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The map label for this gene is 117919904

Identifier: 117919904

GI number: 117919904

Start: 1689279

End: 1690295

Strand: Reverse

Name: 117919904

Synonym: Shewana3_1456

Alternate gene names: NA

Gene position: 1690295-1689279 (Counterclockwise)

Preceding gene: 117919905

Following gene: 117919903

Centisome position: 33.99

GC content: 50.64

Gene sequence:

>1017_bases
ATGTTAACAGTCGCATGGCCTTTGGCATTGATTTTACTGCCTTTACCTTTTATTTTTTGGCGTCGCCAAACGGTGCAAGC
CGAAGGTGGCCGCCTGCAATTGCCCGGTATTAGTCAAACGGACAAGGCCAATATCACTAGCCACAGCCGCCAAAGCCGCA
AACGTTATTGGTTGATGTGGAGCTTGTTAGTGCTTGCTATCGCCCGCCCACAATGGCTCGGCGATCCGATTGAACTACCA
AGCCAAGGGCGGGATCTGATGCTGGCGGTGGATTTATCCGGCAGTATGCAGATTGAAGATATGGTGATTAACGGCAAAGT
GGTCGACCGTTTTACCCTGATCCAACACGTGGTCAGTGAGTTTATTGAGCGTCGCAAAGGTGATCGTATCGGTTTGATTT
TATTTGCCGATCACGCCTATCTACAGGCACCACTCACCCAAGATAGACGCTCTGTCGCCCAGTTTTTAAAGGAGGCGCAG
ATTGGCCTTGTCGGTAAACAAACGGCGATCGGCGAGTCGATTGCGCTCGCGGTCAAGCGCTTCGACAAAATGGATGAGAG
TAACAGAGTCTTGATTTTATTGACTGACGGTTCAAATAACGCCGGTAATATCGAGCCTGAGCAAGCGGCACAAATCGCCG
CTAATCGCAAAGTGACGATTTATACCGTGGGCGTGGGTGCCGATGTTATGGAAAGACGCACCCTGTTTGGTCGTGAGCGC
GTCAATCCGTCGATGGATCTCGATGAAAACCAACTCAAGCATATTGCCGATGTTACCCATGGCCGCTATTTCCGCGCCCG
TAACAGTCAAGAGCTGGAACAGATTTATCAAGAAATAGACAAACTGGAGCCCGTGAGTCGCGATCAACTCAGCTATCGTC
CTCAAGCGGAACTATTCTATTGGCCGCTCGCCCTCGCGCTGCTCACCAGCATTTGGATAGCCTTAGGTCAGTTATCACTG
TTTTCGCGGACTAAAAACCCTGTTCCATCTGCAACACCACGGGGGGATGTTCGTTAA

Upstream 100 bases:

>100_bases
AAGCCAAATTAAGCGCACCAGTAATGCACTCTACTGCAAACCAAAACCCAGCTACAACAGCAGTATTAACACCGGCTCCA
GCTAAGCCTGCGGAGGAGCA

Downstream 100 bases:

>100_bases
TGAGCCTGCATTTTATTCGTCCAGAATGGTTACTCGCCCTGTTGCCACTCGCCATCATCCTGTGGGCGCTGTGGCGCCAA
CACCAGAGTAATAGCGCCTG

Product: von Willebrand factor, type A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MLTVAWPLALILLPLPFIFWRRQTVQAEGGRLQLPGISQTDKANITSHSRQSRKRYWLMWSLLVLAIARPQWLGDPIELP
SQGRDLMLAVDLSGSMQIEDMVINGKVVDRFTLIQHVVSEFIERRKGDRIGLILFADHAYLQAPLTQDRRSVAQFLKEAQ
IGLVGKQTAIGESIALAVKRFDKMDESNRVLILLTDGSNNAGNIEPEQAAQIAANRKVTIYTVGVGADVMERRTLFGRER
VNPSMDLDENQLKHIADVTHGRYFRARNSQELEQIYQEIDKLEPVSRDQLSYRPQAELFYWPLALALLTSIWIALGQLSL
FSRTKNPVPSATPRGDVR

Sequences:

>Translated_338_residues
MLTVAWPLALILLPLPFIFWRRQTVQAEGGRLQLPGISQTDKANITSHSRQSRKRYWLMWSLLVLAIARPQWLGDPIELP
SQGRDLMLAVDLSGSMQIEDMVINGKVVDRFTLIQHVVSEFIERRKGDRIGLILFADHAYLQAPLTQDRRSVAQFLKEAQ
IGLVGKQTAIGESIALAVKRFDKMDESNRVLILLTDGSNNAGNIEPEQAAQIAANRKVTIYTVGVGADVMERRTLFGRER
VNPSMDLDENQLKHIADVTHGRYFRARNSQELEQIYQEIDKLEPVSRDQLSYRPQAELFYWPLALALLTSIWIALGQLSL
FSRTKNPVPSATPRGDVR
>Mature_338_residues
MLTVAWPLALILLPLPFIFWRRQTVQAEGGRLQLPGISQTDKANITSHSRQSRKRYWLMWSLLVLAIARPQWLGDPIELP
SQGRDLMLAVDLSGSMQIEDMVINGKVVDRFTLIQHVVSEFIERRKGDRIGLILFADHAYLQAPLTQDRRSVAQFLKEAQ
IGLVGKQTAIGESIALAVKRFDKMDESNRVLILLTDGSNNAGNIEPEQAAQIAANRKVTIYTVGVGADVMERRTLFGRER
VNPSMDLDENQLKHIADVTHGRYFRARNSQELEQIYQEIDKLEPVSRDQLSYRPQAELFYWPLALALLTSIWIALGQLSL
FSRTKNPVPSATPRGDVR

Specific function: Unknown

COG id: COG2304

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 VWFA domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002035 [H]

Pfam domain/function: PF00092 VWA [H]

EC number: NA

Molecular weight: Translated: 38279; Mature: 38279

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTVAWPLALILLPLPFIFWRRQTVQAEGGRLQLPGISQTDKANITSHSRQSRKRYWLMW
CEEEHHHHHHHHHHHHHHHHHHHHEECCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHH
SLLVLAIARPQWLGDPIELPSQGRDLMLAVDLSGSMQIEDMVINGKVVDRFTLIQHVVSE
HHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEECCHHHHHHHHHHHHHHH
FIERRKGDRIGLILFADHAYLQAPLTQDRRSVAQFLKEAQIGLVGKQTAIGESIALAVKR
HHHHHCCCEEEEEEEECCHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
FDKMDESNRVLILLTDGSNNAGNIEPEQAAQIAANRKVTIYTVGVGADVMERRTLFGRER
HHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHHH
VNPSMDLDENQLKHIADVTHGRYFRARNSQELEQIYQEIDKLEPVSRDQLSYRPQAELFY
CCCCCCCCHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHCCCCCCHHCCCCCCCHHHH
WPLALALLTSIWIALGQLSLFSRTKNPVPSATPRGDVR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLTVAWPLALILLPLPFIFWRRQTVQAEGGRLQLPGISQTDKANITSHSRQSRKRYWLMW
CEEEHHHHHHHHHHHHHHHHHHHHEECCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHH
SLLVLAIARPQWLGDPIELPSQGRDLMLAVDLSGSMQIEDMVINGKVVDRFTLIQHVVSE
HHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEECCHHHHHHHHHHHHHHH
FIERRKGDRIGLILFADHAYLQAPLTQDRRSVAQFLKEAQIGLVGKQTAIGESIALAVKR
HHHHHCCCEEEEEEEECCHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
FDKMDESNRVLILLTDGSNNAGNIEPEQAAQIAANRKVTIYTVGVGADVMERRTLFGRER
HHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHHH
VNPSMDLDENQLKHIADVTHGRYFRARNSQELEQIYQEIDKLEPVSRDQLSYRPQAELFY
CCCCCCCCHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHCCCCCCHHCCCCCCCHHHH
WPLALALLTSIWIALGQLSLFSRTKNPVPSATPRGDVR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]