The gene/protein map for NC_008577 is currently unavailable.
Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

Click here to switch to the map view.

The map label for this gene is 117919714

Identifier: 117919714

GI number: 117919714

Start: 1479549

End: 1480082

Strand: Direct

Name: 117919714

Synonym: Shewana3_1266

Alternate gene names: NA

Gene position: 1479549-1480082 (Clockwise)

Preceding gene: 117919713

Following gene: 117919715

Centisome position: 29.76

GC content: 63.67

Gene sequence:

>534_bases
ATGAACACACAACCTTCGACGGCACCAGTTGCATCGCGACCGCCGCTCGCCTCGTTCCCCGGCCAGGCCGACAGCGCACC
GCTGACGCGCGTCTCGCTGGCCTATCTCGAATCCCGCTTCAAGCTTTACCTGCGCTTCGGTGAACCCGTACGCATCATTC
GATTCGATCGCTGGCGGCGCGTGGCGGTGTTCCTGCCAAACGCCATATTCTGCCGCATCCGCTGGCAGGCTAATGACTAC
GGCACTGTGCGTTGGCAACTCATGGTGATGCAGTCTGGTCTGCCGCGAGATGCCATGCAGCGTATCCCTGGTGTGAAGCC
CGGCGCGCGTCTTCTGCTGCACACGCAAGGCGACCACAGGGTGCGCACTATGCTGGAGCGCATCGACGCTATCGAGGCAC
AAGGTATTGCACCGGCAACGGTGCCGCCCGCGTATTGGCGTACGCTCGCCAATAGGCTTGCTGCGCGTTTGCCGTTGCCT
GAGTACACCGCCGAGCGGCATGCCGCCTGGCTGGCCGGGAGGGCGCTGCAATGA

Upstream 100 bases:

>100_bases
CCATGCGGGCGCGCATCAAGGTCTCAGCCTTCACGCAGGGCGTGACCGTGGCCGAGTTGCTGCGTGCCTTGCTGGAACGC
GAGTTCCCGGAGAACCCATC

Downstream 100 bases:

>100_bases
CCGCTGCTTCTACTGCTGGCCCCGCATCGCGTTCTCGCTCGCGCCTGAGCGTGCACATCTTACTGATAGTTCTTTCCGTC
TGCGGCTTGGCTGCATTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MNTQPSTAPVASRPPLASFPGQADSAPLTRVSLAYLESRFKLYLRFGEPVRIIRFDRWRRVAVFLPNAIFCRIRWQANDY
GTVRWQLMVMQSGLPRDAMQRIPGVKPGARLLLHTQGDHRVRTMLERIDAIEAQGIAPATVPPAYWRTLANRLAARLPLP
EYTAERHAAWLAGRALQ

Sequences:

>Translated_177_residues
MNTQPSTAPVASRPPLASFPGQADSAPLTRVSLAYLESRFKLYLRFGEPVRIIRFDRWRRVAVFLPNAIFCRIRWQANDY
GTVRWQLMVMQSGLPRDAMQRIPGVKPGARLLLHTQGDHRVRTMLERIDAIEAQGIAPATVPPAYWRTLANRLAARLPLP
EYTAERHAAWLAGRALQ
>Mature_177_residues
MNTQPSTAPVASRPPLASFPGQADSAPLTRVSLAYLESRFKLYLRFGEPVRIIRFDRWRRVAVFLPNAIFCRIRWQANDY
GTVRWQLMVMQSGLPRDAMQRIPGVKPGARLLLHTQGDHRVRTMLERIDAIEAQGIAPATVPPAYWRTLANRLAARLPLP
EYTAERHAAWLAGRALQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20082; Mature: 20082

Theoretical pI: Translated: 11.86; Mature: 11.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTQPSTAPVASRPPLASFPGQADSAPLTRVSLAYLESRFKLYLRFGEPVRIIRFDRWRR
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEEECCCEEEEEECCCEE
VAVFLPNAIFCRIRWQANDYGTVRWQLMVMQSGLPRDAMQRIPGVKPGARLLLHTQGDHR
EEEECCCEEEEEEEEECCCCCEEEEEEEEECCCCCHHHHHHCCCCCCCCEEEEECCCCHH
VRTMLERIDAIEAQGIAPATVPPAYWRTLANRLAARLPLPEYTAERHAAWLAGRALQ
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNTQPSTAPVASRPPLASFPGQADSAPLTRVSLAYLESRFKLYLRFGEPVRIIRFDRWRR
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEEECCCEEEEEECCCEE
VAVFLPNAIFCRIRWQANDYGTVRWQLMVMQSGLPRDAMQRIPGVKPGARLLLHTQGDHR
EEEECCCEEEEEEEEECCCCCEEEEEEEEECCCCCHHHHHHCCCCCCCCEEEEECCCCHH
VRTMLERIDAIEAQGIAPATVPPAYWRTLANRLAARLPLPEYTAERHAAWLAGRALQ
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA