| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is rhlE [H]
Identifier: 117919262
GI number: 117919262
Start: 935224
End: 936960
Strand: Reverse
Name: rhlE [H]
Synonym: Shewana3_0810
Alternate gene names: 117919262
Gene position: 936960-935224 (Counterclockwise)
Preceding gene: 117919268
Following gene: 117919260
Centisome position: 18.84
GC content: 52.79
Gene sequence:
>1737_bases ATGAGTTTTTCCTCCCTAGGTTTATCTGCTCCAATCCAAAAAGCCGTGACTGAACAAGGTTATGACACACCCTCGCCCAT TCAAGCACAGGCGATTCCCGCCGTACTGACGGGTAAAGACGTGATGGCTGCGGCCCAAACGGGGACAGGAAAAACCGCAG GCTTTACCCTGCCGTTGCTCGAATTACTCTCTAAAGGCAATAAAGCGAAGGCAGGACAAATCCGCGCCCTAGTGCTCACC CCCACGCGTGAGTTAGCGGCTCAAGTAAGCGAAAGTGTTGAAACCTATGGTAAATATCTGCCATTACGCTCAGCGGTTGT CTTTGGTGGCGTGCCGATTAATCCCCAAATTCAAAAGCTACGCCATGGGGTAGATGTACTGGTCGCAACGCCAGGCCGAT TATTAGATCTAGAGCAGCAAAAGGCGGTGAAGTTTAATCAACTCGAAGTTTTAGTGCTGGATGAAGCGGATCGCATGCTC GACATGGGTTTTATTCGCGATATCAAAAAGATCCTCGCCATGTTGCCCGCTAAACGACAAAACCTGATGTTTTCGGCGAC CTTCTCCGATGAAATCCGCGAGCTCGCCAAAGGCCTAGTGAATCAACCAGTAGAAATTTCAGTTACGCCACGCAACGCCG CGGCAAACACGGTCAAGCAATGGATTTGCCCCGTCGATAAGAATCAAAAATCGGCGCTGCTTATTCAGCTCATCAAGCAG GAAGACTGGCAGCAGGTACTAGTGTTTTCACGCACTAAGCACGGTGCCAACAGACTGGCTAAGAGTCTTATTCAAGCCGA GATCAGCGCCGCCGCTATCCACGGCAACAAGAGCCAAGGCGCACGCACCAAAGCCTTAGCCGACTTTAAGAGTGGCGAAG TACGAGTACTCGTGGCGACCGACATTGCGGCGCGCGGGCTCGATATCGACCAATTACCACAAGTGGTGAACTTCGATCTG CCCAATGTGCCCGAAGATTACGTGCACCGCATTGGCCGCACCGGCCGTGCTGGCGCCTTAGGCCAAGCCGTATCCTTAGT CAGTAGCGAAGAAACTAAGCTGCTCAGGGATATTGAGCGTTTGATCAATCGCGTGCTCGAAAGGCAGGAAGTTGAAGGCT TCAGCCCTGTCCATACGCTTCCCGAATCGACCCTAAATGCCCATGGTAAAGAGAACAAAATCAAAGCCGTGGCGAGTCAA CGTAAGCACCGCAGCGCAGGTAAACCCGCGCCAAGAGCCGGTTCGGGCCGCGATGGTCGTAAAACACCGGCACCTAAAAC AGCTGACAATGGCGACTTAGCACAGCAAAAGGGCCAAAACGCGCAGCCAAACTCAAGTCAGCGTAACAATCAAGGCCAGC GCAGTCATCAAGGTCAACGCAACCAGCACCAAGAGCAACGCAATCACCAAGGCGAGTCTAAGCGTCCGCAAGCGGCAAAA AACGCTGAGCACAAGAATGCACCTGCGACAGCCGAACAGGCCCGCTCGCCAAAACCGCAGGATAAATATCCGCAACGTAG TAAAGGCCCTGCTAACTCAAGTAATAGCGAACATAAGGCCAATCGTGAGCATAAAGCCAAAGGCCAGTCTCATTCAGGCT CGCAGCAACGCAGTCAAGAGGCTCGCCATCACGAAGGGTCTAGCGAAAAGACAAACCAAGGGCTGCGTCGCCAAGGCAAG CCACAGGGACGAGTTCAACAGAGTACAAACTCCGCAGCTAATGCCCCGAAAAAGTAA
Upstream 100 bases:
>100_bases TTTCAAACATGGCGATCTAGCGCCTCTTCATGTAAGCTGCACGCCCGCCAATTCGGCCATACTACTGCTGCGACCCTTTG CTGCCACAAGAGACCCATTA
Downstream 100 bases:
>100_bases TCCTATCGCCCAGATAATCGCGGTAATGGTGTGAAGTAAGCAAGTTGCCACACTTATCACCACATTAAATATGATGGCAA AACCGTGGTTTTAAGCAATG
Product: DEAD/DEAH box helicase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 578; Mature: 577
Protein sequence:
>578_residues MSFSSLGLSAPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLELLSKGNKAKAGQIRALVLT PTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQKLRHGVDVLVATPGRLLDLEQQKAVKFNQLEVLVLDEADRML DMGFIRDIKKILAMLPAKRQNLMFSATFSDEIRELAKGLVNQPVEISVTPRNAAANTVKQWICPVDKNQKSALLIQLIKQ EDWQQVLVFSRTKHGANRLAKSLIQAEISAAAIHGNKSQGARTKALADFKSGEVRVLVATDIAARGLDIDQLPQVVNFDL PNVPEDYVHRIGRTGRAGALGQAVSLVSSEETKLLRDIERLINRVLERQEVEGFSPVHTLPESTLNAHGKENKIKAVASQ RKHRSAGKPAPRAGSGRDGRKTPAPKTADNGDLAQQKGQNAQPNSSQRNNQGQRSHQGQRNQHQEQRNHQGESKRPQAAK NAEHKNAPATAEQARSPKPQDKYPQRSKGPANSSNSEHKANREHKAKGQSHSGSQQRSQEARHHEGSSEKTNQGLRRQGK PQGRVQQSTNSAANAPKK
Sequences:
>Translated_578_residues MSFSSLGLSAPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLELLSKGNKAKAGQIRALVLT PTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQKLRHGVDVLVATPGRLLDLEQQKAVKFNQLEVLVLDEADRML DMGFIRDIKKILAMLPAKRQNLMFSATFSDEIRELAKGLVNQPVEISVTPRNAAANTVKQWICPVDKNQKSALLIQLIKQ EDWQQVLVFSRTKHGANRLAKSLIQAEISAAAIHGNKSQGARTKALADFKSGEVRVLVATDIAARGLDIDQLPQVVNFDL PNVPEDYVHRIGRTGRAGALGQAVSLVSSEETKLLRDIERLINRVLERQEVEGFSPVHTLPESTLNAHGKENKIKAVASQ RKHRSAGKPAPRAGSGRDGRKTPAPKTADNGDLAQQKGQNAQPNSSQRNNQGQRSHQGQRNQHQEQRNHQGESKRPQAAK NAEHKNAPATAEQARSPKPQDKYPQRSKGPANSSNSEHKANREHKAKGQSHSGSQQRSQEARHHEGSSEKTNQGLRRQGK PQGRVQQSTNSAANAPKK >Mature_577_residues SFSSLGLSAPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLELLSKGNKAKAGQIRALVLTP TRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQKLRHGVDVLVATPGRLLDLEQQKAVKFNQLEVLVLDEADRMLD MGFIRDIKKILAMLPAKRQNLMFSATFSDEIRELAKGLVNQPVEISVTPRNAAANTVKQWICPVDKNQKSALLIQLIKQE DWQQVLVFSRTKHGANRLAKSLIQAEISAAAIHGNKSQGARTKALADFKSGEVRVLVATDIAARGLDIDQLPQVVNFDLP NVPEDYVHRIGRTGRAGALGQAVSLVSSEETKLLRDIERLINRVLERQEVEGFSPVHTLPESTLNAHGKENKIKAVASQR KHRSAGKPAPRAGSGRDGRKTPAPKTADNGDLAQQKGQNAQPNSSQRNNQGQRSHQGQRNQHQEQRNHQGESKRPQAAKN AEHKNAPATAEQARSPKPQDKYPQRSKGPANSSNSEHKANREHKAKGQSHSGSQQRSQEARHHEGSSEKTNQGLRRQGKP QGRVQQSTNSAANAPKK
Specific function: Acts as an ATP-dependent RNA helicase, able to unwind ds-RNA [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI224593278, Length=363, Percent_Identity=41.3223140495868, Blast_Score=279, Evalue=5e-75, Organism=Homo sapiens, GI216548263, Length=394, Percent_Identity=37.0558375634518, Blast_Score=269, Evalue=6e-72, Organism=Homo sapiens, GI13518015, Length=394, Percent_Identity=37.0558375634518, Blast_Score=269, Evalue=7e-72, Organism=Homo sapiens, GI262231852, Length=394, Percent_Identity=37.0558375634518, Blast_Score=268, Evalue=1e-71, Organism=Homo sapiens, GI301171467, Length=389, Percent_Identity=39.3316195372751, Blast_Score=268, Evalue=1e-71, Organism=Homo sapiens, GI87196351, Length=389, Percent_Identity=39.3316195372751, Blast_Score=267, Evalue=2e-71, Organism=Homo sapiens, GI262118318, Length=394, Percent_Identity=37.0558375634518, Blast_Score=267, Evalue=2e-71, Organism=Homo sapiens, GI301171475, Length=389, Percent_Identity=39.3316195372751, Blast_Score=267, Evalue=2e-71, Organism=Homo sapiens, GI21071032, Length=372, Percent_Identity=38.9784946236559, Blast_Score=265, Evalue=8e-71, Organism=Homo sapiens, GI51094101, Length=368, Percent_Identity=38.8586956521739, Blast_Score=265, Evalue=1e-70, Organism=Homo sapiens, GI164419743, Length=368, Percent_Identity=38.8586956521739, Blast_Score=265, Evalue=1e-70, Organism=Homo sapiens, GI31542656, Length=406, Percent_Identity=38.1773399014778, Blast_Score=263, Evalue=3e-70, Organism=Homo sapiens, GI169881239, Length=389, Percent_Identity=38.560411311054, Blast_Score=263, Evalue=4e-70, Organism=Homo sapiens, GI13514809, Length=389, Percent_Identity=38.560411311054, Blast_Score=263, Evalue=4e-70, Organism=Homo sapiens, GI222352149, Length=366, Percent_Identity=41.5300546448087, Blast_Score=262, Evalue=7e-70, Organism=Homo sapiens, GI41327773, Length=362, Percent_Identity=37.0165745856354, Blast_Score=262, Evalue=8e-70, Organism=Homo sapiens, GI148613856, Length=372, Percent_Identity=37.6344086021505, Blast_Score=260, Evalue=2e-69, Organism=Homo sapiens, GI38201710, Length=372, Percent_Identity=37.6344086021505, Blast_Score=260, Evalue=2e-69, Organism=Homo sapiens, GI4758138, Length=368, Percent_Identity=37.7717391304348, Blast_Score=257, Evalue=2e-68, Organism=Homo sapiens, GI20149629, Length=366, Percent_Identity=36.6120218579235, Blast_Score=256, Evalue=3e-68, Organism=Homo sapiens, GI41327771, Length=418, Percent_Identity=34.2105263157895, Blast_Score=253, Evalue=5e-67, Organism=Homo sapiens, GI55749865, Length=358, Percent_Identity=38.5474860335196, Blast_Score=251, Evalue=1e-66, Organism=Homo sapiens, GI7661920, Length=359, Percent_Identity=34.8189415041783, Blast_Score=249, Evalue=7e-66, Organism=Homo sapiens, GI45446747, Length=362, Percent_Identity=35.9116022099448, Blast_Score=244, Evalue=1e-64, Organism=Homo sapiens, GI45446743, Length=362, Percent_Identity=35.9116022099448, Blast_Score=244, Evalue=1e-64, Organism=Homo sapiens, GI188035877, Length=364, Percent_Identity=35.989010989011, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI164664518, Length=358, Percent_Identity=35.4748603351955, Blast_Score=236, Evalue=6e-62, Organism=Homo sapiens, GI4758112, Length=362, Percent_Identity=33.9779005524862, Blast_Score=226, Evalue=4e-59, Organism=Homo sapiens, GI18375623, Length=362, Percent_Identity=33.9779005524862, Blast_Score=226, Evalue=4e-59, Organism=Homo sapiens, GI21040371, Length=362, Percent_Identity=33.1491712707182, Blast_Score=223, Evalue=4e-58, Organism=Homo sapiens, GI38327634, Length=376, Percent_Identity=34.3085106382979, Blast_Score=222, Evalue=7e-58, Organism=Homo sapiens, GI41327776, Length=366, Percent_Identity=34.6994535519126, Blast_Score=222, Evalue=9e-58, Organism=Homo sapiens, GI4503529, Length=368, Percent_Identity=34.5108695652174, Blast_Score=210, Evalue=3e-54, Organism=Homo sapiens, GI83700235, Length=368, Percent_Identity=33.9673913043478, Blast_Score=206, Evalue=6e-53, Organism=Homo sapiens, GI41327779, Length=361, Percent_Identity=35.4570637119114, Blast_Score=204, Evalue=1e-52, Organism=Homo sapiens, GI50659095, Length=374, Percent_Identity=35.5614973262032, Blast_Score=203, Evalue=4e-52, Organism=Homo sapiens, GI13514831, Length=366, Percent_Identity=32.7868852459016, Blast_Score=200, Evalue=4e-51, Organism=Homo sapiens, GI38569505, Length=359, Percent_Identity=33.4261838440111, Blast_Score=199, Evalue=6e-51, Organism=Homo sapiens, GI38569503, Length=359, Percent_Identity=33.4261838440111, Blast_Score=196, Evalue=4e-50, Organism=Homo sapiens, GI13129006, Length=370, Percent_Identity=33.2432432432432, Blast_Score=190, Evalue=4e-48, Organism=Homo sapiens, GI17505907, Length=417, Percent_Identity=29.9760191846523, Blast_Score=189, Evalue=5e-48, Organism=Homo sapiens, GI6005743, Length=398, Percent_Identity=32.9145728643216, Blast_Score=184, Evalue=3e-46, Organism=Homo sapiens, GI256223453, Length=366, Percent_Identity=32.5136612021858, Blast_Score=183, Evalue=4e-46, Organism=Homo sapiens, GI8922886, Length=398, Percent_Identity=32.4120603015075, Blast_Score=180, Evalue=3e-45, Organism=Homo sapiens, GI9506931, Length=420, Percent_Identity=31.1904761904762, Blast_Score=179, Evalue=5e-45, Organism=Homo sapiens, GI62241022, Length=380, Percent_Identity=33.1578947368421, Blast_Score=176, Evalue=4e-44, Organism=Homo sapiens, GI164419732, Length=380, Percent_Identity=31.3157894736842, Blast_Score=168, Evalue=1e-41, Organism=Homo sapiens, GI62241024, Length=359, Percent_Identity=32.8690807799443, Blast_Score=166, Evalue=7e-41, Organism=Homo sapiens, GI4826686, Length=344, Percent_Identity=30.5232558139535, Blast_Score=164, Evalue=2e-40, Organism=Homo sapiens, GI154759257, Length=431, Percent_Identity=29.4663573085847, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI9966805, Length=353, Percent_Identity=31.4447592067989, Blast_Score=149, Evalue=8e-36, Organism=Homo sapiens, GI256773275, Length=391, Percent_Identity=32.2250639386189, Blast_Score=142, Evalue=8e-34, Organism=Homo sapiens, GI20336298, Length=359, Percent_Identity=28.6908077994429, Blast_Score=134, Evalue=2e-31, Organism=Escherichia coli, GI1787016, Length=378, Percent_Identity=66.9312169312169, Blast_Score=512, Evalue=1e-146, Organism=Escherichia coli, GI87082221, Length=360, Percent_Identity=42.2222222222222, Blast_Score=291, Evalue=8e-80, Organism=Escherichia coli, GI1790214, Length=365, Percent_Identity=39.7260273972603, Blast_Score=255, Evalue=7e-69, Organism=Escherichia coli, GI1788930, Length=364, Percent_Identity=40.6593406593407, Blast_Score=253, Evalue=2e-68, Organism=Escherichia coli, GI1787605, Length=381, Percent_Identity=40.4199475065617, Blast_Score=244, Evalue=1e-65, Organism=Escherichia coli, GI48994977, Length=352, Percent_Identity=24.4318181818182, Blast_Score=65, Evalue=2e-11, Organism=Caenorhabditis elegans, GI32565321, Length=415, Percent_Identity=35.421686746988, Blast_Score=263, Evalue=1e-70, Organism=Caenorhabditis elegans, GI17510307, Length=386, Percent_Identity=39.119170984456, Blast_Score=263, Evalue=2e-70, Organism=Caenorhabditis elegans, GI17510309, Length=386, Percent_Identity=39.119170984456, Blast_Score=263, Evalue=2e-70, Organism=Caenorhabditis elegans, GI71995514, Length=386, Percent_Identity=39.119170984456, Blast_Score=263, Evalue=3e-70, Organism=Caenorhabditis elegans, GI71995718, Length=379, Percent_Identity=39.8416886543536, Blast_Score=258, Evalue=7e-69, Organism=Caenorhabditis elegans, GI17510559, Length=386, Percent_Identity=37.8238341968912, Blast_Score=257, Evalue=1e-68, Organism=Caenorhabditis elegans, GI71995724, Length=359, Percent_Identity=36.2116991643454, Blast_Score=253, Evalue=2e-67, Organism=Caenorhabditis elegans, GI17555296, Length=385, Percent_Identity=38.1818181818182, Blast_Score=253, Evalue=3e-67, Organism=Caenorhabditis elegans, GI17507121, Length=359, Percent_Identity=35.933147632312, Blast_Score=253, Evalue=3e-67, Organism=Caenorhabditis elegans, GI115533224, Length=348, Percent_Identity=39.367816091954, Blast_Score=249, Evalue=2e-66, Organism=Caenorhabditis elegans, GI86570094, Length=405, Percent_Identity=35.5555555555556, Blast_Score=249, Evalue=3e-66, Organism=Caenorhabditis elegans, GI17507945, Length=357, Percent_Identity=38.375350140056, Blast_Score=239, Evalue=2e-63, Organism=Caenorhabditis elegans, GI17552114, Length=360, Percent_Identity=34.7222222222222, Blast_Score=237, Evalue=1e-62, Organism=Caenorhabditis elegans, GI17507877, Length=380, Percent_Identity=36.5789473684211, Blast_Score=236, Evalue=4e-62, Organism=Caenorhabditis elegans, GI71999644, Length=507, Percent_Identity=30.3747534516765, Blast_Score=234, Evalue=9e-62, Organism=Caenorhabditis elegans, GI71999646, Length=507, Percent_Identity=30.3747534516765, Blast_Score=232, Evalue=3e-61, Organism=Caenorhabditis elegans, GI17507879, Length=384, Percent_Identity=35.15625, Blast_Score=232, Evalue=5e-61, Organism=Caenorhabditis elegans, GI71987143, Length=359, Percent_Identity=33.7047353760446, Blast_Score=230, Evalue=1e-60, Organism=Caenorhabditis elegans, GI115532548, Length=389, Percent_Identity=34.7043701799486, Blast_Score=224, Evalue=1e-58, Organism=Caenorhabditis elegans, GI17552642, Length=359, Percent_Identity=36.7688022284123, Blast_Score=224, Evalue=1e-58, Organism=Caenorhabditis elegans, GI17507881, Length=385, Percent_Identity=35.5844155844156, Blast_Score=220, Evalue=1e-57, Organism=Caenorhabditis elegans, GI115532546, Length=382, Percent_Identity=34.5549738219895, Blast_Score=220, Evalue=2e-57, Organism=Caenorhabditis elegans, GI17537549, Length=381, Percent_Identity=34.1207349081365, Blast_Score=219, Evalue=3e-57, Organism=Caenorhabditis elegans, GI17509811, Length=366, Percent_Identity=33.3333333333333, Blast_Score=213, Evalue=2e-55, Organism=Caenorhabditis elegans, GI71982858, Length=352, Percent_Identity=32.9545454545455, Blast_Score=213, Evalue=2e-55, Organism=Caenorhabditis elegans, GI17505370, Length=373, Percent_Identity=36.1930294906166, Blast_Score=206, Evalue=3e-53, Organism=Caenorhabditis elegans, GI193208216, Length=408, Percent_Identity=32.5980392156863, Blast_Score=190, Evalue=1e-48, Organism=Caenorhabditis elegans, GI71990816, Length=368, Percent_Identity=31.7934782608696, Blast_Score=182, Evalue=5e-46, Organism=Caenorhabditis elegans, GI17508543, Length=379, Percent_Identity=32.1899736147757, Blast_Score=181, Evalue=9e-46, Organism=Caenorhabditis elegans, GI17556951, Length=348, Percent_Identity=31.0344827586207, Blast_Score=177, Evalue=2e-44, Organism=Caenorhabditis elegans, GI193206561, Length=389, Percent_Identity=31.1053984575836, Blast_Score=171, Evalue=8e-43, Organism=Caenorhabditis elegans, GI17553716, Length=355, Percent_Identity=28.169014084507, Blast_Score=152, Evalue=3e-37, Organism=Caenorhabditis elegans, GI17536103, Length=386, Percent_Identity=29.2746113989637, Blast_Score=152, Evalue=6e-37, Organism=Caenorhabditis elegans, GI17536101, Length=380, Percent_Identity=29.7368421052632, Blast_Score=150, Evalue=2e-36, Organism=Caenorhabditis elegans, GI17536099, Length=380, Percent_Identity=29.7368421052632, Blast_Score=150, Evalue=2e-36, Organism=Caenorhabditis elegans, GI25148203, Length=418, Percent_Identity=25.8373205741627, Blast_Score=147, Evalue=1e-35, Organism=Caenorhabditis elegans, GI17507641, Length=383, Percent_Identity=30.2872062663185, Blast_Score=141, Evalue=8e-34, Organism=Caenorhabditis elegans, GI25148291, Length=332, Percent_Identity=28.9156626506024, Blast_Score=139, Evalue=3e-33, Organism=Caenorhabditis elegans, GI71982862, Length=225, Percent_Identity=34.2222222222222, Blast_Score=133, Evalue=2e-31, Organism=Caenorhabditis elegans, GI32564046, Length=374, Percent_Identity=30.4812834224599, Blast_Score=133, Evalue=3e-31, Organism=Caenorhabditis elegans, GI71997889, Length=408, Percent_Identity=26.9607843137255, Blast_Score=116, Evalue=4e-26, Organism=Caenorhabditis elegans, GI25148205, Length=342, Percent_Identity=24.5614035087719, Blast_Score=105, Evalue=5e-23, Organism=Caenorhabditis elegans, GI71987152, Length=97, Percent_Identity=40.2061855670103, Blast_Score=91, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6325138, Length=389, Percent_Identity=40.6169665809769, Blast_Score=282, Evalue=9e-77, Organism=Saccharomyces cerevisiae, GI6321360, Length=371, Percent_Identity=42.3180592991914, Blast_Score=270, Evalue=4e-73, Organism=Saccharomyces cerevisiae, GI6321856, Length=437, Percent_Identity=36.6132723112128, Blast_Score=270, Evalue=4e-73, Organism=Saccharomyces cerevisiae, GI6324778, Length=387, Percent_Identity=37.984496124031, Blast_Score=269, Evalue=7e-73, Organism=Saccharomyces cerevisiae, GI6320224, Length=364, Percent_Identity=36.2637362637363, Blast_Score=263, Evalue=6e-71, Organism=Saccharomyces cerevisiae, GI6324217, Length=363, Percent_Identity=38.2920110192837, Blast_Score=257, Evalue=3e-69, Organism=Saccharomyces cerevisiae, GI6323021, Length=368, Percent_Identity=39.6739130434783, Blast_Score=257, Evalue=4e-69, Organism=Saccharomyces cerevisiae, GI6320041, Length=359, Percent_Identity=36.7688022284123, Blast_Score=251, Evalue=3e-67, Organism=Saccharomyces cerevisiae, GI6323947, Length=363, Percent_Identity=34.9862258953168, Blast_Score=233, Evalue=7e-62, Organism=Saccharomyces cerevisiae, GI6320119, Length=382, Percent_Identity=33.5078534031414, Blast_Score=221, Evalue=2e-58, Organism=Saccharomyces cerevisiae, GI6320173, Length=421, Percent_Identity=30.8788598574822, Blast_Score=221, Evalue=2e-58, Organism=Saccharomyces cerevisiae, GI6321963, Length=380, Percent_Identity=34.2105263157895, Blast_Score=206, Evalue=9e-54, Organism=Saccharomyces cerevisiae, GI6321111, Length=371, Percent_Identity=32.3450134770889, Blast_Score=205, Evalue=2e-53, Organism=Saccharomyces cerevisiae, GI6322427, Length=360, Percent_Identity=32.7777777777778, Blast_Score=204, Evalue=4e-53, Organism=Saccharomyces cerevisiae, GI6320449, Length=373, Percent_Identity=33.7801608579088, Blast_Score=198, Evalue=2e-51, Organism=Saccharomyces cerevisiae, GI6319714, Length=382, Percent_Identity=31.6753926701571, Blast_Score=197, Evalue=5e-51, Organism=Saccharomyces cerevisiae, GI6322912, Length=366, Percent_Identity=32.2404371584699, Blast_Score=192, Evalue=1e-49, Organism=Saccharomyces cerevisiae, GI6322323, Length=366, Percent_Identity=32.2404371584699, Blast_Score=192, Evalue=1e-49, Organism=Saccharomyces cerevisiae, GI6324620, Length=358, Percent_Identity=34.3575418994413, Blast_Score=187, Evalue=3e-48, Organism=Saccharomyces cerevisiae, GI6320400, Length=415, Percent_Identity=29.1566265060241, Blast_Score=172, Evalue=1e-43, Organism=Saccharomyces cerevisiae, GI6321267, Length=356, Percent_Identity=30.3370786516854, Blast_Score=166, Evalue=1e-41, Organism=Saccharomyces cerevisiae, GI6319618, Length=415, Percent_Identity=28.1927710843373, Blast_Score=160, Evalue=5e-40, Organism=Saccharomyces cerevisiae, GI6323306, Length=410, Percent_Identity=26.8292682926829, Blast_Score=147, Evalue=6e-36, Organism=Saccharomyces cerevisiae, GI6324366, Length=379, Percent_Identity=26.1213720316623, Blast_Score=120, Evalue=6e-28, Organism=Saccharomyces cerevisiae, GI6322876, Length=217, Percent_Identity=31.3364055299539, Blast_Score=97, Evalue=9e-21, Organism=Saccharomyces cerevisiae, GI6321374, Length=210, Percent_Identity=29.5238095238095, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI24584399, Length=356, Percent_Identity=40.4494382022472, Blast_Score=278, Evalue=6e-75, Organism=Drosophila melanogaster, GI24642151, Length=367, Percent_Identity=36.2397820163488, Blast_Score=275, Evalue=8e-74, Organism=Drosophila melanogaster, GI28575014, Length=408, Percent_Identity=37.5, Blast_Score=271, Evalue=1e-72, Organism=Drosophila melanogaster, GI17985987, Length=396, Percent_Identity=39.3939393939394, Blast_Score=267, Evalue=1e-71, Organism=Drosophila melanogaster, GI28574962, Length=385, Percent_Identity=36.8831168831169, Blast_Score=263, Evalue=3e-70, Organism=Drosophila melanogaster, GI24584994, Length=431, Percent_Identity=33.6426914153132, Blast_Score=261, Evalue=7e-70, Organism=Drosophila melanogaster, GI21356161, Length=385, Percent_Identity=37.6623376623377, Blast_Score=260, Evalue=2e-69, Organism=Drosophila melanogaster, GI24644479, Length=379, Percent_Identity=36.9393139841689, Blast_Score=258, Evalue=9e-69, Organism=Drosophila melanogaster, GI24644483, Length=379, Percent_Identity=36.9393139841689, Blast_Score=257, Evalue=2e-68, Organism=Drosophila melanogaster, GI281361218, Length=379, Percent_Identity=36.9393139841689, Blast_Score=257, Evalue=2e-68, Organism=Drosophila melanogaster, GI24644481, Length=379, Percent_Identity=36.9393139841689, Blast_Score=257, Evalue=2e-68, Organism=Drosophila melanogaster, GI24644487, Length=379, Percent_Identity=36.9393139841689, Blast_Score=256, Evalue=2e-68, Organism=Drosophila melanogaster, GI45551833, Length=379, Percent_Identity=36.9393139841689, Blast_Score=256, Evalue=2e-68, Organism=Drosophila melanogaster, GI24644485, Length=379, Percent_Identity=36.9393139841689, Blast_Score=256, Evalue=2e-68, Organism=Drosophila melanogaster, GI18857967, Length=374, Percent_Identity=38.7700534759358, Blast_Score=256, Evalue=2e-68, Organism=Drosophila melanogaster, GI21355075, Length=353, Percent_Identity=39.3767705382436, Blast_Score=255, Evalue=6e-68, Organism=Drosophila melanogaster, GI24662330, Length=365, Percent_Identity=38.3561643835616, Blast_Score=254, Evalue=8e-68, Organism=Drosophila melanogaster, GI24585582, Length=373, Percent_Identity=36.4611260053619, Blast_Score=254, Evalue=1e-67, Organism=Drosophila melanogaster, GI17977678, Length=388, Percent_Identity=35.5670103092784, Blast_Score=251, Evalue=7e-67, Organism=Drosophila melanogaster, GI24645031, Length=359, Percent_Identity=33.983286908078, Blast_Score=241, Evalue=1e-63, Organism=Drosophila melanogaster, GI24583279, Length=358, Percent_Identity=35.195530726257, Blast_Score=235, Evalue=8e-62, Organism=Drosophila melanogaster, GI24583281, Length=358, Percent_Identity=35.195530726257, Blast_Score=234, Evalue=1e-61, Organism=Drosophila melanogaster, GI17136814, Length=368, Percent_Identity=39.6739130434783, Blast_Score=234, Evalue=2e-61, Organism=Drosophila melanogaster, GI24582080, Length=367, Percent_Identity=33.5149863760218, Blast_Score=216, Evalue=2e-56, Organism=Drosophila melanogaster, GI24582078, Length=367, Percent_Identity=33.5149863760218, Blast_Score=216, Evalue=2e-56, Organism=Drosophila melanogaster, GI17136248, Length=367, Percent_Identity=33.5149863760218, Blast_Score=216, Evalue=2e-56, Organism=Drosophila melanogaster, GI24582075, Length=367, Percent_Identity=33.5149863760218, Blast_Score=216, Evalue=2e-56, Organism=Drosophila melanogaster, GI28571808, Length=367, Percent_Identity=33.2425068119891, Blast_Score=213, Evalue=4e-55, Organism=Drosophila melanogaster, GI28571809, Length=367, Percent_Identity=33.2425068119891, Blast_Score=213, Evalue=4e-55, Organism=Drosophila melanogaster, GI281365720, Length=312, Percent_Identity=36.8589743589744, Blast_Score=212, Evalue=6e-55, Organism=Drosophila melanogaster, GI24581954, Length=362, Percent_Identity=33.1491712707182, Blast_Score=208, Evalue=7e-54, Organism=Drosophila melanogaster, GI24581952, Length=362, Percent_Identity=33.1491712707182, Blast_Score=208, Evalue=7e-54, Organism=Drosophila melanogaster, GI24581956, Length=362, Percent_Identity=33.1491712707182, Blast_Score=208, Evalue=7e-54, Organism=Drosophila melanogaster, GI20130173, Length=454, Percent_Identity=30.8370044052863, Blast_Score=191, Evalue=1e-48, Organism=Drosophila melanogaster, GI24642822, Length=400, Percent_Identity=30.75, Blast_Score=190, Evalue=2e-48, Organism=Drosophila melanogaster, GI21355559, Length=373, Percent_Identity=36.1930294906166, Blast_Score=190, Evalue=2e-48, Organism=Drosophila melanogaster, GI24666101, Length=365, Percent_Identity=33.6986301369863, Blast_Score=185, Evalue=8e-47, Organism=Drosophila melanogaster, GI17647335, Length=372, Percent_Identity=27.4193548387097, Blast_Score=167, Evalue=2e-41, Organism=Drosophila melanogaster, GI24643725, Length=403, Percent_Identity=29.0322580645161, Blast_Score=162, Evalue=7e-40, Organism=Drosophila melanogaster, GI19920478, Length=420, Percent_Identity=30.2380952380952, Blast_Score=149, Evalue=4e-36, Organism=Drosophila melanogaster, GI24668515, Length=327, Percent_Identity=29.3577981651376, Blast_Score=149, Evalue=5e-36, Organism=Drosophila melanogaster, GI17136666, Length=405, Percent_Identity=27.1604938271605, Blast_Score=138, Evalue=1e-32, Organism=Drosophila melanogaster, GI24640164, Length=351, Percent_Identity=30.1994301994302, Blast_Score=137, Evalue=3e-32, Organism=Drosophila melanogaster, GI28571338, Length=205, Percent_Identity=36.0975609756098, Blast_Score=127, Evalue=3e-29, Organism=Drosophila melanogaster, GI18859659, Length=205, Percent_Identity=36.0975609756098, Blast_Score=127, Evalue=3e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 62904; Mature: 62773
Theoretical pI: Translated: 10.85; Mature: 10.85
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFSSLGLSAPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLL CCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHCCHHHCCCHHHHHHCCCCCCCCCHHHHHH ELLSKGNKAKAGQIRALVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQKL HHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHEECCCCCCHHHHHH RHGVDVLVATPGRLLDLEQQKAVKFNQLEVLVLDEADRMLDMGFIRDIKKILAMLPAKRQ HCCCEEEEECCCHHCCCHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHH NLMFSATFSDEIRELAKGLVNQPVEISVTPRNAAANTVKQWICPVDKNQKSALLIQLIKQ CEEEEECHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHH EDWQQVLVFSRTKHGANRLAKSLIQAEISAAAIHGNKSQGARTKALADFKSGEVRVLVAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCEEEEEEE DIAARGLDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGALGQAVSLVSSEETKLLRDIER CHHHCCCCHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LINRVLERQEVEGFSPVHTLPESTLNAHGKENKIKAVASQRKHRSAGKPAPRAGSGRDGR HHHHHHHHHHCCCCCCHHHCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC KTPAPKTADNGDLAQQKGQNAQPNSSQRNNQGQRSHQGQRNQHQEQRNHQGESKRPQAAK CCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHCCCCCCCCCHHH NAEHKNAPATAEQARSPKPQDKYPQRSKGPANSSNSEHKANREHKAKGQSHSGSQQRSQE CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCHHHHHCCCCCCCHHHHHHH ARHHEGSSEKTNQGLRRQGKPQGRVQQSTNSAANAPKK HHHCCCCCHHHHHHHHHCCCCCCHHHHHCCCCCCCCCC >Mature Secondary Structure SFSSLGLSAPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLL CCCCCCCCHHHHHHHHHCCCCCCCCCCHHHCCHHHCCCHHHHHHCCCCCCCCCHHHHHH ELLSKGNKAKAGQIRALVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQKL HHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHEECCCCCCHHHHHH RHGVDVLVATPGRLLDLEQQKAVKFNQLEVLVLDEADRMLDMGFIRDIKKILAMLPAKRQ HCCCEEEEECCCHHCCCHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHH NLMFSATFSDEIRELAKGLVNQPVEISVTPRNAAANTVKQWICPVDKNQKSALLIQLIKQ CEEEEECHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHH EDWQQVLVFSRTKHGANRLAKSLIQAEISAAAIHGNKSQGARTKALADFKSGEVRVLVAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCEEEEEEE DIAARGLDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGALGQAVSLVSSEETKLLRDIER CHHHCCCCHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LINRVLERQEVEGFSPVHTLPESTLNAHGKENKIKAVASQRKHRSAGKPAPRAGSGRDGR HHHHHHHHHHCCCCCCHHHCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC KTPAPKTADNGDLAQQKGQNAQPNSSQRNNQGQRSHQGQRNQHQEQRNHQGESKRPQAAK CCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHCCCCCCCCCHHH NAEHKNAPATAEQARSPKPQDKYPQRSKGPANSSNSEHKANREHKAKGQSHSGSQQRSQE CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCHHHHHCCCCCCCHHHHHHH ARHHEGSSEKTNQGLRRQGKPQGRVQQSTNSAANAPKK HHHCCCCCHHHHHHHHHCCCCCCHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8037924; 8905232; 9278503; 1931833; 10361280 [H]