Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

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The map label for this gene is 117919905

Identifier: 117919905

GI number: 117919905

Start: 1690289

End: 1690882

Strand: Reverse

Name: 117919905

Synonym: Shewana3_1457

Alternate gene names: NA

Gene position: 1690882-1690289 (Counterclockwise)

Preceding gene: 117919906

Following gene: 117919904

Centisome position: 34.01

GC content: 50.84

Gene sequence:

>594_bases
GTGAACCCACAAACTCTAAATCCAGCCTTGGATAAGGCTGCCACGCCAAATCCCGCTTTGGCGGATTTACAAGATATTAT
TCTCCCCGACCCGATTGGGGCTTGGCCATGGGCCATAGGTTATTGGTTAGCACTCGCTATCCTGTTGGTTTTATTGATTG
CCGCAATTCTTTGGCTCAAAAAACGTGCCGCCTACTTAGCGCCTAAAAAAGCCGCCCAAGGTTTATTTGCAGCACTTGAT
CCTCATTCAACCCAGTATCCCTCTGACGTGAATCAGCTGTTGAAGCGCACCGTCTTAAGTTATCTGCCAAGGGAAGTGAT
AGCAAAACTCGACGGCCCCGCATGGGCAACCTGGTTAGATAGCCATTTGCCCGCAAAGCAGCGCGGCCGCATTGGGCCCT
TATTAGAAAAACGTCACCAAGCTAAACCACTCAGCGCCAAGGAGGCCCTTGAGTTACAGACCCTCGCCCGCAGCTGGTTT
GCCTCAAAAGCCAAATTAAGCGCACCAGTAATGCACTCTACTGCAAACCAAAACCCAGCTACAACAGCAGTATTAACACC
GGCTCCAGCTAAGCCTGCGGAGGAGCAATGTTAA

Upstream 100 bases:

>100_bases
TTTACCCCTTGCGCAACAGTTAGCCTTACTGCAATAACAGCACGGCAAATAAGTGAGTAATAGTAGACAGTGCAACTTAA
AGCATAAGTGAGTCCAAAGC

Downstream 100 bases:

>100_bases
CAGTCGCATGGCCTTTGGCATTGATTTTACTGCCTTTACCTTTTATTTTTTGGCGTCGCCAAACGGTGCAAGCCGAAGGT
GGCCGCCTGCAATTGCCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MNPQTLNPALDKAATPNPALADLQDIILPDPIGAWPWAIGYWLALAILLVLLIAAILWLKKRAAYLAPKKAAQGLFAALD
PHSTQYPSDVNQLLKRTVLSYLPREVIAKLDGPAWATWLDSHLPAKQRGRIGPLLEKRHQAKPLSAKEALELQTLARSWF
ASKAKLSAPVMHSTANQNPATTAVLTPAPAKPAEEQC

Sequences:

>Translated_197_residues
MNPQTLNPALDKAATPNPALADLQDIILPDPIGAWPWAIGYWLALAILLVLLIAAILWLKKRAAYLAPKKAAQGLFAALD
PHSTQYPSDVNQLLKRTVLSYLPREVIAKLDGPAWATWLDSHLPAKQRGRIGPLLEKRHQAKPLSAKEALELQTLARSWF
ASKAKLSAPVMHSTANQNPATTAVLTPAPAKPAEEQC
>Mature_197_residues
MNPQTLNPALDKAATPNPALADLQDIILPDPIGAWPWAIGYWLALAILLVLLIAAILWLKKRAAYLAPKKAAQGLFAALD
PHSTQYPSDVNQLLKRTVLSYLPREVIAKLDGPAWATWLDSHLPAKQRGRIGPLLEKRHQAKPLSAKEALELQTLARSWF
ASKAKLSAPVMHSTANQNPATTAVLTPAPAKPAEEQC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21420; Mature: 21420

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPQTLNPALDKAATPNPALADLQDIILPDPIGAWPWAIGYWLALAILLVLLIAAILWLK
CCCCCCCHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KRAAYLAPKKAAQGLFAALDPHSTQYPSDVNQLLKRTVLSYLPREVIAKLDGPAWATWLD
HHHHHHCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
SHLPAKQRGRIGPLLEKRHQAKPLSAKEALELQTLARSWFASKAKLSAPVMHSTANQNPA
HCCCHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCC
TTAVLTPAPAKPAEEQC
CEEEECCCCCCCCCCCC
>Mature Secondary Structure
MNPQTLNPALDKAATPNPALADLQDIILPDPIGAWPWAIGYWLALAILLVLLIAAILWLK
CCCCCCCHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KRAAYLAPKKAAQGLFAALDPHSTQYPSDVNQLLKRTVLSYLPREVIAKLDGPAWATWLD
HHHHHHCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
SHLPAKQRGRIGPLLEKRHQAKPLSAKEALELQTLARSWFASKAKLSAPVMHSTANQNPA
HCCCHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCC
TTAVLTPAPAKPAEEQC
CEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA