Click here to switch to the map view.

The map label for this gene is narP [H]

Identifier: 117919108

GI number: 117919108

Start: 775653

End: 776282

Strand: Reverse

Name: narP [H]

Synonym: Shewana3_0656

Alternate gene names: 117919108

Gene position: 776282-775653 (Counterclockwise)

Preceding gene: 117919109

Following gene: 117919106

Centisome position: 15.61

GC content: 49.68

Gene sequence:

>630_bases
ATGGGTAAACCTTATTCAGTCCTCGTGGTCGATGACCATCCCCTCCTACGTAAAGGGATCTGCCAACTGATCGCCTCCGA
TCCAGATTTTAGTCTCTTCGGCGAAGTCGGCGGAGGCTTAGATGCCTTAAGCGCCGTTGCCACCGATGAGCCCGATATTG
TACTGCTGGATCTGAATATGAAGGGAATGACAGGACTCGATACCCTCAATGCCATGCGCCAGGAAGGCGTGACCTCACGG
ATAGTAATCCTCACAGTGTCGGATGCCAAACAAGATGTTATTCGACTGCTACGCGCGGGCGCCGACGGATATTTGCTTAA
AGATACCGAGCCGGATCTGCTGCTCGATAAGCTCAAAAATGCCATGTTGGGCCACAGAGTGATCAGCGATGAAGTTGAAG
AATATCTGTACGAGCTTAAAAATGCCGCCGATGAGCAGGAATGGATTTCAAGCCTCACGCCAAGGGAACTACAGATCCTG
CAACAGCTGGCAGAAGGGTTAAGTAACCGGATGATTTCAGAGCACTTACATATCAGTGAAGGCACGGTAAAAGTACACGT
TAAAAATCTGCTGCGTAAGGCCAATGCCAAGTCGAGAACCGAAATGGCGGTAAGGTATCTGAACAACTAA

Upstream 100 bases:

>100_bases
CAAGAACAACCGGATGTGCCCTTAGCGTCTAATAACAAATCCAATTTGTCACAGGGAACCAAAGTTACTTTAATCTTCCC
TTCCCAACAGGAGCCTACAC

Downstream 100 bases:

>100_bases
CGCTTCAAATCGAGTGGTTCAGCACTAAGCTAAAAAACAAAGGCAATCAATCGATTGCCTTTATTGTCTGCAGGAGTAGA
AATTTGTGCTATCGCCCTTT

Product: two component LuxR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MGKPYSVLVVDDHPLLRKGICQLIASDPDFSLFGEVGGGLDALSAVATDEPDIVLLDLNMKGMTGLDTLNAMRQEGVTSR
IVILTVSDAKQDVIRLLRAGADGYLLKDTEPDLLLDKLKNAMLGHRVISDEVEEYLYELKNAADEQEWISSLTPRELQIL
QQLAEGLSNRMISEHLHISEGTVKVHVKNLLRKANAKSRTEMAVRYLNN

Sequences:

>Translated_209_residues
MGKPYSVLVVDDHPLLRKGICQLIASDPDFSLFGEVGGGLDALSAVATDEPDIVLLDLNMKGMTGLDTLNAMRQEGVTSR
IVILTVSDAKQDVIRLLRAGADGYLLKDTEPDLLLDKLKNAMLGHRVISDEVEEYLYELKNAADEQEWISSLTPRELQIL
QQLAEGLSNRMISEHLHISEGTVKVHVKNLLRKANAKSRTEMAVRYLNN
>Mature_208_residues
GKPYSVLVVDDHPLLRKGICQLIASDPDFSLFGEVGGGLDALSAVATDEPDIVLLDLNMKGMTGLDTLNAMRQEGVTSRI
VILTVSDAKQDVIRLLRAGADGYLLKDTEPDLLLDKLKNAMLGHRVISDEVEEYLYELKNAADEQEWISSLTPRELQILQ
QLAEGLSNRMISEHLHISEGTVKVHVKNLLRKANAKSRTEMAVRYLNN

Specific function: This protein activates the expression of the nitrate reductase (narGHJI) and formate dehydrogenase-N (fdnGHI) operons and represses the transcription of the fumarate reductase (frdABCD) operon in response to a nitrate/nitrite induction signal transmitted

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788521, Length=206, Percent_Identity=50, Blast_Score=212, Evalue=1e-56,
Organism=Escherichia coli, GI1787473, Length=204, Percent_Identity=45.0980392156863, Blast_Score=153, Evalue=1e-38,
Organism=Escherichia coli, GI1788222, Length=206, Percent_Identity=29.6116504854369, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI1790102, Length=204, Percent_Identity=29.4117647058824, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI1786747, Length=200, Percent_Identity=24.5, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI1788712, Length=193, Percent_Identity=24.8704663212435, Blast_Score=75, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 23150; Mature: 23019

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKPYSVLVVDDHPLLRKGICQLIASDPDFSLFGEVGGGLDALSAVATDEPDIVLLDLNM
CCCCEEEEEECCCHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHCCCCCCEEEEECCC
KGMTGLDTLNAMRQEGVTSRIVILTVSDAKQDVIRLLRAGADGYLLKDTEPDLLLDKLKN
CCCCCHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHH
AMLGHRVISDEVEEYLYELKNAADEQEWISSLTPRELQILQQLAEGLSNRMISEHLHISE
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
GTVKVHVKNLLRKANAKSRTEMAVRYLNN
CEEEHHHHHHHHHCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
GKPYSVLVVDDHPLLRKGICQLIASDPDFSLFGEVGGGLDALSAVATDEPDIVLLDLNM
CCCEEEEEECCCHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHCCCCCCEEEEECCC
KGMTGLDTLNAMRQEGVTSRIVILTVSDAKQDVIRLLRAGADGYLLKDTEPDLLLDKLKN
CCCCCHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHH
AMLGHRVISDEVEEYLYELKNAADEQEWISSLTPRELQILQQLAEGLSNRMISEHLHISE
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
GTVKVHVKNLLRKANAKSRTEMAVRYLNN
CEEEHHHHHHHHHCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8501030; 9278503 [H]