Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

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The map label for this gene is 117919746

Identifier: 117919746

GI number: 117919746

Start: 1511704

End: 1512651

Strand: Direct

Name: 117919746

Synonym: Shewana3_1298

Alternate gene names: NA

Gene position: 1511704-1512651 (Clockwise)

Preceding gene: 117919745

Following gene: 117919750

Centisome position: 30.4

GC content: 50.11

Gene sequence:

>948_bases
GTGACTAAATCACTTGATTCTCGAGTCAGCATAAAGCCCAGCCTAATGTATATAGGATTGGGATTAACGCCTTTTTTAAG
TTATGCCGTGTCCGCGGCTGAGGCGCGTCAACCAGCGCAATATAAACCATTTAAGCTGAGCGTATCGCAGATTAGTACCC
AGAGTGCATCGGTTGCCAATGGCGATACAGAGTTGCAGCGGGACAGCTTATTACTCAACGCCAGCGTCAATATTCCCCTA
GATAAACAGTGGTCTATTGGAATGCGTGTCGGTTACGATAGGCTTGATTACGATTGGCGCAATATCCGTTTAACGGGGGC
GAATAACGCCGCTGGCCTGTTTAGTGATGCGGGTGAAACCTGGGAAAATATCGACCGTTATCGCGCGGGCCTATCCCTTA
GCTATCGGATGGATAAGCATTGGTCCTTTATGTTGTCGCCACAACTTCAATATGCCTATGCCGATACCGCATCGGCGAGC
CATGCGCAGAGTTATGGTGTGGTTGCGTCGGCCATGTATGCCTTCGAGTCGGGCAATATGCTCGGTTTTGGCGTTGCGTA
TTTAAACGATATTGATGAAGTACGCACTATGCCTTATCTGGCGGTGAGTTGGCAGATTAATGATCGTTGGCGGTTAGCGA
ACCCATCCCAAGCGGGATTTAGTGGCCCTGCGGGTTTGGAGCTGAGTTATCAAGTGAGCCCTGCATGGAATGTTGGCTTT
GGTAATTCACGTCGCACCGAGCGATTTTTAGTCGCCGATAAGGATACCGTGGTAGAGACTAACGAGTGGGTGAGTTATCT
GCGTGCCGGTTGGCAAGCTACGCCGGCTATTGCGCTGAATCTTTACGCGGGTTACTACTTCAATGGTGAATTGGAAGTCA
CCCATCAAGCGGCGCTCGATATGGATAACCAAGGCGCAGCCGCCTTGGATCTCGAGTTCCGATTTTAA

Upstream 100 bases:

>100_bases
TTGGTATCAGTTTGTATCTTCTTCGAAAAGAGTTTACTTTTGTTTGAAATCGAGCGTATTATCCGCAACAAATGACTTAA
CAGTAACGCAAGGAGCAGGC

Downstream 100 bases:

>100_bases
TTACTGGCCCAGCATGGCCTCTTTGAGGCTCTTCTGGGCTGGTTTTTCCCCTAGCCAAATTTTGAGTAAGGCTTGGCGGA
ACATTTCCCCTTCAATCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 315; Mature: 314

Protein sequence:

>315_residues
MTKSLDSRVSIKPSLMYIGLGLTPFLSYAVSAAEARQPAQYKPFKLSVSQISTQSASVANGDTELQRDSLLLNASVNIPL
DKQWSIGMRVGYDRLDYDWRNIRLTGANNAAGLFSDAGETWENIDRYRAGLSLSYRMDKHWSFMLSPQLQYAYADTASAS
HAQSYGVVASAMYAFESGNMLGFGVAYLNDIDEVRTMPYLAVSWQINDRWRLANPSQAGFSGPAGLELSYQVSPAWNVGF
GNSRRTERFLVADKDTVVETNEWVSYLRAGWQATPAIALNLYAGYYFNGELEVTHQAALDMDNQGAAALDLEFRF

Sequences:

>Translated_315_residues
MTKSLDSRVSIKPSLMYIGLGLTPFLSYAVSAAEARQPAQYKPFKLSVSQISTQSASVANGDTELQRDSLLLNASVNIPL
DKQWSIGMRVGYDRLDYDWRNIRLTGANNAAGLFSDAGETWENIDRYRAGLSLSYRMDKHWSFMLSPQLQYAYADTASAS
HAQSYGVVASAMYAFESGNMLGFGVAYLNDIDEVRTMPYLAVSWQINDRWRLANPSQAGFSGPAGLELSYQVSPAWNVGF
GNSRRTERFLVADKDTVVETNEWVSYLRAGWQATPAIALNLYAGYYFNGELEVTHQAALDMDNQGAAALDLEFRF
>Mature_314_residues
TKSLDSRVSIKPSLMYIGLGLTPFLSYAVSAAEARQPAQYKPFKLSVSQISTQSASVANGDTELQRDSLLLNASVNIPLD
KQWSIGMRVGYDRLDYDWRNIRLTGANNAAGLFSDAGETWENIDRYRAGLSLSYRMDKHWSFMLSPQLQYAYADTASASH
AQSYGVVASAMYAFESGNMLGFGVAYLNDIDEVRTMPYLAVSWQINDRWRLANPSQAGFSGPAGLELSYQVSPAWNVGFG
NSRRTERFLVADKDTVVETNEWVSYLRAGWQATPAIALNLYAGYYFNGELEVTHQAALDMDNQGAAALDLEFRF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35000; Mature: 34869

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKSLDSRVSIKPSLMYIGLGLTPFLSYAVSAAEARQPAQYKPFKLSVSQISTQSASVAN
CCCCCCCCEECCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHCCCCCCCCC
GDTELQRDSLLLNASVNIPLDKQWSIGMRVGYDRLDYDWRNIRLTGANNAAGLFSDAGET
CCCCCCCCEEEEEEEECCCCCCCCCCCEEECCCCCCCCEEEEEEECCCCCCCCCCCCCHH
WENIDRYRAGLSLSYRMDKHWSFMLSPQLQYAYADTASASHAQSYGVVASAMYAFESGNM
HHHHHHHHHCCEEEEEECCCEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCE
LGFGVAYLNDIDEVRTMPYLAVSWQINDRWRLANPSQAGFSGPAGLELSYQVSPAWNVGF
EEEHHHHHCCHHHHHCCCEEEEEEEECCCEEECCCCCCCCCCCCCCEEEEEECCCEECCC
GNSRRTERFLVADKDTVVETNEWVSYLRAGWQATPAIALNLYAGYYFNGELEVTHQAALD
CCCCCCEEEEEECCCCEEECHHHHHHHHCCCCCCCEEEEEEEEEEEECCEEEEEEHHHCC
MDNQGAAALDLEFRF
CCCCCCEEEEEEEEC
>Mature Secondary Structure 
TKSLDSRVSIKPSLMYIGLGLTPFLSYAVSAAEARQPAQYKPFKLSVSQISTQSASVAN
CCCCCCCEECCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHCCCCCCCCC
GDTELQRDSLLLNASVNIPLDKQWSIGMRVGYDRLDYDWRNIRLTGANNAAGLFSDAGET
CCCCCCCCEEEEEEEECCCCCCCCCCCEEECCCCCCCCEEEEEEECCCCCCCCCCCCCHH
WENIDRYRAGLSLSYRMDKHWSFMLSPQLQYAYADTASASHAQSYGVVASAMYAFESGNM
HHHHHHHHHCCEEEEEECCCEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCE
LGFGVAYLNDIDEVRTMPYLAVSWQINDRWRLANPSQAGFSGPAGLELSYQVSPAWNVGF
EEEHHHHHCCHHHHHCCCEEEEEEEECCCEEECCCCCCCCCCCCCCEEEEEECCCEECCC
GNSRRTERFLVADKDTVVETNEWVSYLRAGWQATPAIALNLYAGYYFNGELEVTHQAALD
CCCCCCEEEEEECCCCEEECHHHHHHHHCCCCCCCEEEEEEEEEEEECCEEEEEEHHHCC
MDNQGAAALDLEFRF
CCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA