| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117919740
Identifier: 117919740
GI number: 117919740
Start: 1503154
End: 1503399
Strand: Direct
Name: 117919740
Synonym: Shewana3_1292
Alternate gene names: NA
Gene position: 1503154-1503399 (Clockwise)
Preceding gene: 117919739
Following gene: 117919742
Centisome position: 30.23
GC content: 65.04
Gene sequence:
>246_bases ATGAGCACAACCAAGAAGCTGCGGCTGGGGCCGCTGCCCAAGACCGAAAGCGTCAAGCTCACCTTTGCCTGCCCGGCCAG TCTTAAAACCGACCTCGACCGCTACGCCGCGCTGCACGCGCAGGCGTATGGCGAGGCAGTCGATGCGGCGACGCTGATCC CGCACATGCTGGAAGCGTTCATGGCGGGGGATCGGGGATTCAGAAAAGGAGGGGCAGGCAAGGCCGCCCCGCCGAAGCCG AGTTGA
Upstream 100 bases:
>100_bases CCTTGACCCAACGGCCCGGCCTGCCGGTGCGGATCATCGTCAACCGCGACTTGGTGTTGCGGCCGTACCAGCCGCTGTTC TTCAATCGGGGGACTTCACG
Downstream 100 bases:
>100_bases CGATGCGGACGCCTCTACCATCCGCCCACGATGAAAGCGCAGCCCAAGGGCTGCGCTTTCGCTTTGAGCGGTGGCTTGCG ATAGGCCGGGCTATGATGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 81; Mature: 80
Protein sequence:
>81_residues MSTTKKLRLGPLPKTESVKLTFACPASLKTDLDRYAALHAQAYGEAVDAATLIPHMLEAFMAGDRGFRKGGAGKAAPPKP S
Sequences:
>Translated_81_residues MSTTKKLRLGPLPKTESVKLTFACPASLKTDLDRYAALHAQAYGEAVDAATLIPHMLEAFMAGDRGFRKGGAGKAAPPKP S >Mature_80_residues STTKKLRLGPLPKTESVKLTFACPASLKTDLDRYAALHAQAYGEAVDAATLIPHMLEAFMAGDRGFRKGGAGKAAPPKPS
Specific function: Unknown
COG id: COG5639
COG function: function code S; Uncharacterized conserved small protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8542; Mature: 8411
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTKKLRLGPLPKTESVKLTFACPASLKTDLDRYAALHAQAYGEAVDAATLIPHMLEAF CCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MAGDRGFRKGGAGKAAPPKPS HHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure STTKKLRLGPLPKTESVKLTFACPASLKTDLDRYAALHAQAYGEAVDAATLIPHMLEAF CCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MAGDRGFRKGGAGKAAPPKPS HHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA