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The map label for this gene is yaeB [H]

Identifier: 117919848

GI number: 117919848

Start: 1616142

End: 1616876

Strand: Reverse

Name: yaeB [H]

Synonym: Shewana3_1400

Alternate gene names: 117919848

Gene position: 1616876-1616142 (Counterclockwise)

Preceding gene: 117919849

Following gene: 117919847

Centisome position: 32.52

GC content: 49.8

Gene sequence:

>735_bases
ATGACATTTACCAACCAAATTACCGCTGTGGCCACCTGCCGTACCCCCTACAAACAAAAATTTGGCATTCCAAGGCAACC
TGGTTTGGTGGAAGCACGCGGTTATGTTGAGCTGGAAGGCCATATCAATCATCTCGACGCCGTGCGTGGCATCGAGCAAT
ATTCCCACCTTTGGCTGCTGTTTTGTTTCCATGAAAATCTCGCCCAAGGCTGGAAAACCACCGTACGCCCACCGCGTTTA
GGCGGTAATGAAAAACTCGGTGTATTCGCAACCCGCTCGACTTTTCGCCCAAACGGCATTGGCCAATCCGTGGTAAAACT
CCACCGAGTGGTGCAACGTAAAGGCAAAGTATGCCTGGAGATTTCAGGCATGGATCTTGTCGATGGCACGCCGATTATCG
ATATAAAGCCCTATATTCCCTTCTCAGATTCGATTGAAGGTGCCGTCGGCGGTATCGCTCAAGAAGCGCCTAAGCTGATT
AGCGTGGTTTTTTCCGAGCTCGCGGCAACGCAGATTAACGCCTATAGCAAACAGGACGCTTATACTGATTTGGCCGAACT
TATCCGCGGCGTACTCGGACAAGACCCTCGCCCTGCCTATAAAAAAGCCAAGGATGATCCCAAGCTATATCAAGTGGCTT
TGTATGACTTAGATATCTTTTGGCGGATGGCGGTTGATGAGGATGATCGGGAATATATTCAAGTGCTCGAACTCAAACCG
GGGAAATGTGGCTAA

Upstream 100 bases:

>100_bases
GACTAGTTCAAAGCGTGTATACTGCACGCCAATATTGATGTACTTAGCAACCTAGACCATCGGCGTTTGGGTTGTTGTCC
TTGCTTTAGGTATTTTTTGC

Downstream 100 bases:

>100_bases
ATGCAGACGCTAAACACAACCGCATTGCCTGATTATCAGAGCCAACACAAAAAGCGTCTGTCTTGGATGCCCTGGCTGTA
TTTTTCACTCAAAGAAAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MTFTNQITAVATCRTPYKQKFGIPRQPGLVEARGYVELEGHINHLDAVRGIEQYSHLWLLFCFHENLAQGWKTTVRPPRL
GGNEKLGVFATRSTFRPNGIGQSVVKLHRVVQRKGKVCLEISGMDLVDGTPIIDIKPYIPFSDSIEGAVGGIAQEAPKLI
SVVFSELAATQINAYSKQDAYTDLAELIRGVLGQDPRPAYKKAKDDPKLYQVALYDLDIFWRMAVDEDDREYIQVLELKP
GKCG

Sequences:

>Translated_244_residues
MTFTNQITAVATCRTPYKQKFGIPRQPGLVEARGYVELEGHINHLDAVRGIEQYSHLWLLFCFHENLAQGWKTTVRPPRL
GGNEKLGVFATRSTFRPNGIGQSVVKLHRVVQRKGKVCLEISGMDLVDGTPIIDIKPYIPFSDSIEGAVGGIAQEAPKLI
SVVFSELAATQINAYSKQDAYTDLAELIRGVLGQDPRPAYKKAKDDPKLYQVALYDLDIFWRMAVDEDDREYIQVLELKP
GKCG
>Mature_243_residues
TFTNQITAVATCRTPYKQKFGIPRQPGLVEARGYVELEGHINHLDAVRGIEQYSHLWLLFCFHENLAQGWKTTVRPPRLG
GNEKLGVFATRSTFRPNGIGQSVVKLHRVVQRKGKVCLEISGMDLVDGTPIIDIKPYIPFSDSIEGAVGGIAQEAPKLIS
VVFSELAATQINAYSKQDAYTDLAELIRGVLGQDPRPAYKKAKDDPKLYQVALYDLDIFWRMAVDEDDREYIQVLELKPG
KCG

Specific function: Unknown

COG id: COG1720

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0066 (virR) family [H]

Homologues:

Organism=Homo sapiens, GI118600979, Length=155, Percent_Identity=40, Blast_Score=105, Evalue=3e-23,
Organism=Escherichia coli, GI1786393, Length=220, Percent_Identity=50.4545454545455, Blast_Score=229, Evalue=1e-61,
Organism=Drosophila melanogaster, GI24586408, Length=138, Percent_Identity=40.5797101449275, Blast_Score=102, Evalue=2e-22,
Organism=Drosophila melanogaster, GI45552503, Length=138, Percent_Identity=40.5797101449275, Blast_Score=102, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001378 [H]

Pfam domain/function: PF01980 UPF0066 [H]

EC number: NA

Molecular weight: Translated: 27278; Mature: 27146

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: PS01318 UPF0066

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFTNQITAVATCRTPYKQKFGIPRQPGLVEARGYVELEGHINHLDAVRGIEQYSHLWLL
CCCCCCEEEEEECCCCHHHHCCCCCCCCEEECCCEEEECCCCHHHHHHHHHHHHHHHHHH
FCFHENLAQGWKTTVRPPRLGGNEKLGVFATRSTFRPNGIGQSVVKLHRVVQRKGKVCLE
HHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEEEE
ISGMDLVDGTPIIDIKPYIPFSDSIEGAVGGIAQEAPKLISVVFSELAATQINAYSKQDA
ECCCEEECCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YTDLAELIRGVLGQDPRPAYKKAKDDPKLYQVALYDLDIFWRMAVDEDDREYIQVLELKP
HHHHHHHHHHHHCCCCCCHHHCCCCCCCEEEEEEEEHEEEEEEECCCCCHHHHHHHCCCC
GKCG
CCCC
>Mature Secondary Structure 
TFTNQITAVATCRTPYKQKFGIPRQPGLVEARGYVELEGHINHLDAVRGIEQYSHLWLL
CCCCCEEEEEECCCCHHHHCCCCCCCCEEECCCEEEECCCCHHHHHHHHHHHHHHHHHH
FCFHENLAQGWKTTVRPPRLGGNEKLGVFATRSTFRPNGIGQSVVKLHRVVQRKGKVCLE
HHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEEEE
ISGMDLVDGTPIIDIKPYIPFSDSIEGAVGGIAQEAPKLISVVFSELAATQINAYSKQDA
ECCCEEECCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YTDLAELIRGVLGQDPRPAYKKAKDDPKLYQVALYDLDIFWRMAVDEDDREYIQVLELKP
HHHHHHHHHHHHCCCCCCHHHCCCCCCCEEEEEEEEHEEEEEEECCCCCHHHHHHHCCCC
GKCG
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1459951; 9278503 [H]