| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is glcG [C]
Identifier: 117919724
GI number: 117919724
Start: 1487726
End: 1488133
Strand: Direct
Name: glcG [C]
Synonym: Shewana3_1276
Alternate gene names: 117919724
Gene position: 1487726-1488133 (Clockwise)
Preceding gene: 117919723
Following gene: 117919725
Centisome position: 29.92
GC content: 60.05
Gene sequence:
>408_bases ATGTCGCTATTCCTAAGCGAAGCCACTATCCAAAGTGTCATAGAACGTGCCCTGGTGATCGCACGCGAACAGGGTTTCGC CATCAACATCGCCGTCGTGAACGATGCTGGTCTGCTACAGGGCTTCCTGAGCATGGATGGCGCGGTTCCCGGTGCTATAG ACGTCTCCATCAAGAAAGCTCGTACAGCAGCGCTATTCCGTACCGACAGCCTAGAGCTTGGTGCGGCCGCCCAGCCGGGC GGGGCGATCTACACGCTGGAGGCAACCAATGGCGGCCTGATCAGCTTTGGCGGCGGCGTTGTGCTTCATGACGAGCTCGG CCGCACGATTGGTGCCGTCGGCGTGGCGGGGGCCACGGTCGAAGCAGATCAGATTATTGCCTTGCAAGCGGCGGGAAGGA GCTTATGA
Upstream 100 bases:
>100_bases CATAATCAAACTTTAGCCTCTGGTTAGTCTCAGCACCTTCCCGCGACGTGGATGCGAAGAAATAATAGAAGACTCTTTTA ACTTCCAAGGAGTTTTTGTT
Downstream 100 bases:
>100_bases AACAGACTCATCGTACCCATCCTGGTGTCTGGGCGCTGGCGGTCACGGCCTTCGCCATTGGCGTGGCCGAGTTCATCGTG GTCGGCATTCTGCCAGCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: ORFY [H]
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MSLFLSEATIQSVIERALVIAREQGFAINIAVVNDAGLLQGFLSMDGAVPGAIDVSIKKARTAALFRTDSLELGAAAQPG GAIYTLEATNGGLISFGGGVVLHDELGRTIGAVGVAGATVEADQIIALQAAGRSL
Sequences:
>Translated_135_residues MSLFLSEATIQSVIERALVIAREQGFAINIAVVNDAGLLQGFLSMDGAVPGAIDVSIKKARTAALFRTDSLELGAAAQPG GAIYTLEATNGGLISFGGGVVLHDELGRTIGAVGVAGATVEADQIIALQAAGRSL >Mature_134_residues SLFLSEATIQSVIERALVIAREQGFAINIAVVNDAGLLQGFLSMDGAVPGAIDVSIKKARTAALFRTDSLELGAAAQPGG AIYTLEATNGGLISFGGGVVLHDELGRTIGAVGVAGATVEADQIIALQAAGRSL
Specific function: Unknown
COG id: COG3193
COG function: function code R; Uncharacterized protein, possibly involved in utilization of glycolate and propanediol
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glcG family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005624 [H]
Pfam domain/function: PF03928 DUF336 [H]
EC number: NA
Molecular weight: Translated: 13622; Mature: 13491
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLFLSEATIQSVIERALVIAREQGFAINIAVVNDAGLLQGFLSMDGAVPGAIDVSIKKA CCEEECHHHHHHHHHHHHHEEECCCCEEEEEEECCCHHHHHHHHCCCCCCCEEEEEECCC RTAALFRTDSLELGAAAQPGGAIYTLEATNGGLISFGGGVVLHDELGRTIGAVGVAGATV CEEEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEECCCEEEEHHHCCHHCCCCCCCCEE EADQIIALQAAGRSL CCCEEEEEECCCCCC >Mature Secondary Structure SLFLSEATIQSVIERALVIAREQGFAINIAVVNDAGLLQGFLSMDGAVPGAIDVSIKKA CEEECHHHHHHHHHHHHHEEECCCCEEEEEEECCCHHHHHHHHCCCCCCCEEEEEECCC RTAALFRTDSLELGAAAQPGGAIYTLEATNGGLISFGGGVVLHDELGRTIGAVGVAGATV CEEEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEECCCEEEEHHHCCHHCCCCCCCCEE EADQIIALQAAGRSL CCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA