Click here to switch to the map view.

The map label for this gene is acrR [C]

Identifier: 117919745

GI number: 117919745

Start: 1510970

End: 1511590

Strand: Direct

Name: acrR [C]

Synonym: Shewana3_1297

Alternate gene names: 117919745

Gene position: 1510970-1511590 (Clockwise)

Preceding gene: 117919742

Following gene: 117919746

Centisome position: 30.39

GC content: 49.76

Gene sequence:

>621_bases
ATGACTCAGTCCTCCGATATTCCGATGAGCCGCAGTGAACAAAAGAAACAGCAAGTGCTGGTGGCGGCCATTGACTTGTT
TTGCCGCCAGGGGTTTCCCCATACCAGCATGGATGAAGTGGCGAAACAGGCGGGCGTGTCCAAACAAACGGTGTACTCCC
ATTACGGCAGTAAAGATGATTTGTTTGTGGCGGCGATTGAATCCAAATGCGTTGGTCACAACCTAAATGCCGACTTACTC
AGCAATCCAAGTCAACCCGAAGCTACCCTCACCGAATTTGCGCTGCAATTTGGTGAGATGATTGTTAGCCCTGAGGCGAT
TACCGTATTTAAAGCCTGTGTGGCGCAATCTGAGAGCCACCCTGAAGTTTCAAGGTTGTTTTTTGAGGCGGGGCCACAGC
ATATGCTTGCGATGCTGACAAAATATTTAGGGGCGGTTGAAGCGCTTGGAGTGTATCGCTTTTCACAACCGCATCACTGC
GCGGTACGTTTGTGTTTAATGTTGTTTGGTGAGTTGAAACTCAGGTTAGAGCTGGGACTGGAGACGGAGAGCTTATTGGG
GGAGCGTGAGCAGTATATTCGGGGTTGTGCCGAGATGTTCTTAAAAGCCTACCGAGTGTAA

Upstream 100 bases:

>100_bases
GTAACTAGACTTGCTAGTCTAGTTGTGCGGAACTAGACTGTCTAGTCTATTTTATGCTTAACTAATACGAATTAATTATG
TTGCTACCTTGAGTGAAGAT

Downstream 100 bases:

>100_bases
CAACATTAAGCGGTTGGTATCAGTTTGTATCTTCTTCGAAAAGAGTTTACTTTTGTTTGAAATCGAGCGTATTATCCGCA
ACAAATGACTTAACAGTAAC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR; TetR-Family Transcriptional Regulator; Transcriptional Regulator Protein TetR Family; TetR-Type Transcriptional Regulator; Transcriptional Regulator Protein; TetR/AcrR Family Transcriptional Regulator; TetR-Like Virulence Regulator; TetR Family Transcriptional RegulatoR; Transcriptional Regulator Tetr Family; TetR Family Transcriptional Regulatory Protein; Transcription Regulator Protein; Transcriptional Regulator TetR/AcrR Family; Bacterial Regulatory Protein TetR Family Protein; Transcription Regulator Protein Tetr Family; TetR Family Regulatory Protein; Transcription Regulator Protein TetR Family; Transcriptional Regulator TetR; Transcriptional Regulator Protein Tetr Family

Number of amino acids: Translated: 206; Mature: 205

Protein sequence:

>206_residues
MTQSSDIPMSRSEQKKQQVLVAAIDLFCRQGFPHTSMDEVAKQAGVSKQTVYSHYGSKDDLFVAAIESKCVGHNLNADLL
SNPSQPEATLTEFALQFGEMIVSPEAITVFKACVAQSESHPEVSRLFFEAGPQHMLAMLTKYLGAVEALGVYRFSQPHHC
AVRLCLMLFGELKLRLELGLETESLLGEREQYIRGCAEMFLKAYRV

Sequences:

>Translated_206_residues
MTQSSDIPMSRSEQKKQQVLVAAIDLFCRQGFPHTSMDEVAKQAGVSKQTVYSHYGSKDDLFVAAIESKCVGHNLNADLL
SNPSQPEATLTEFALQFGEMIVSPEAITVFKACVAQSESHPEVSRLFFEAGPQHMLAMLTKYLGAVEALGVYRFSQPHHC
AVRLCLMLFGELKLRLELGLETESLLGEREQYIRGCAEMFLKAYRV
>Mature_205_residues
TQSSDIPMSRSEQKKQQVLVAAIDLFCRQGFPHTSMDEVAKQAGVSKQTVYSHYGSKDDLFVAAIESKCVGHNLNADLLS
NPSQPEATLTEFALQFGEMIVSPEAITVFKACVAQSESHPEVSRLFFEAGPQHMLAMLTKYLGAVEALGVYRFSQPHHCA
VRLCLMLFGELKLRLELGLETESLLGEREQYIRGCAEMFLKAYRV

Specific function: Potential Regulator Protein For The Acrab Genes. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22938; Mature: 22806

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQSSDIPMSRSEQKKQQVLVAAIDLFCRQGFPHTSMDEVAKQAGVSKQTVYSHYGSKDD
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHCCCCCC
LFVAAIESKCVGHNLNADLLSNPSQPEATLTEFALQFGEMIVSPEAITVFKACVAQSESH
EEEEEHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC
PEVSRLFFEAGPQHMLAMLTKYLGAVEALGVYRFSQPHHCAVRLCLMLFGELKLRLELGL
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC
ETESLLGEREQYIRGCAEMFLKAYRV
CHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TQSSDIPMSRSEQKKQQVLVAAIDLFCRQGFPHTSMDEVAKQAGVSKQTVYSHYGSKDD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHCCCCCC
LFVAAIESKCVGHNLNADLLSNPSQPEATLTEFALQFGEMIVSPEAITVFKACVAQSESH
EEEEEHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC
PEVSRLFFEAGPQHMLAMLTKYLGAVEALGVYRFSQPHHCAVRLCLMLFGELKLRLELGL
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC
ETESLLGEREQYIRGCAEMFLKAYRV
CHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA