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The map label for this gene is gfcC [H]

Identifier: 117919842

GI number: 117919842

Start: 1610032

End: 1610820

Strand: Reverse

Name: gfcC [H]

Synonym: Shewana3_1394

Alternate gene names: 117919842

Gene position: 1610820-1610032 (Counterclockwise)

Preceding gene: 117919843

Following gene: 117919841

Centisome position: 32.4

GC content: 41.83

Gene sequence:

>789_bases
ATGAGATCCTATATAACACCTGTGGCTTTACTGCTCAGTACCTTGTCTTTATCAACAGCCCAAGCAAATATCCAACTTTA
TGTCAGTATATCTTCGACTAAAGAGCCGCTGGTACAAATAACCTATCCCACGACAATCCGAGTTGGCCAAGCTGTACAAG
ATGGTTTAGCACAACTCCCCCTTTATAATCAGAGTGCTAAAAGCGAAGAAATACCGATTTACTGGTTAGGTGCAGCTCTA
CTGGACATTCACAATACAGCGGCACTGGAAACGACTCGTCAGCAAGTGTTACAAAAATTAGCCAATATGGGCCAGCAGGC
AGACAACAATAGTCAGTATATTGCTAAGCTCTCCAAGTTTGCACAATTTCTGCGTAATATAAAACTTGGACAAAGAGTTA
ATCAGCCATTAGATCTCGATTTAATTCGTATTACCGATGCCTACAATCCCATAATTGATGGTCAATTTTTATTAGTGTTG
CCTCCACGCCCAAGCACAGTGACAGTGGTTGGTGCAGTATCACAAACTGGTGAGCAAGCGTGGCAATCTCAAACAAGTAG
CAGAGAATATCTTCAACAGGCTGGTTTATTGGAAAATGCTGAAAATAGCTTTGTTTGGATTATCCAACCCGATGGTAACG
CTATTCGACAACCCATTGCCTATTGGAATCATCAGGCCCAGGATATAGCTCCAGGCGCCACACTCTTCGTTGAGTTTTCA
GGCCTTTTTGATGACTATTCCACATTAAACAACAACATCATTGAATTACTCAAAAATCGGGCTCTGTAA

Upstream 100 bases:

>100_bases
CAAAATGGTAACGTCCTTAAGAGTCGTCAAAAGATTGCACCTAATCTGCCATTTATTGACATCACATTACTAAAGCCTTT
TGCGGCATAGTGGAGCCATA

Downstream 100 bases:

>100_bases
TGAAAAACTCGACTCCCACTTTTCCCTCTTTCGGGCGTTTATCAGCGCTATCTTTAGCACTGCTACCATTATTACACGTT
AGCGCCGATGAATTTTCTTA

Product: hypothetical protein

Products: NA

Alternate protein names: Group 4 capsule protein C homolog [H]

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MRSYITPVALLLSTLSLSTAQANIQLYVSISSTKEPLVQITYPTTIRVGQAVQDGLAQLPLYNQSAKSEEIPIYWLGAAL
LDIHNTAALETTRQQVLQKLANMGQQADNNSQYIAKLSKFAQFLRNIKLGQRVNQPLDLDLIRITDAYNPIIDGQFLLVL
PPRPSTVTVVGAVSQTGEQAWQSQTSSREYLQQAGLLENAENSFVWIIQPDGNAIRQPIAYWNHQAQDIAPGATLFVEFS
GLFDDYSTLNNNIIELLKNRAL

Sequences:

>Translated_262_residues
MRSYITPVALLLSTLSLSTAQANIQLYVSISSTKEPLVQITYPTTIRVGQAVQDGLAQLPLYNQSAKSEEIPIYWLGAAL
LDIHNTAALETTRQQVLQKLANMGQQADNNSQYIAKLSKFAQFLRNIKLGQRVNQPLDLDLIRITDAYNPIIDGQFLLVL
PPRPSTVTVVGAVSQTGEQAWQSQTSSREYLQQAGLLENAENSFVWIIQPDGNAIRQPIAYWNHQAQDIAPGATLFVEFS
GLFDDYSTLNNNIIELLKNRAL
>Mature_262_residues
MRSYITPVALLLSTLSLSTAQANIQLYVSISSTKEPLVQITYPTTIRVGQAVQDGLAQLPLYNQSAKSEEIPIYWLGAAL
LDIHNTAALETTRQQVLQKLANMGQQADNNSQYIAKLSKFAQFLRNIKLGQRVNQPLDLDLIRITDAYNPIIDGQFLLVL
PPRPSTVTVVGAVSQTGEQAWQSQTSSREYLQQAGLLENAENSFVWIIQPDGNAIRQPIAYWNHQAQDIAPGATLFVEFS
GLFDDYSTLNNNIIELLKNRAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yjbG [H]

Homologues:

Organism=Escherichia coli, GI1787220, Length=190, Percent_Identity=32.6315789473684, Blast_Score=104, Evalue=6e-24,
Organism=Escherichia coli, GI1790460, Length=192, Percent_Identity=30.7291666666667, Blast_Score=96, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010425 [H]

Pfam domain/function: PF06251 DUF1017 [H]

EC number: NA

Molecular weight: Translated: 29086; Mature: 29086

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSYITPVALLLSTLSLSTAQANIQLYVSISSTKEPLVQITYPTTIRVGQAVQDGLAQLP
CCCHHHHHHHHHHHHHHCEEECEEEEEEEECCCCCCEEEEECCCEEEHHHHHHHHHHHCC
LYNQSAKSEEIPIYWLGAALLDIHNTAALETTRQQVLQKLANMGQQADNNSQYIAKLSKF
CCCCCCCCCCCCEEEHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
AQFLRNIKLGQRVNQPLDLDLIRITDAYNPIIDGQFLLVLPPRPSTVTVVGAVSQTGEQA
HHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCEEEEEECHHHHHHHH
WQSQTSSREYLQQAGLLENAENSFVWIIQPDGNAIRQPIAYWNHQAQDIAPGATLFVEFS
HHHHCHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCHHCCCCEEEEEEEC
GLFDDYSTLNNNIIELLKNRAL
CHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRSYITPVALLLSTLSLSTAQANIQLYVSISSTKEPLVQITYPTTIRVGQAVQDGLAQLP
CCCHHHHHHHHHHHHHHCEEECEEEEEEEECCCCCCEEEEECCCEEEHHHHHHHHHHHCC
LYNQSAKSEEIPIYWLGAALLDIHNTAALETTRQQVLQKLANMGQQADNNSQYIAKLSKF
CCCCCCCCCCCCEEEHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
AQFLRNIKLGQRVNQPLDLDLIRITDAYNPIIDGQFLLVLPPRPSTVTVVGAVSQTGEQA
HHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCEEEEEECHHHHHHHH
WQSQTSSREYLQQAGLLENAENSFVWIIQPDGNAIRQPIAYWNHQAQDIAPGATLFVEFS
HHHHCHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCHHCCCCEEEEEEEC
GLFDDYSTLNNNIIELLKNRAL
CHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]