATTTACTGACCGATTATATCGACAGTGGAATGACAGATGGTTTCGAAAGAGTGAAACAATATCGTG
AGTTTGATGAGGATTTTCGGCAATGGCAATTGTTTGGAGCTGAGTTTGGTGTACCCGAGTGTCATTGGGGCAATGTAGCC
CAACTTACCTATATTGAATCGGGCTTGCTGGAGCCTAAGCCGCTTATGTGCTCGCTTGCTTACGGCTATTTTCGTACCGC
GATAGACTACTATCAATACTACACTGCGGTTGAGAAAACAGGTGAAGTAGCTAATGCCGGATGGATGACAACCAGTGTTT
TTCGGCTTGTACTTATGCTGTTTTCTGAGCAGAAGACTGAGACTGACGAACTGTATCAAGCCTTGGCGACCGCCTGGCGC
GCTTGCTGGATAATTCGTTCCCACGGGTTTATCGGTGATTTTTTGGTGTTGTTATATGGGCGATATTTGGGTGTTATTGA
GCCGCCTTTTGCTACTGAAGTACAAGTGACACTTCGTAAAACAGCCTCCTTTCCCTATGCTGAATTTCTAGATAACTGGG
ATACTCAAGATGAAGTGTTTGTTCGCACTATGTTGCAAACCCTGTGTGACCATCAGGTAGAGCAAGCGGTTATCGGCGAT
AAAAAGTGCTTTTTTGAGTTCAACGGAGGACCACATACATATTTACCGCTAACAGCGTTAATGCTGCTGAAACTGCGGTC
TCTTAGAGGCTTGCCTAATCCGCAGTTCAGTCATCCCGCATTTGGCGATATAACAGCGTTGTTTGAGCAAGTCTCCACAG
CCTTTAGCGACTATGTCGCAGCAGAGAAGATCCAGCGGATTGAAGATGCGGCTGATGACGTGTTAACCCAGACATTAACC
AGAATGCAAAGCCAAGATTTTAATGCCCATGCTATTTTTGCCAAGCGACTCCCATCGTTGAGTGCTGGTTAA

Upstream 100 bases:

>100_bases
ACATCGTGTGCATTGGTGACTTGTATAGCCGCCGTTTTACTTCACAGTTAGCCACCAAGTATGCAGTTACGGTAAACTCA
CCGCAGACCAAATAGTAAGG

Downstream 100 bases:

>100_bases
GGTGTTGATTAACCATGCATTCCAATAACCCCATTTTGATAACCCCAGACTTATGGTTGAGCCTATTCAAGCCTTAAGTC
ATCCCAATGCAAACGAGAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MLKLLAKFLNKRSRSRRHMRDYAKNVFEYDQYLLTDYIDSGMTDGFERVKQYREFDEDFRQWQLFGAEFGVPECHWGNVA
QLTYIESGLLEPKPLMCSLAYGYFRTAIDYYQYYTAVEKTGEVANAGWMTTSVFRLVLMLFSEQKTETDELYQALATAWR
ACWIIRSHGFIGDFLVLLYGRYLGVIEPPFATEVQVTLRKTASFPYAEFLDNWDTQDEVFVRTMLQTLCDHQVEQAVIGD
KKCFFEFNGGPHTYLPLTALMLLKLRSLRGLPNPQFSHPAFGDITALFEQVSTAFSDYVAAEKIQRIEDAADDVLTQTLT
RMQSQDFNAHAIFAKRLPSLSAG

Sequences:

>Translated_343_residues
MLKLLAKFLNKRSRSRRHMRDYAKNVFEYDQYLLTDYIDSGMTDGFERVKQYREFDEDFRQWQLFGAEFGVPECHWGNVA
QLTYIESGLLEPKPLMCSLAYGYFRTAIDYYQYYTAVEKTGEVANAGWMTTSVFRLVLMLFSEQKTETDELYQALATAWR
ACWIIRSHGFIGDFLVLLYGRYLGVIEPPFATEVQVTLRKTASFPYAEFLDNWDTQDEVFVRTMLQTLCDHQVEQAVIGD
KKCFFEFNGGPHTYLPLTALMLLKLRSLRGLPNPQFSHPAFGDITALFEQVSTAFSDYVAAEKIQRIEDAADDVLTQTLT
RMQSQDFNAHAIFAKRLPSLSAG
>Mature_343_residues
MLKLLAKFLNKRSRSRRHMRDYAKNVFEYDQYLLTDYIDSGMTDGFERVKQYREFDEDFRQWQLFGAEFGVPECHWGNVA
QLTYIESGLLEPKPLMCSLAYGYFRTAIDYYQYYTAVEKTGEVANAGWMTTSVFRLVLMLFSEQKTETDELYQALATAWR
ACWIIRSHGFIGDFLVLLYGRYLGVIEPPFATEVQVTLRKTASFPYAEFLDNWDTQDEVFVRTMLQTLCDHQVEQAVIGD
KKCFFEFNGGPHTYLPLTALMLLKLRSLRGLPNPQFSHPAFGDITALFEQVSTAFSDYVAAEKIQRIEDAADDVLTQTLT
RMQSQDFNAHAIFAKRLPSLSAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39604; Mature: 39604

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKLLAKFLNKRSRSRRHMRDYAKNVFEYDQYLLTDYIDSGMTDGFERVKQYREFDEDFR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
QWQLFGAEFGVPECHWGNVAQLTYIESGLLEPKPLMCSLAYGYFRTAIDYYQYYTAVEKT
HHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GEVANAGWMTTSVFRLVLMLFSEQKTETDELYQALATAWRACWIIRSHGFIGDFLVLLYG
CCHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
RYLGVIEPPFATEVQVTLRKTASFPYAEFLDNWDTQDEVFVRTMLQTLCDHQVEQAVIGD
HHHCCCCCCCCCHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
KKCFFEFNGGPHTYLPLTALMLLKLRSLRGLPNPQFSHPAFGDITALFEQVSTAFSDYVA
CEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
AEKIQRIEDAADDVLTQTLTRMQSQDFNAHAIFAKRLPSLSAG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLKLLAKFLNKRSRSRRHMRDYAKNVFEYDQYLLTDYIDSGMTDGFERVKQYREFDEDFR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
QWQLFGAEFGVPECHWGNVAQLTYIESGLLEPKPLMCSLAYGYFRTAIDYYQYYTAVEKT
HHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GEVANAGWMTTSVFRLVLMLFSEQKTETDELYQALATAWRACWIIRSHGFIGDFLVLLYG
CCHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
RYLGVIEPPFATEVQVTLRKTASFPYAEFLDNWDTQDEVFVRTMLQTLCDHQVEQAVIGD
HHHCCCCCCCCCHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
KKCFFEFNGGPHTYLPLTALMLLKLRSLRGLPNPQFSHPAFGDITALFEQVSTAFSDYVA
CEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
AEKIQRIEDAADDVLTQTLTRMQSQDFNAHAIFAKRLPSLSAG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA