| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117919933
Identifier: 117919933
GI number: 117919933
Start: 1729393
End: 1729680
Strand: Reverse
Name: 117919933
Synonym: Shewana3_1485
Alternate gene names: NA
Gene position: 1729680-1729393 (Counterclockwise)
Preceding gene: 117919936
Following gene: 117919932
Centisome position: 34.79
GC content: 45.49
Gene sequence:
>288_bases ATGAATACACTGACCTTACCAAGCCCTACACCCCCCGTCTTTAAGCCTGCGCTTGCCTTAAGATTCAATCAATTAGTGAT CTTCCACAGCCTGTTATTGCTGGCGTTAAGTCTACTTTGTGAAATGGGGCTAAAAAGGCTTGGGCTTGAGACACCTTACC TTTCTTGGGGAGTTTTCCTGTATTTGCCCGTGGCAGTAAGCCTATCTTTGCTATTAAAACATAGGGTTAGCCGACGCAGT CTGGTATGGCTTTTCGGACTATGGATGCTGTTATGGCTGGTAATGTAA
Upstream 100 bases:
>100_bases TGCGGCAATGGAACACTAAAGCTGTGTAAATTTAGTTGAGAATAATTCTCATCTAAAACTAAAATCCCTTGCATCGGTTA CGAGGAATTGAGAAAAAGAG
Downstream 100 bases:
>100_bases GCCCCGTTTTTAAGCCTTGCACTGATACCCACACCTACATCCGCTTCGGCAAAAATAAAGAGTGCCGCCCCAAACACCTT GCCCCGCCTTTACTCCTACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 95; Mature: 95
Protein sequence:
>95_residues MNTLTLPSPTPPVFKPALALRFNQLVIFHSLLLLALSLLCEMGLKRLGLETPYLSWGVFLYLPVAVSLSLLLKHRVSRRS LVWLFGLWMLLWLVM
Sequences:
>Translated_95_residues MNTLTLPSPTPPVFKPALALRFNQLVIFHSLLLLALSLLCEMGLKRLGLETPYLSWGVFLYLPVAVSLSLLLKHRVSRRS LVWLFGLWMLLWLVM >Mature_95_residues MNTLTLPSPTPPVFKPALALRFNQLVIFHSLLLLALSLLCEMGLKRLGLETPYLSWGVFLYLPVAVSLSLLLKHRVSRRS LVWLFGLWMLLWLVM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10876; Mature: 10876
Theoretical pI: Translated: 11.10; Mature: 11.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTLTLPSPTPPVFKPALALRFNQLVIFHSLLLLALSLLCEMGLKRLGLETPYLSWGVFL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH YLPVAVSLSLLLKHRVSRRSLVWLFGLWMLLWLVM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MNTLTLPSPTPPVFKPALALRFNQLVIFHSLLLLALSLLCEMGLKRLGLETPYLSWGVFL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH YLPVAVSLSLLLKHRVSRRSLVWLFGLWMLLWLVM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA