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The map label for this gene is 117919849

Identifier: 117919849

GI number: 117919849

Start: 1616971

End: 1617351

Strand: Reverse

Name: 117919849

Synonym: Shewana3_1401

Alternate gene names: NA

Gene position: 1617351-1616971 (Counterclockwise)

Preceding gene: 117919850

Following gene: 117919848

Centisome position: 32.53

GC content: 51.71

Gene sequence:

>381_bases
ATGAAAATCATCCTCTCAAGTGCATTAGTGCTAATGCTTAGCGCCTGTGCCAGCGATTACAGTTTTAACAGCAATTTGGA
CGGCGAGGCGATTAATGACTACTTCAAGGCGGGCGATGTCACGCTGTTTGAGGGCGATAGTTTGCCTAAAGGTCATTACG
AATTAAAAGGTTTGGTACAGGGCGAATCATGCCAAGCCGATGTGAATGCAGTGCCCGCTTCCTTAAGTGAAGCAAGAACC
GAAGCCCGCCGCGCGGCGGCCGATAAAGGCGCCAATGGCATCATCATCAAACAATGCGTAATGATGGAAGAAGCAGCCCA
AGGCTGCGTCAGCCGCGCCCTCTGCGTTGGCCAAGCCATCAAAATGACCTCTGCCGACTAG

Upstream 100 bases:

>100_bases
ATCAAAAGTATCTTAAGCGCTAGAATTTGCTCAGATAAATCGCTCGATAACGCGCAGTCCGTTGGACTGCGCTTATTTAC
CCTTACTCTCAGGTCAAACC

Downstream 100 bases:

>100_bases
TTCAAAGCGTGTATACTGCACGCCAATATTGATGTACTTAGCAACCTAGACCATCGGCGTTTGGGTTGTTGTCCTTGCTT
TAGGTATTTTTTGCATGACA

Product: putative lipoprotein

Products: NA

Alternate protein names: Exopolysaccharide Synthesis Regulator RcsF

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MKIILSSALVLMLSACASDYSFNSNLDGEAINDYFKAGDVTLFEGDSLPKGHYELKGLVQGESCQADVNAVPASLSEART
EARRAAADKGANGIIIKQCVMMEEAAQGCVSRALCVGQAIKMTSAD

Sequences:

>Translated_126_residues
MKIILSSALVLMLSACASDYSFNSNLDGEAINDYFKAGDVTLFEGDSLPKGHYELKGLVQGESCQADVNAVPASLSEART
EARRAAADKGANGIIIKQCVMMEEAAQGCVSRALCVGQAIKMTSAD
>Mature_126_residues
MKIILSSALVLMLSACASDYSFNSNLDGEAINDYFKAGDVTLFEGDSLPKGHYELKGLVQGESCQADVNAVPASLSEART
EARRAAADKGANGIIIKQCVMMEEAAQGCVSRALCVGQAIKMTSAD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13238; Mature: 13238

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIILSSALVLMLSACASDYSFNSNLDGEAINDYFKAGDVTLFEGDSLPKGHYELKGLVQ
CCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCEEEECCCCCCCCCHHEEEEEC
GESCQADVNAVPASLSEARTEARRAAADKGANGIIIKQCVMMEEAAQGCVSRALCVGQAI
CCCCCCCCHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KMTSAD
HCCCCC
>Mature Secondary Structure
MKIILSSALVLMLSACASDYSFNSNLDGEAINDYFKAGDVTLFEGDSLPKGHYELKGLVQ
CCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCEEEECCCCCCCCCHHEEEEEC
GESCQADVNAVPASLSEARTEARRAAADKGANGIIIKQCVMMEEAAQGCVSRALCVGQAI
CCCCCCCCHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KMTSAD
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA