| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
Click here to switch to the map view.
The map label for this gene is trpE [H]
Identifier: 117919968
GI number: 117919968
Start: 1770319
End: 1772010
Strand: Reverse
Name: trpE [H]
Synonym: Shewana3_1520
Alternate gene names: 117919968
Gene position: 1772010-1770319 (Counterclockwise)
Preceding gene: 117919976
Following gene: 117919967
Centisome position: 35.64
GC content: 51.6
Gene sequence:
>1692_bases ATGACCCTAAAGACATTTAATCAGGTTACCCAAGTTGATGGCGCGCATTTTGCCCCGTCTCAACAGACATTCGCACGTTC GCATACGCTCAAGGCGACGCTGGCATATCATAGCGACCCACTGCGCCTGTACCAGCACATCACCCAAGATGTACCCCATA CCATGTTGTTAGAATCGGCAGAAATCGACAGCAAGGAAAATCTTAAGAGCATGGTGATGACCCATGCGGCGCTGATGATC CGCTGCGATGGCTATCGTTTACGCTTTAGCGCACTGAGTGACAATGGCGTCAGTTTACTCGCCCCCATCGAGCAATTTTT TATTGCTCGTTCAAGCCAAACTCAATGCCAACGCGATGGCCACAACTTAGTGGTCACGCTGCAAAAGGACACTGAGCTTA AGGATGAAGATGCCCGCTTAAAATCCACCTCGCCCCTCGATGGTTTGCGCTTGTTTGTAAAGCATATCGACTGCGGCCAG ACGCCAGCATTCGAAGACTTATTTTTAGGTGGCGTGCTCTCCTACGATTTGATTGATACCGTCGAGCCACTGCCTGAAGC ACCAAATGGTGCAAATGATTGTCCTGATTATTTATTTTATCTCGCCGAAACCTTAATTCTTATCGATCACAAGCAAAAAC ACGCCGAGATCATCACTCACAACTTCAGTGAAGGCACTGAACAACATTTAGAGGTGACCCAAGCCTTAGCCGAGCGAGCA GAGAACATCAGCGCCCAATGTGAAGCCCTAGCCAAGAGTGCAACACCTGCACCCGCCCTCGTCGGCATAACGGCCACAGA GCAAGTGAATGTTAGTGATGATGACTTCAAGCAAACCGTTATTGATTTAAAAGAACACATTATTGCCGGCGACATCTTCC AAGTCGTGCCTTCACGCAGCTTTAGCCTGCCCTGCCCCGATACCTTGGGAGCTTACCGCGCACTACGTTTAACCAACCCC AGCCCCTATATGTTTTATTTCAGGGGCTATGACTTCACCCTGTTTGGCGCCTCGCCCGAGAGCGCGCTGAAATATGAAGC CAGCAATAATCAGGTCGAAGTCTACCCGATTGCAGGCACCCGTAAACGCGGCAAAACCGCCAGCGGCGAGATCGATTTCG ACCTCGATAGCCGTATCGAACTCGAATTGCGTTTGGATAAAAAAGAGCTCTCCGAACATTTAATGTTGGTCGATTTAGCC CGTAACGATATCGCCCGTATCAGCCAAAGCGGCAGCCGCAAAGTGGCCGAGTTACTTAAAGTCGACCGTTATTCCCACGT CATGCACTTAGTCAGCCGCGTCACAGGTCAACTACGCCAAGACTTAGATGCACTCCACGCCTATCAGGCCTGTATGAATA TGGGCACGCTAGTTGGCGCCCCGAAAGTGCGCGCCTCTCAATTGGTGCGTCAAGCAGAAAAGACCCGCCGCGGCAGCTAC GGCGGCGCTGTGGGTTACCTCAACGCCCTTGGGGATATGGACACCTGTATCGTTATCCGCTCCGCCTTTGTGAAAAACGG CGTTGCCCATATCCAAGCGGGTGCTGGCGTGGTGTTTGATTCCGATCCGCAGAGTGAAGCCGATGAAACCCGCCAAAAGG CGCAGGCTGTGATTTCGGCCATCAAGATGGGCGCAGGCTTGGATGAAAGCCAGCAAGCAACTGCGACCACTACGACTGAA CAACAAAGATAA
Upstream 100 bases:
>100_bases AAAGTAACAGAATCAACAAAAAAGCCCGCAGAAATGCGGGCTTTTTTGTTGGTGCGAAAAATGTCTGCAACGCGGTAAAC GGATAAAAAGCGAGATAAGC
Downstream 100 bases:
>100_bases GGAGCCCAAGATGAAACTCTATTTACTCGATAACTTCGACTCCTTTACCTACAACTTAGTCGACCAATTTAGAAGCCTTG GCTGTGAAGTGGTGATCTAC
Product: anthranilate synthase component I
Products: NA
Alternate protein names: Anthranilate synthase component I [H]
Number of amino acids: Translated: 563; Mature: 562
Protein sequence:
>563_residues MTLKTFNQVTQVDGAHFAPSQQTFARSHTLKATLAYHSDPLRLYQHITQDVPHTMLLESAEIDSKENLKSMVMTHAALMI RCDGYRLRFSALSDNGVSLLAPIEQFFIARSSQTQCQRDGHNLVVTLQKDTELKDEDARLKSTSPLDGLRLFVKHIDCGQ TPAFEDLFLGGVLSYDLIDTVEPLPEAPNGANDCPDYLFYLAETLILIDHKQKHAEIITHNFSEGTEQHLEVTQALAERA ENISAQCEALAKSATPAPALVGITATEQVNVSDDDFKQTVIDLKEHIIAGDIFQVVPSRSFSLPCPDTLGAYRALRLTNP SPYMFYFRGYDFTLFGASPESALKYEASNNQVEVYPIAGTRKRGKTASGEIDFDLDSRIELELRLDKKELSEHLMLVDLA RNDIARISQSGSRKVAELLKVDRYSHVMHLVSRVTGQLRQDLDALHAYQACMNMGTLVGAPKVRASQLVRQAEKTRRGSY GGAVGYLNALGDMDTCIVIRSAFVKNGVAHIQAGAGVVFDSDPQSEADETRQKAQAVISAIKMGAGLDESQQATATTTTE QQR
Sequences:
>Translated_563_residues MTLKTFNQVTQVDGAHFAPSQQTFARSHTLKATLAYHSDPLRLYQHITQDVPHTMLLESAEIDSKENLKSMVMTHAALMI RCDGYRLRFSALSDNGVSLLAPIEQFFIARSSQTQCQRDGHNLVVTLQKDTELKDEDARLKSTSPLDGLRLFVKHIDCGQ TPAFEDLFLGGVLSYDLIDTVEPLPEAPNGANDCPDYLFYLAETLILIDHKQKHAEIITHNFSEGTEQHLEVTQALAERA ENISAQCEALAKSATPAPALVGITATEQVNVSDDDFKQTVIDLKEHIIAGDIFQVVPSRSFSLPCPDTLGAYRALRLTNP SPYMFYFRGYDFTLFGASPESALKYEASNNQVEVYPIAGTRKRGKTASGEIDFDLDSRIELELRLDKKELSEHLMLVDLA RNDIARISQSGSRKVAELLKVDRYSHVMHLVSRVTGQLRQDLDALHAYQACMNMGTLVGAPKVRASQLVRQAEKTRRGSY GGAVGYLNALGDMDTCIVIRSAFVKNGVAHIQAGAGVVFDSDPQSEADETRQKAQAVISAIKMGAGLDESQQATATTTTE QQR >Mature_562_residues TLKTFNQVTQVDGAHFAPSQQTFARSHTLKATLAYHSDPLRLYQHITQDVPHTMLLESAEIDSKENLKSMVMTHAALMIR CDGYRLRFSALSDNGVSLLAPIEQFFIARSSQTQCQRDGHNLVVTLQKDTELKDEDARLKSTSPLDGLRLFVKHIDCGQT PAFEDLFLGGVLSYDLIDTVEPLPEAPNGANDCPDYLFYLAETLILIDHKQKHAEIITHNFSEGTEQHLEVTQALAERAE NISAQCEALAKSATPAPALVGITATEQVNVSDDDFKQTVIDLKEHIIAGDIFQVVPSRSFSLPCPDTLGAYRALRLTNPS PYMFYFRGYDFTLFGASPESALKYEASNNQVEVYPIAGTRKRGKTASGEIDFDLDSRIELELRLDKKELSEHLMLVDLAR NDIARISQSGSRKVAELLKVDRYSHVMHLVSRVTGQLRQDLDALHAYQACMNMGTLVGAPKVRASQLVRQAEKTRRGSYG GAVGYLNALGDMDTCIVIRSAFVKNGVAHIQAGAGVVFDSDPQSEADETRQKAQAVISAIKMGAGLDESQQATATTTTEQ QR
Specific function: Tryptophan biosynthesis; first step. [C]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1787518, Length=507, Percent_Identity=54.2406311637081, Blast_Score=512, Evalue=1e-146, Organism=Escherichia coli, GI1788114, Length=488, Percent_Identity=28.4836065573771, Blast_Score=169, Evalue=4e-43, Organism=Escherichia coli, GI87082077, Length=301, Percent_Identity=27.2425249169435, Blast_Score=72, Evalue=7e-14, Organism=Saccharomyces cerevisiae, GI6320935, Length=445, Percent_Identity=35.9550561797753, Blast_Score=232, Evalue=1e-61, Organism=Saccharomyces cerevisiae, GI6324361, Length=394, Percent_Identity=24.3654822335025, Blast_Score=79, Evalue=2e-15,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR005257 - InterPro: IPR015890 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =4.1.3.27 [H]
Molecular weight: Translated: 62124; Mature: 61993
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLKTFNQVTQVDGAHFAPSQQTFARSHTLKATLAYHSDPLRLYQHITQDVPHTMLLESA CCCCHHHHHHHCCCCCCCCCHHHHHHHHCEEEEEEECCCHHHHHHHHHHCCCHHHHHHCC EIDSKENLKSMVMTHAALMIRCDGYRLRFSALSDNGVSLLAPIEQFFIARSSQTQCQRDG CCCCHHHHHHHHHHHHHHEEEECCEEEEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHCC HNLVVTLQKDTELKDEDARLKSTSPLDGLRLFVKHIDCGQTPAFEDLFLGGVLSYDLIDT CEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH VEPLPEAPNGANDCPDYLFYLAETLILIDHKQKHAEIITHNFSEGTEQHLEVTQALAERA HHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHH ENISAQCEALAKSATPAPALVGITATEQVNVSDDDFKQTVIDLKEHIIAGDIFQVVPSRS HCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC FSLPCPDTLGAYRALRLTNPSPYMFYFRGYDFTLFGASPESALKYEASNNQVEVYPIAGT CCCCCCHHHHHHEEEEECCCCCEEEEEECCEEEEECCCCCHHEEEECCCCEEEEEECCCC RKRGKTASGEIDFDLDSRIELELRLDKKELSEHLMLVDLARNDIARISQSGSRKVAELLK CCCCCCCCCCEEECCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH VDRYSHVMHLVSRVTGQLRQDLDALHAYQACMNMGTLVGAPKVRASQLVRQAEKTRRGSY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHCCCC GGAVGYLNALGDMDTCIVIRSAFVKNGVAHIQAGAGVVFDSDPQSEADETRQKAQAVISA CCHHHHHHHHCCCHHHHHHHHHHHHCCHHEEECCCCEEECCCCCCHHHHHHHHHHHHHHH IKMGAGLDESQQATATTTTEQQR HHHCCCCCCCCCCCEECCCCCCC >Mature Secondary Structure TLKTFNQVTQVDGAHFAPSQQTFARSHTLKATLAYHSDPLRLYQHITQDVPHTMLLESA CCCHHHHHHHCCCCCCCCCHHHHHHHHCEEEEEEECCCHHHHHHHHHHCCCHHHHHHCC EIDSKENLKSMVMTHAALMIRCDGYRLRFSALSDNGVSLLAPIEQFFIARSSQTQCQRDG CCCCHHHHHHHHHHHHHHEEEECCEEEEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHCC HNLVVTLQKDTELKDEDARLKSTSPLDGLRLFVKHIDCGQTPAFEDLFLGGVLSYDLIDT CEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH VEPLPEAPNGANDCPDYLFYLAETLILIDHKQKHAEIITHNFSEGTEQHLEVTQALAERA HHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHH ENISAQCEALAKSATPAPALVGITATEQVNVSDDDFKQTVIDLKEHIIAGDIFQVVPSRS HCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC FSLPCPDTLGAYRALRLTNPSPYMFYFRGYDFTLFGASPESALKYEASNNQVEVYPIAGT CCCCCCHHHHHHEEEEECCCCCEEEEEECCEEEEECCCCCHHEEEECCCCEEEEEECCCC RKRGKTASGEIDFDLDSRIELELRLDKKELSEHLMLVDLARNDIARISQSGSRKVAELLK CCCCCCCCCCEEECCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH VDRYSHVMHLVSRVTGQLRQDLDALHAYQACMNMGTLVGAPKVRASQLVRQAEKTRRGSY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHCCCC GGAVGYLNALGDMDTCIVIRSAFVKNGVAHIQAGAGVVFDSDPQSEADETRQKAQAVISA CCHHHHHHHHCCCHHHHHHHHHHHHCCHHEEECCCCEEECCCCCCHHHHHHHHHHHHHHH IKMGAGLDESQQATATTTTEQQR HHHCCCCCCCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1773058; 12620739 [H]