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The map label for this gene is 117919706

Identifier: 117919706

GI number: 117919706

Start: 1474143

End: 1475105

Strand: Reverse

Name: 117919706

Synonym: Shewana3_1257

Alternate gene names: NA

Gene position: 1475105-1474143 (Counterclockwise)

Preceding gene: 117919707

Following gene: 117919705

Centisome position: 29.67

GC content: 51.19

Gene sequence:

>963_bases
ATGAGCGACGCCACCTCCTCCTCATCGCTCTCCAAGGAATACGCTAGCGACAACGTATGCCGTGTCCTTGCTCTTGATGG
CGGTGGCGCAAAGGGCTTTTATACACTGGGCGTTCTCAAGGAAATTGAGGCCATGCTTGGATGCCCACTATACAAGCGGT
TCGACCTTGTGTTCGGCACGAGCACTGGGGCGATCATTGCTGCACTCATCGCTCTAGGATATGAAGTAGACCAGATACAC
GCCCTCTACACCGCGCATGTGCCGCGGGTTATGTCCAGCCGATCAGCTTCAGAAAGAACAGCAGCACTTCAAGATTTGGC
GAAGGAAGTATTTACAGACAAGACTTTTGAAGATGTCAAGACGGGTATCGGTATCGTCGCTACCCGTTGGATGACCGAGC
GTCCCATGATCTTCAAGGGTAGCGTTGCGCAGGCACATGGCCGCAAGGGAACCTTCAGTCCTGGATTCGGAGTCAGCATT
GCTGACGCAGTGCAAGCGTCTTGTTCGGCCTATCCATTTTTCAATAGGAAGACGGTCGTCACTGCAGCCGGCGACAAGAT
CGAATTGATCGATGGAGGCTATTGCGCAAACAATCCCACCCTTTTTGCAGTAGCAGACGCGACTGTCGCCTTAGAAATGG
AACGCAAAGATATTCGGGTCGTGAACGTCGGCGTCGGTACTTACCCTGAACCAAAGCCGGGATTACTGATGCGGATAGCC
AAAAAATGGCTTGCCGTCCAGTTGCTTCAGAAGACGCTTGAGATTAACACTCAATCAATGGATCAGTTGCGCAACATTCT
ATTCAATGACATTCCAACAATTCGTATCAGCGATACCTTTGAGCGCCCAGAAATGGCGACAGACTTGCTTGAGCACGACC
TTGATAAATTGAATCTCCTTCGACAGCGCGGCAGTGAATCGTTCGCAGCGCATGAGGCACAGCTAAAGGAGTTTTTGATA
TGA

Upstream 100 bases:

>100_bases
TACTAACGCTGGCTTATACAGAGAACGACCAGCACAAAACTAGCCAGTTGCTGGATCAAGTCCAGCGTGAATTGGATGCG
ATCGTTGAGGGTAAAAAGGA

Downstream 100 bases:

>100_bases
GGGAGGCAGAGCATGGGAATACCTGAGTCACAGCTCGAAGTCTGGTCCCACCAAGGATCTATCAAGCAGTCAGCTGCAAC
CTACCATAGCATCAAAGATG

Product: patatin

Products: NA

Alternate protein names: Patatin-Like Phospholipase; Patatin-Related Protein; Phospholipase Patatin Family

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MSDATSSSSLSKEYASDNVCRVLALDGGGAKGFYTLGVLKEIEAMLGCPLYKRFDLVFGTSTGAIIAALIALGYEVDQIH
ALYTAHVPRVMSSRSASERTAALQDLAKEVFTDKTFEDVKTGIGIVATRWMTERPMIFKGSVAQAHGRKGTFSPGFGVSI
ADAVQASCSAYPFFNRKTVVTAAGDKIELIDGGYCANNPTLFAVADATVALEMERKDIRVVNVGVGTYPEPKPGLLMRIA
KKWLAVQLLQKTLEINTQSMDQLRNILFNDIPTIRISDTFERPEMATDLLEHDLDKLNLLRQRGSESFAAHEAQLKEFLI

Sequences:

>Translated_320_residues
MSDATSSSSLSKEYASDNVCRVLALDGGGAKGFYTLGVLKEIEAMLGCPLYKRFDLVFGTSTGAIIAALIALGYEVDQIH
ALYTAHVPRVMSSRSASERTAALQDLAKEVFTDKTFEDVKTGIGIVATRWMTERPMIFKGSVAQAHGRKGTFSPGFGVSI
ADAVQASCSAYPFFNRKTVVTAAGDKIELIDGGYCANNPTLFAVADATVALEMERKDIRVVNVGVGTYPEPKPGLLMRIA
KKWLAVQLLQKTLEINTQSMDQLRNILFNDIPTIRISDTFERPEMATDLLEHDLDKLNLLRQRGSESFAAHEAQLKEFLI
>Mature_319_residues
SDATSSSSLSKEYASDNVCRVLALDGGGAKGFYTLGVLKEIEAMLGCPLYKRFDLVFGTSTGAIIAALIALGYEVDQIHA
LYTAHVPRVMSSRSASERTAALQDLAKEVFTDKTFEDVKTGIGIVATRWMTERPMIFKGSVAQAHGRKGTFSPGFGVSIA
DAVQASCSAYPFFNRKTVVTAAGDKIELIDGGYCANNPTLFAVADATVALEMERKDIRVVNVGVGTYPEPKPGLLMRIAK
KWLAVQLLQKTLEINTQSMDQLRNILFNDIPTIRISDTFERPEMATDLLEHDLDKLNLLRQRGSESFAAHEAQLKEFLI

Specific function: Unknown

COG id: COG3621

COG function: function code R; Patatin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34967; Mature: 34835

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDATSSSSLSKEYASDNVCRVLALDGGGAKGFYTLGVLKEIEAMLGCPLYKRFDLVFGT
CCCCCCCHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHEEEEEEC
STGAIIAALIALGYEVDQIHALYTAHVPRVMSSRSASERTAALQDLAKEVFTDKTFEDVK
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHH
TGIGIVATRWMTERPMIFKGSVAQAHGRKGTFSPGFGVSIADAVQASCSAYPFFNRKTVV
HCCHHEEEHHHCCCCEEEECCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEE
TAAGDKIELIDGGYCANNPTLFAVADATVALEMERKDIRVVNVGVGTYPEPKPGLLMRIA
EECCCEEEEEECCEECCCCEEEEEECCEEEEEEECCCEEEEEECCCCCCCCCCHHHHHHH
KKWLAVQLLQKTLEINTQSMDQLRNILFNDIPTIRISDTFERPEMATDLLEHDLDKLNLL
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHH
RQRGSESFAAHEAQLKEFLI
HHCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
SDATSSSSLSKEYASDNVCRVLALDGGGAKGFYTLGVLKEIEAMLGCPLYKRFDLVFGT
CCCCCCHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHEEEEEEC
STGAIIAALIALGYEVDQIHALYTAHVPRVMSSRSASERTAALQDLAKEVFTDKTFEDVK
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHH
TGIGIVATRWMTERPMIFKGSVAQAHGRKGTFSPGFGVSIADAVQASCSAYPFFNRKTVV
HCCHHEEEHHHCCCCEEEECCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEE
TAAGDKIELIDGGYCANNPTLFAVADATVALEMERKDIRVVNVGVGTYPEPKPGLLMRIA
EECCCEEEEEECCEECCCCEEEEEECCEEEEEEECCCEEEEEECCCCCCCCCCHHHHHHH
KKWLAVQLLQKTLEINTQSMDQLRNILFNDIPTIRISDTFERPEMATDLLEHDLDKLNLL
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHH
RQRGSESFAAHEAQLKEFLI
HHCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA