| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is lptB [H]
Identifier: 117919125
GI number: 117919125
Start: 793545
End: 794276
Strand: Reverse
Name: lptB [H]
Synonym: Shewana3_0673
Alternate gene names: 117919125
Gene position: 794276-793545 (Counterclockwise)
Preceding gene: 117919126
Following gene: 117919124
Centisome position: 15.97
GC content: 50.27
Gene sequence:
>732_bases ATGACCCAAATCACCTTAAAAGCACAAAATCTCGCTAAGAGTTATAAGAGTCGTCAGGTTGTGAAAGATGTCAGCCTGAC GGTGAAAACGGGTCAAGTCGTCGGCCTACTCGGCCCAAACGGCGCGGGTAAAACCACCACCTTTTACATGGTCGTGGGCT TAGTCAAAAGCGATAAAGGCCATATCTTTATCGACGATGATGATTTAACCGCCGATCCCATGCACCTGCGCGCCCGCAAA GGCATTGGTTACCTGCCACAGGAAGCCAGTATCTTTCGCAAGCTGACCGTGCACGACAATATCATGGCGGTACTGCAAAC CCGTAAAGAGCTCAATCGCGACCAACGCGAAGAAGAGCTGGAACATCTGCTCGAAGAGTTCCATATCACCCATATTCGCG ATAGCCAAGGCATGTCGTTATCGGGCGGTGAACGTCGCCGCGTCGAAATTGCCCGCGCCTTAGCGGCCAATCCTAAGTTT ATTCTGCTCGATGAACCCTTCGCCGGTGTCGACCCGATTTCGGTTATCGATATCAAGAAAATCATCGAACAACTTAAGAG TCGAGGCCTTGGGGTACTGATCACAGACCACAATGTGCGCGAAACCTTAGACGTCTGTGAACATGCCTACATTGTCAGTC ACGGAAACCTGATTGCCGAAGGAACTCCCGCAGAGATCTTAGACAATCAGCAAGTTAGGGCTGTGTACTTAGGTGAACAA TTCAGGCTATAG
Upstream 100 bases:
>100_bases GCGGTGATGATCGCGTGATTACTATTATTCAACCTGACAACTATCAGGAAGAGATCAAGAACCAGCCCGCGGACAAACCT GTGAAAAAACAGGACTCTAA
Downstream 100 bases:
>100_bases TTACTTAAACAGAGCCAATTAGCCTTGAATTTTGGCTTATCAGCGCCATCAATATGATAACAAGCGGCCTAAATTCAAAA TAATAACGTAGGGATCAGCG
Product: ABC transporter-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MTQITLKAQNLAKSYKSRQVVKDVSLTVKTGQVVGLLGPNGAGKTTTFYMVVGLVKSDKGHIFIDDDDLTADPMHLRARK GIGYLPQEASIFRKLTVHDNIMAVLQTRKELNRDQREEELEHLLEEFHITHIRDSQGMSLSGGERRRVEIARALAANPKF ILLDEPFAGVDPISVIDIKKIIEQLKSRGLGVLITDHNVRETLDVCEHAYIVSHGNLIAEGTPAEILDNQQVRAVYLGEQ FRL
Sequences:
>Translated_243_residues MTQITLKAQNLAKSYKSRQVVKDVSLTVKTGQVVGLLGPNGAGKTTTFYMVVGLVKSDKGHIFIDDDDLTADPMHLRARK GIGYLPQEASIFRKLTVHDNIMAVLQTRKELNRDQREEELEHLLEEFHITHIRDSQGMSLSGGERRRVEIARALAANPKF ILLDEPFAGVDPISVIDIKKIIEQLKSRGLGVLITDHNVRETLDVCEHAYIVSHGNLIAEGTPAEILDNQQVRAVYLGEQ FRL >Mature_242_residues TQITLKAQNLAKSYKSRQVVKDVSLTVKTGQVVGLLGPNGAGKTTTFYMVVGLVKSDKGHIFIDDDDLTADPMHLRARKG IGYLPQEASIFRKLTVHDNIMAVLQTRKELNRDQREEELEHLLEEFHITHIRDSQGMSLSGGERRRVEIARALAANPKFI LLDEPFAGVDPISVIDIKKIIEQLKSRGLGVLITDHNVRETLDVCEHAYIVSHGNLIAEGTPAEILDNQQVRAVYLGEQF RL
Specific function: Part of the ABC transporter complex LptBFG involved in the translocation of lipopolysaccharide (LPS) from the inner membrane to the outer membrane. Probably responsible for energy coupling to the transport system [H]
COG id: COG1137
COG function: function code R; ABC-type (unclassified) transport system, ATPase component
Gene ontology:
Cell location: Cytoplasm. Cell inner membrane; Peripheral membrane protein; Cytoplasmic side [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI45446740, Length=222, Percent_Identity=31.981981981982, Blast_Score=116, Evalue=2e-26, Organism=Homo sapiens, GI47078218, Length=222, Percent_Identity=31.981981981982, Blast_Score=116, Evalue=2e-26, Organism=Homo sapiens, GI153792144, Length=208, Percent_Identity=30.2884615384615, Blast_Score=108, Evalue=4e-24, Organism=Homo sapiens, GI105990541, Length=232, Percent_Identity=30.1724137931034, Blast_Score=107, Evalue=7e-24, Organism=Homo sapiens, GI116734710, Length=221, Percent_Identity=33.0316742081448, Blast_Score=106, Evalue=2e-23, Organism=Homo sapiens, GI11967969, Length=224, Percent_Identity=32.5892857142857, Blast_Score=103, Evalue=1e-22, Organism=Homo sapiens, GI31657092, Length=222, Percent_Identity=31.981981981982, Blast_Score=103, Evalue=1e-22, Organism=Homo sapiens, GI27881501, Length=214, Percent_Identity=30.3738317757009, Blast_Score=101, Evalue=6e-22, Organism=Homo sapiens, GI30795238, Length=214, Percent_Identity=30.3738317757009, Blast_Score=101, Evalue=7e-22, Organism=Homo sapiens, GI21536376, Length=233, Percent_Identity=31.7596566523605, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI27262624, Length=221, Percent_Identity=28.5067873303167, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI27262626, Length=221, Percent_Identity=28.5067873303167, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI150417984, Length=223, Percent_Identity=28.2511210762332, Blast_Score=96, Evalue=3e-20, Organism=Homo sapiens, GI255708477, Length=231, Percent_Identity=29.8701298701299, Blast_Score=95, Evalue=6e-20, Organism=Homo sapiens, GI27477115, Length=217, Percent_Identity=29.0322580645161, Blast_Score=94, Evalue=1e-19, Organism=Homo sapiens, GI46592964, Length=212, Percent_Identity=27.8301886792453, Blast_Score=91, Evalue=8e-19, Organism=Homo sapiens, GI46592956, Length=212, Percent_Identity=27.8301886792453, Blast_Score=91, Evalue=9e-19, Organism=Homo sapiens, GI46592915, Length=212, Percent_Identity=27.8301886792453, Blast_Score=91, Evalue=9e-19, Organism=Homo sapiens, GI46592898, Length=212, Percent_Identity=27.8301886792453, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI46592971, Length=212, Percent_Identity=27.8301886792453, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI46592978, Length=212, Percent_Identity=27.8301886792453, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI27436953, Length=208, Percent_Identity=28.3653846153846, Blast_Score=89, Evalue=4e-18, Organism=Homo sapiens, GI6005701, Length=208, Percent_Identity=28.8461538461538, Blast_Score=88, Evalue=5e-18, Organism=Homo sapiens, GI156105685, Length=227, Percent_Identity=29.5154185022026, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI171184400, Length=236, Percent_Identity=27.5423728813559, Blast_Score=85, Evalue=7e-17, Organism=Homo sapiens, GI215820660, Length=212, Percent_Identity=27.3584905660377, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI20143975, Length=212, Percent_Identity=27.3584905660377, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI4505771, Length=231, Percent_Identity=28.1385281385281, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI9961252, Length=231, Percent_Identity=28.1385281385281, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI9961250, Length=231, Percent_Identity=28.1385281385281, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI9955963, Length=172, Percent_Identity=32.5581395348837, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI11967971, Length=191, Percent_Identity=27.2251308900524, Blast_Score=79, Evalue=3e-15, Organism=Homo sapiens, GI42741659, Length=176, Percent_Identity=32.9545454545455, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI9955968, Length=230, Percent_Identity=27.8260869565217, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI9955966, Length=230, Percent_Identity=27.8260869565217, Blast_Score=75, Evalue=4e-14, Organism=Homo sapiens, GI45243524, Length=230, Percent_Identity=27.8260869565217, Blast_Score=75, Evalue=4e-14, Organism=Homo sapiens, GI90421313, Length=214, Percent_Identity=27.1028037383178, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI21536378, Length=225, Percent_Identity=27.5555555555556, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI89111135, Length=257, Percent_Identity=26.8482490272374, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI73747915, Length=211, Percent_Identity=26.0663507109005, Blast_Score=71, Evalue=7e-13, Organism=Homo sapiens, GI4557481, Length=162, Percent_Identity=30.2469135802469, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI148612844, Length=224, Percent_Identity=26.3392857142857, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI73747917, Length=181, Percent_Identity=27.0718232044199, Blast_Score=68, Evalue=6e-12, Organism=Homo sapiens, GI42490749, Length=165, Percent_Identity=27.8787878787879, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI157502203, Length=215, Percent_Identity=27.906976744186, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI157502201, Length=215, Percent_Identity=27.906976744186, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI25914749, Length=210, Percent_Identity=29.0476190476191, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI21729873, Length=210, Percent_Identity=26.6666666666667, Blast_Score=65, Evalue=8e-11, Organism=Homo sapiens, GI15149474, Length=210, Percent_Identity=26.6666666666667, Blast_Score=65, Evalue=8e-11, Organism=Escherichia coli, GI1789593, Length=239, Percent_Identity=74.4769874476987, Blast_Score=354, Evalue=3e-99, Organism=Escherichia coli, GI1788761, Length=247, Percent_Identity=34.0080971659919, Blast_Score=140, Evalue=7e-35, Organism=Escherichia coli, GI87082268, Length=239, Percent_Identity=32.6359832635983, Blast_Score=138, Evalue=3e-34, Organism=Escherichia coli, GI1789864, Length=254, Percent_Identity=29.9212598425197, Blast_Score=126, Evalue=1e-30, Organism=Escherichia coli, GI87081791, Length=235, Percent_Identity=31.9148936170213, Blast_Score=118, Evalue=3e-28, Organism=Escherichia coli, GI1788450, Length=220, Percent_Identity=29.5454545454545, Blast_Score=117, Evalue=6e-28, Organism=Escherichia coli, GI87081782, Length=224, Percent_Identity=31.6964285714286, Blast_Score=116, Evalue=1e-27, Organism=Escherichia coli, GI1790739, Length=239, Percent_Identity=28.4518828451883, Blast_Score=113, Evalue=1e-26, Organism=Escherichia coli, GI1786398, Length=231, Percent_Identity=30.3030303030303, Blast_Score=111, Evalue=4e-26, Organism=Escherichia coli, GI1786319, Length=216, Percent_Identity=31.9444444444444, Blast_Score=108, Evalue=4e-25, Organism=Escherichia coli, GI1789672, Length=236, Percent_Identity=29.6610169491525, Blast_Score=107, Evalue=1e-24, Organism=Escherichia coli, GI48994943, Length=243, Percent_Identity=28.8065843621399, Blast_Score=103, Evalue=7e-24, Organism=Escherichia coli, GI1790467, Length=226, Percent_Identity=28.3185840707965, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1786345, Length=236, Percent_Identity=29.2372881355932, Blast_Score=101, Evalue=4e-23, Organism=Escherichia coli, GI1788225, Length=246, Percent_Identity=29.2682926829268, Blast_Score=101, Evalue=4e-23, Organism=Escherichia coli, GI1786253, Length=215, Percent_Identity=29.7674418604651, Blast_Score=101, Evalue=4e-23, Organism=Escherichia coli, GI1788165, Length=219, Percent_Identity=31.9634703196347, Blast_Score=101, Evalue=4e-23, Organism=Escherichia coli, GI1790544, Length=256, Percent_Identity=30.078125, Blast_Score=101, Evalue=5e-23, Organism=Escherichia coli, GI87081709, Length=247, Percent_Identity=29.9595141700405, Blast_Score=100, Evalue=6e-23, Organism=Escherichia coli, GI1789586, Length=220, Percent_Identity=30.4545454545455, Blast_Score=100, Evalue=8e-23, Organism=Escherichia coli, GI1787029, Length=227, Percent_Identity=26.8722466960352, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1790162, Length=225, Percent_Identity=30.2222222222222, Blast_Score=99, Evalue=2e-22, Organism=Escherichia coli, GI1789032, Length=214, Percent_Identity=29.4392523364486, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1786803, Length=235, Percent_Identity=26.3829787234043, Blast_Score=98, Evalue=6e-22, Organism=Escherichia coli, GI1787370, Length=221, Percent_Identity=28.5067873303167, Blast_Score=98, Evalue=6e-22, Organism=Escherichia coli, GI1786563, Length=211, Percent_Identity=29.3838862559242, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1787089, Length=212, Percent_Identity=29.7169811320755, Blast_Score=95, Evalue=3e-21, Organism=Escherichia coli, GI1787792, Length=231, Percent_Identity=27.2727272727273, Blast_Score=95, Evalue=4e-21, Organism=Escherichia coli, GI87082267, Length=225, Percent_Identity=28, Blast_Score=95, Evalue=5e-21, Organism=Escherichia coli, GI1790190, Length=233, Percent_Identity=26.6094420600858, Blast_Score=94, Evalue=8e-21, Organism=Escherichia coli, GI1787112, Length=229, Percent_Identity=30.1310043668122, Blast_Score=92, Evalue=2e-20, Organism=Escherichia coli, GI1787712, Length=221, Percent_Identity=27.1493212669683, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI48995001, Length=222, Percent_Identity=27.4774774774775, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI1786872, Length=234, Percent_Identity=31.1965811965812, Blast_Score=91, Evalue=5e-20, Organism=Escherichia coli, GI1788472, Length=216, Percent_Identity=25.462962962963, Blast_Score=88, Evalue=4e-19, Organism=Escherichia coli, GI1788897, Length=218, Percent_Identity=28.4403669724771, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1788644, Length=244, Percent_Identity=28.2786885245902, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1790525, Length=229, Percent_Identity=27.5109170305677, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1788053, Length=169, Percent_Identity=31.3609467455621, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1787759, Length=249, Percent_Identity=26.5060240963855, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI87081834, Length=209, Percent_Identity=28.7081339712919, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1788506, Length=219, Percent_Identity=27.8538812785388, Blast_Score=85, Evalue=5e-18, Organism=Escherichia coli, GI1789991, Length=218, Percent_Identity=25.6880733944954, Blast_Score=83, Evalue=1e-17, Organism=Escherichia coli, GI1787105, Length=200, Percent_Identity=30, Blast_Score=82, Evalue=2e-17, Organism=Escherichia coli, GI1787547, Length=243, Percent_Identity=24.6913580246914, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1789891, Length=222, Percent_Identity=27.4774774774775, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1787500, Length=228, Percent_Identity=26.7543859649123, Blast_Score=78, Evalue=5e-16, Organism=Escherichia coli, GI1788210, Length=229, Percent_Identity=25.764192139738, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1788002, Length=256, Percent_Identity=28.515625, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1789873, Length=200, Percent_Identity=27, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI1786698, Length=198, Percent_Identity=25.2525252525253, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI48994997, Length=240, Percent_Identity=25.8333333333333, Blast_Score=72, Evalue=2e-14, Organism=Escherichia coli, GI1787143, Length=242, Percent_Identity=26.4462809917355, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI145693107, Length=238, Percent_Identity=26.4705882352941, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI48994883, Length=214, Percent_Identity=24.7663551401869, Blast_Score=71, Evalue=8e-14, Organism=Escherichia coli, GI2367384, Length=167, Percent_Identity=28.7425149700599, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1787164, Length=208, Percent_Identity=24.5192307692308, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1787758, Length=224, Percent_Identity=23.6607142857143, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1790534, Length=211, Percent_Identity=26.5402843601896, Blast_Score=65, Evalue=3e-12, Organism=Escherichia coli, GI1786653, Length=214, Percent_Identity=27.1028037383178, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI1787182, Length=224, Percent_Identity=24.5535714285714, Blast_Score=65, Evalue=6e-12, Organism=Escherichia coli, GI1786654, Length=238, Percent_Identity=23.9495798319328, Blast_Score=64, Evalue=6e-12, Organism=Escherichia coli, GI1786703, Length=161, Percent_Identity=29.1925465838509, Blast_Score=64, Evalue=7e-12, Organism=Caenorhabditis elegans, GI115533608, Length=218, Percent_Identity=34.8623853211009, Blast_Score=123, Evalue=9e-29, Organism=Caenorhabditis elegans, GI17510237, Length=218, Percent_Identity=32.1100917431193, Blast_Score=115, Evalue=3e-26, Organism=Caenorhabditis elegans, GI71983516, Length=216, Percent_Identity=31.9444444444444, Blast_Score=113, Evalue=8e-26, Organism=Caenorhabditis elegans, GI71983510, Length=216, Percent_Identity=31.9444444444444, Blast_Score=113, Evalue=8e-26, Organism=Caenorhabditis elegans, GI71983523, Length=216, Percent_Identity=31.9444444444444, Blast_Score=113, Evalue=9e-26, Organism=Caenorhabditis elegans, GI17565586, Length=236, Percent_Identity=28.8135593220339, Blast_Score=101, Evalue=4e-22, Organism=Caenorhabditis elegans, GI71992285, Length=259, Percent_Identity=28.5714285714286, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17541710, Length=236, Percent_Identity=27.9661016949153, Blast_Score=91, Evalue=5e-19, Organism=Caenorhabditis elegans, GI193211017, Length=236, Percent_Identity=30.0847457627119, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI193211015, Length=236, Percent_Identity=30.0847457627119, Blast_Score=85, Evalue=3e-17, Organism=Caenorhabditis elegans, GI71996809, Length=236, Percent_Identity=30.0847457627119, Blast_Score=85, Evalue=3e-17, Organism=Caenorhabditis elegans, GI193202349, Length=228, Percent_Identity=28.5087719298246, Blast_Score=85, Evalue=3e-17, Organism=Caenorhabditis elegans, GI25146777, Length=242, Percent_Identity=25.6198347107438, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI115534520, Length=235, Percent_Identity=25.9574468085106, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI86563255, Length=220, Percent_Identity=27.2727272727273, Blast_Score=80, Evalue=7e-16, Organism=Caenorhabditis elegans, GI17569145, Length=234, Percent_Identity=28.6324786324786, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17558664, Length=217, Percent_Identity=27.1889400921659, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI115533592, Length=229, Percent_Identity=25.764192139738, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17569143, Length=238, Percent_Identity=30.672268907563, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI71988343, Length=236, Percent_Identity=28.3898305084746, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17533971, Length=225, Percent_Identity=24.4444444444444, Blast_Score=76, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17569081, Length=248, Percent_Identity=25.8064516129032, Blast_Score=75, Evalue=2e-14, Organism=Caenorhabditis elegans, GI71984940, Length=225, Percent_Identity=29.7777777777778, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17552232, Length=232, Percent_Identity=27.5862068965517, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI193209708, Length=223, Percent_Identity=27.8026905829596, Blast_Score=74, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17565938, Length=221, Percent_Identity=25.3393665158371, Blast_Score=74, Evalue=6e-14, Organism=Caenorhabditis elegans, GI212646699, Length=243, Percent_Identity=23.8683127572016, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17567265, Length=232, Percent_Identity=28.448275862069, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17542146, Length=191, Percent_Identity=30.3664921465969, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17567269, Length=224, Percent_Identity=27.6785714285714, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17551700, Length=207, Percent_Identity=30.4347826086957, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI193208177, Length=235, Percent_Identity=25.531914893617, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI71996550, Length=242, Percent_Identity=24.3801652892562, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI115535101, Length=211, Percent_Identity=28.436018957346, Blast_Score=70, Evalue=9e-13, Organism=Caenorhabditis elegans, GI17543740, Length=222, Percent_Identity=23.4234234234234, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI71992290, Length=171, Percent_Identity=26.3157894736842, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI71992066, Length=224, Percent_Identity=24.5535714285714, Blast_Score=66, Evalue=1e-11, Organism=Caenorhabditis elegans, GI25146765, Length=224, Percent_Identity=24.5535714285714, Blast_Score=66, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71992070, Length=224, Percent_Identity=24.5535714285714, Blast_Score=66, Evalue=1e-11, Organism=Caenorhabditis elegans, GI86564969, Length=224, Percent_Identity=24.5535714285714, Blast_Score=66, Evalue=1e-11, Organism=Caenorhabditis elegans, GI115532730, Length=201, Percent_Identity=23.8805970149254, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17551702, Length=259, Percent_Identity=26.6409266409266, Blast_Score=65, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17538654, Length=208, Percent_Identity=25.4807692307692, Blast_Score=65, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17556528, Length=227, Percent_Identity=26.431718061674, Blast_Score=64, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6323217, Length=245, Percent_Identity=25.7142857142857, Blast_Score=79, Evalue=7e-16, Organism=Saccharomyces cerevisiae, GI6324985, Length=232, Percent_Identity=26.2931034482759, Blast_Score=77, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6324498, Length=244, Percent_Identity=25.4098360655738, Blast_Score=75, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6322980, Length=236, Percent_Identity=25.8474576271186, Blast_Score=72, Evalue=8e-14, Organism=Saccharomyces cerevisiae, GI6319856, Length=202, Percent_Identity=29.2079207920792, Blast_Score=71, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6324904, Length=192, Percent_Identity=27.6041666666667, Blast_Score=71, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6322640, Length=245, Percent_Identity=26.9387755102041, Blast_Score=70, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6322957, Length=223, Percent_Identity=27.3542600896861, Blast_Score=69, Evalue=5e-13, Organism=Saccharomyces cerevisiae, GI6321121, Length=199, Percent_Identity=29.6482412060301, Blast_Score=67, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6323959, Length=158, Percent_Identity=27.2151898734177, Blast_Score=66, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6321752, Length=248, Percent_Identity=26.2096774193548, Blast_Score=65, Evalue=8e-12, Organism=Saccharomyces cerevisiae, GI6320614, Length=196, Percent_Identity=26.0204081632653, Blast_Score=65, Evalue=9e-12, Organism=Saccharomyces cerevisiae, GI6325199, Length=194, Percent_Identity=25.7731958762887, Blast_Score=65, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6324727, Length=189, Percent_Identity=25.3968253968254, Blast_Score=64, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6320339, Length=247, Percent_Identity=25.5060728744939, Blast_Score=64, Evalue=3e-11, Organism=Drosophila melanogaster, GI24666092, Length=218, Percent_Identity=36.2385321100917, Blast_Score=123, Evalue=1e-28, Organism=Drosophila melanogaster, GI28574150, Length=218, Percent_Identity=32.5688073394495, Blast_Score=115, Evalue=3e-26, Organism=Drosophila melanogaster, GI116007328, Length=218, Percent_Identity=32.5688073394495, Blast_Score=115, Evalue=3e-26, Organism=Drosophila melanogaster, GI221512771, Length=236, Percent_Identity=30.0847457627119, Blast_Score=107, Evalue=6e-24, Organism=Drosophila melanogaster, GI116007184, Length=222, Percent_Identity=29.2792792792793, Blast_Score=106, Evalue=2e-23, Organism=Drosophila melanogaster, GI221500365, Length=219, Percent_Identity=29.6803652968037, Blast_Score=105, Evalue=2e-23, Organism=Drosophila melanogaster, GI24581191, Length=219, Percent_Identity=28.7671232876712, Blast_Score=101, Evalue=4e-22, Organism=Drosophila melanogaster, GI24581189, Length=219, Percent_Identity=28.7671232876712, Blast_Score=101, Evalue=4e-22, Organism=Drosophila melanogaster, GI24581193, Length=219, Percent_Identity=28.7671232876712, Blast_Score=101, Evalue=4e-22, Organism=Drosophila melanogaster, GI24581195, Length=219, Percent_Identity=28.7671232876712, Blast_Score=101, Evalue=4e-22, Organism=Drosophila melanogaster, GI24648314, Length=220, Percent_Identity=27.7272727272727, Blast_Score=101, Evalue=6e-22, Organism=Drosophila melanogaster, GI28573573, Length=214, Percent_Identity=29.9065420560748, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI28573571, Length=214, Percent_Identity=29.9065420560748, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI24643674, Length=229, Percent_Identity=29.6943231441048, Blast_Score=96, Evalue=2e-20, Organism=Drosophila melanogaster, GI24581407, Length=188, Percent_Identity=32.9787234042553, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI24650855, Length=238, Percent_Identity=28.9915966386555, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI85725262, Length=224, Percent_Identity=29.4642857142857, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI24650853, Length=238, Percent_Identity=28.9915966386555, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI45552199, Length=188, Percent_Identity=32.9787234042553, Blast_Score=92, Evalue=2e-19, Organism=Drosophila melanogaster, GI281362751, Length=238, Percent_Identity=28.9915966386555, Blast_Score=92, Evalue=3e-19, Organism=Drosophila melanogaster, GI24662800, Length=217, Percent_Identity=26.2672811059908, Blast_Score=92, Evalue=4e-19, Organism=Drosophila melanogaster, GI23397593, Length=238, Percent_Identity=27.3109243697479, Blast_Score=85, Evalue=5e-17, Organism=Drosophila melanogaster, GI24582014, Length=231, Percent_Identity=28.1385281385281, Blast_Score=85, Evalue=5e-17, Organism=Drosophila melanogaster, GI24582012, Length=231, Percent_Identity=28.1385281385281, Blast_Score=85, Evalue=5e-17, Organism=Drosophila melanogaster, GI28574533, Length=221, Percent_Identity=25.7918552036199, Blast_Score=85, Evalue=5e-17, Organism=Drosophila melanogaster, GI85724858, Length=220, Percent_Identity=27.7272727272727, Blast_Score=84, Evalue=7e-17, Organism=Drosophila melanogaster, GI85724856, Length=220, Percent_Identity=27.7272727272727, Blast_Score=84, Evalue=7e-17, Organism=Drosophila melanogaster, GI24580547, Length=220, Percent_Identity=27.7272727272727, Blast_Score=84, Evalue=7e-17, Organism=Drosophila melanogaster, GI24580551, Length=220, Percent_Identity=27.7272727272727, Blast_Score=84, Evalue=7e-17, Organism=Drosophila melanogaster, GI24580549, Length=220, Percent_Identity=27.7272727272727, Blast_Score=84, Evalue=7e-17, Organism=Drosophila melanogaster, GI24580545, Length=220, Percent_Identity=27.7272727272727, Blast_Score=84, Evalue=7e-17, Organism=Drosophila melanogaster, GI161076682, Length=208, Percent_Identity=26.4423076923077, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI24659289, Length=225, Percent_Identity=28.8888888888889, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI161076684, Length=208, Percent_Identity=26.4423076923077, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI24581617, Length=208, Percent_Identity=26.4423076923077, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI24581615, Length=208, Percent_Identity=26.4423076923077, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI85816269, Length=218, Percent_Identity=23.394495412844, Blast_Score=81, Evalue=7e-16, Organism=Drosophila melanogaster, GI24580553, Length=218, Percent_Identity=23.394495412844, Blast_Score=81, Evalue=7e-16, Organism=Drosophila melanogaster, GI85724864, Length=217, Percent_Identity=23.5023041474654, Blast_Score=81, Evalue=8e-16, Organism=Drosophila melanogaster, GI24580555, Length=217, Percent_Identity=23.5023041474654, Blast_Score=81, Evalue=8e-16, Organism=Drosophila melanogaster, GI24641565, Length=170, Percent_Identity=31.1764705882353, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI28574744, Length=216, Percent_Identity=25, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI19920532, Length=232, Percent_Identity=23.2758620689655, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI24580930, Length=232, Percent_Identity=23.2758620689655, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI85726357, Length=167, Percent_Identity=31.7365269461078, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI17136592, Length=225, Percent_Identity=23.1111111111111, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI28571209, Length=231, Percent_Identity=25.5411255411255, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI24581409, Length=155, Percent_Identity=32.9032258064516, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI24650986, Length=219, Percent_Identity=28.310502283105, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI21358185, Length=219, Percent_Identity=28.310502283105, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI21357907, Length=171, Percent_Identity=29.8245614035088, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI281363262, Length=223, Percent_Identity=26.9058295964126, Blast_Score=71, Evalue=5e-13, Organism=Drosophila melanogaster, GI24653245, Length=216, Percent_Identity=26.8518518518519, Blast_Score=71, Evalue=8e-13, Organism=Drosophila melanogaster, GI17136662, Length=218, Percent_Identity=27.0642201834862, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI221474134, Length=217, Percent_Identity=27.1889400921659, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI17647959, Length=240, Percent_Identity=26.25, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24585091, Length=223, Percent_Identity=28.6995515695067, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI45552353, Length=216, Percent_Identity=28.2407407407407, Blast_Score=68, Evalue=4e-12, Organism=Drosophila melanogaster, GI45552341, Length=216, Percent_Identity=28.2407407407407, Blast_Score=68, Evalue=4e-12, Organism=Drosophila melanogaster, GI45552357, Length=214, Percent_Identity=28.5046728971963, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI45552349, Length=216, Percent_Identity=28.2407407407407, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI24583969, Length=216, Percent_Identity=28.2407407407407, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI45552351, Length=214, Percent_Identity=28.5046728971963, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI45552337, Length=216, Percent_Identity=28.2407407407407, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI45552363, Length=214, Percent_Identity=28.5046728971963, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI45552335, Length=216, Percent_Identity=28.2407407407407, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI45552359, Length=216, Percent_Identity=28.2407407407407, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI45550972, Length=216, Percent_Identity=28.2407407407407, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI45552345, Length=216, Percent_Identity=28.2407407407407, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI45552347, Length=216, Percent_Identity=28.2407407407407, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI45552339, Length=214, Percent_Identity=28.5046728971963, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI45552343, Length=214, Percent_Identity=28.5046728971963, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI45552355, Length=216, Percent_Identity=28.2407407407407, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI45552361, Length=216, Percent_Identity=28.2407407407407, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI17647219, Length=191, Percent_Identity=23.5602094240838, Blast_Score=67, Evalue=7e-12, Organism=Drosophila melanogaster, GI45552805, Length=184, Percent_Identity=23.9130434782609, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552437, Length=246, Percent_Identity=24.390243902439, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24585557, Length=246, Percent_Identity=24.390243902439, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24649703, Length=228, Percent_Identity=26.3157894736842, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI24666836, Length=196, Percent_Identity=28.0612244897959, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI28574259, Length=228, Percent_Identity=26.7543859649123, Blast_Score=65, Evalue=5e-11, Organism=Drosophila melanogaster, GI161077321, Length=214, Percent_Identity=26.1682242990654, Blast_Score=65, Evalue=5e-11,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 27172; Mature: 27040
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQITLKAQNLAKSYKSRQVVKDVSLTVKTGQVVGLLGPNGAGKTTTFYMVVGLVKSDKG CCEEEEEHHHHHHHHHHHHHHHHHEEEEECCEEEEEECCCCCCCCEEEEEEEEEEECCCC HIFIDDDDLTADPMHLRARKGIGYLPQEASIFRKLTVHDNIMAVLQTRKELNRDQREEEL EEEECCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH EHLLEEFHITHIRDSQGMSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKK HHHHHHHCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHH IIEQLKSRGLGVLITDHNVRETLDVCEHAYIVSHGNLIAEGTPAEILDNQQVRAVYLGEQ HHHHHHHCCCEEEEECCCHHHHHHHHHHEEEEECCCEEECCCCHHHHCCCCEEEEEECCC FRL CCC >Mature Secondary Structure TQITLKAQNLAKSYKSRQVVKDVSLTVKTGQVVGLLGPNGAGKTTTFYMVVGLVKSDKG CEEEEEHHHHHHHHHHHHHHHHHEEEEECCEEEEEECCCCCCCCEEEEEEEEEEECCCC HIFIDDDDLTADPMHLRARKGIGYLPQEASIFRKLTVHDNIMAVLQTRKELNRDQREEEL EEEECCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH EHLLEEFHITHIRDSQGMSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKK HHHHHHHCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHH IIEQLKSRGLGVLITDHNVRETLDVCEHAYIVSHGNLIAEGTPAEILDNQQVRAVYLGEQ HHHHHHHCCCEEEEECCCHHHHHHHHHHEEEEECCCEEECCCCHHHHCCCCEEEEEECCC FRL CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]