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The map label for this gene is 117919707

Identifier: 117919707

GI number: 117919707

Start: 1475102

End: 1475392

Strand: Reverse

Name: 117919707

Synonym: Shewana3_1258

Alternate gene names: NA

Gene position: 1475392-1475102 (Counterclockwise)

Preceding gene: 117919717

Following gene: 117919706

Centisome position: 29.67

GC content: 54.3

Gene sequence:

>291_bases
GTGGCAGCAGAATACTCATTGGCGAGGGCGTTGAAAGCAGTCAGGAAAGCGCGTGGCTTGAGCCAAGAAGCGTTTTCCGA
CGTGTCGAGCCGCACCTACATGAGTACCTTGGAGCGCGACCTGAAAAGCCCGACCCTCAGCAAGCTGGCCGAGCTGTGCG
AGGTGATGGAGGTGCATCCGCTTACGTTACTAACGCTGGCTTATACAGAGAACGACCAGCACAAAACTAGCCAGTTGCTG
GATCAAGTCCAGCGTGAATTGGATGCGATCGTTGAGGGTAAAAAGGAATGA

Upstream 100 bases:

>100_bases
AAAAGCACGAAACGGGGGATTATCACCAAATGAACACTATAGATTGTAGCCCTATAGGACGCAATAGGTTGTCATCTTGG
TTTTTAAGAGGAAACCATAG

Downstream 100 bases:

>100_bases
GCGACGCCACCTCCTCCTCATCGCTCTCCAAGGAATACGCTAGCGACAACGTATGCCGTGTCCTTGCTCTTGATGGCGGT
GGCGCAAAGGGCTTTTATAC

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: Helix-Turn-Helix Domain-Containing Protein; Helix-Turn-Helix Domain Protein; Transcriptional Regulator; Transcriptional Regulator PbsX Family; Helix-Turn-Helix Domain-Containing

Number of amino acids: Translated: 96; Mature: 95

Protein sequence:

>96_residues
MAAEYSLARALKAVRKARGLSQEAFSDVSSRTYMSTLERDLKSPTLSKLAELCEVMEVHPLTLLTLAYTENDQHKTSQLL
DQVQRELDAIVEGKKE

Sequences:

>Translated_96_residues
MAAEYSLARALKAVRKARGLSQEAFSDVSSRTYMSTLERDLKSPTLSKLAELCEVMEVHPLTLLTLAYTENDQHKTSQLL
DQVQRELDAIVEGKKE
>Mature_95_residues
AAEYSLARALKAVRKARGLSQEAFSDVSSRTYMSTLERDLKSPTLSKLAELCEVMEVHPLTLLTLAYTENDQHKTSQLLD
QVQRELDAIVEGKKE

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10797; Mature: 10666

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAEYSLARALKAVRKARGLSQEAFSDVSSRTYMSTLERDLKSPTLSKLAELCEVMEVHP
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
LTLLTLAYTENDQHKTSQLLDQVQRELDAIVEGKKE
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AAEYSLARALKAVRKARGLSQEAFSDVSSRTYMSTLERDLKSPTLSKLAELCEVMEVHP
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
LTLLTLAYTENDQHKTSQLLDQVQRELDAIVEGKKE
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA