| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is zntB [H]
Identifier: 117919106
GI number: 117919106
Start: 774044
End: 775021
Strand: Reverse
Name: zntB [H]
Synonym: Shewana3_0654
Alternate gene names: 117919106
Gene position: 775021-774044 (Counterclockwise)
Preceding gene: 117919108
Following gene: 117919102
Centisome position: 15.59
GC content: 51.64
Gene sequence:
>978_bases ATGGAATGCGATATGCACGATGGATTTATCTACAGCTTAGTGCTTAGCGGCGCGCGCGCGGGGTCAACCTTAACCCCAGA AGAGCTTGAGAACTGGGATCCCAATGATGGGCTGATCTGGATACACCTACGTTATCGCCACAAAAAAGCCCGCCACTGGG TATTAAATAGCGGCTTGAATAAAGTCGAAAGTGACGCCCTGCTCGCCCAGGATACTCGCCCGCGGGCCGTACTGGCTGGT GAAGGCGTTTTGCTGGCCCTACGCGGGGTTAACTTAAACCCCAATTCAGCCCCAGAAGACATGGTCGCGGTGCGTATTTA CGCCGATAAACAGCGGATTATCTCAACCTGCGATCGTGAGTTGCTCTCAGTCAAAGATGTTGCCGAACTCATTATGGAAG GCGCAGGCCCCACCACCACAGGGGACTTTATCGTCGCCGTATGCGAAAGACTCACCACCCGTAAAGTGGATTTTATCGAC ACCCTCGAAGAGCAGCTGTCTGAGTTAGAAGAACAAGTAGTCTCTGGCAATGTAAAAGACTTACGCACAGATATCGCCGA GCTACGCAGGCAAACCGTGGCGCTACGACGTTATTTAGGCCCGCAGAAAGAAGCTTACGCTAAGATGCTGTCCGATCAAT TTGTGCTGTTTAACGAGCCCGAAAGACTCAAGATGCGTGAAACCACGGACAAACTGATCCGCACCATTGAAGACTTAGAC GCCCTGCGTGACCGAGCCAATGTGACCCAGGAAGAATTACTCAGCCAACAATCGGAGCAGCTAAACAAGCGCTTGTATTT CTTATCCTTAGTCTCGGCAATCTTCTTACCGCTAGGCTTTTTAACCGGCTTGCTTGGGGTGAATATTGGCGGCATTCCCG GTGCGGATAACACTTGGGCCTTTGCGACCTTCTGCGGCATTCTTATCTCGCTGGTCGCCCTGCAAATGGCACTCTTCTAT CGCTTTAAGTGGTTGTAG
Upstream 100 bases:
>100_bases AATTTAGCCCCACCAAGGGCTGCAATTGTCAGCACAATCATCGCCTAGACTTCATTTTCACAACGAAATCAGTTAGCTTG AGTCCATGATTTAGCAAGAG
Downstream 100 bases:
>100_bases ATTGGAATAAAAAACGCCAATCACATGATTGGCGTTTTGTTTTGTGGATTGCCGTTACTGCGGCAACTCAAACAGATTTG TCATGACTTTATACAGCTCG
Product: Mg2 transporter protein, CorA family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MECDMHDGFIYSLVLSGARAGSTLTPEELENWDPNDGLIWIHLRYRHKKARHWVLNSGLNKVESDALLAQDTRPRAVLAG EGVLLALRGVNLNPNSAPEDMVAVRIYADKQRIISTCDRELLSVKDVAELIMEGAGPTTTGDFIVAVCERLTTRKVDFID TLEEQLSELEEQVVSGNVKDLRTDIAELRRQTVALRRYLGPQKEAYAKMLSDQFVLFNEPERLKMRETTDKLIRTIEDLD ALRDRANVTQEELLSQQSEQLNKRLYFLSLVSAIFLPLGFLTGLLGVNIGGIPGADNTWAFATFCGILISLVALQMALFY RFKWL
Sequences:
>Translated_325_residues MECDMHDGFIYSLVLSGARAGSTLTPEELENWDPNDGLIWIHLRYRHKKARHWVLNSGLNKVESDALLAQDTRPRAVLAG EGVLLALRGVNLNPNSAPEDMVAVRIYADKQRIISTCDRELLSVKDVAELIMEGAGPTTTGDFIVAVCERLTTRKVDFID TLEEQLSELEEQVVSGNVKDLRTDIAELRRQTVALRRYLGPQKEAYAKMLSDQFVLFNEPERLKMRETTDKLIRTIEDLD ALRDRANVTQEELLSQQSEQLNKRLYFLSLVSAIFLPLGFLTGLLGVNIGGIPGADNTWAFATFCGILISLVALQMALFY RFKWL >Mature_325_residues MECDMHDGFIYSLVLSGARAGSTLTPEELENWDPNDGLIWIHLRYRHKKARHWVLNSGLNKVESDALLAQDTRPRAVLAG EGVLLALRGVNLNPNSAPEDMVAVRIYADKQRIISTCDRELLSVKDVAELIMEGAGPTTTGDFIVAVCERLTTRKVDFID TLEEQLSELEEQVVSGNVKDLRTDIAELRRQTVALRRYLGPQKEAYAKMLSDQFVLFNEPERLKMRETTDKLIRTIEDLD ALRDRANVTQEELLSQQSEQLNKRLYFLSLVSAIFLPLGFLTGLLGVNIGGIPGADNTWAFATFCGILISLVALQMALFY RFKWL
Specific function: Mediates efflux of zinc ions [H]
COG id: COG0598
COG function: function code P; Mg2+ and Co2+ transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family [H]
Homologues:
Organism=Escherichia coli, GI1787604, Length=288, Percent_Identity=36.8055555555556, Blast_Score=211, Evalue=4e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002523 [H]
Pfam domain/function: PF01544 CorA [H]
EC number: NA
Molecular weight: Translated: 36629; Mature: 36629
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MECDMHDGFIYSLVLSGARAGSTLTPEELENWDPNDGLIWIHLRYRHKKARHWVLNSGLN CCCCCCCCHHHHHHHHCCCCCCCCCHHHHHCCCCCCCEEEEEEEEHHHHHHHHHHHHCCC KVESDALLAQDTRPRAVLAGEGVLLALRGVNLNPNSAPEDMVAVRIYADKQRIISTCDRE HHHHHHHHHCCCCCCEEEECCCEEEEEECCCCCCCCCCCCEEEEEEECCHHHHHHHHHHH LLSVKDVAELIMEGAGPTTTGDFIVAVCERLTTRKVDFIDTLEEQLSELEEQVVSGNVKD HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHH LRTDIAELRRQTVALRRYLGPQKEAYAKMLSDQFVLFNEPERLKMRETTDKLIRTIEDLD HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHH ALRDRANVTQEELLSQQSEQLNKRLYFLSLVSAIFLPLGFLTGLLGVNIGGIPGADNTWA HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH FATFCGILISLVALQMALFYRFKWL HHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MECDMHDGFIYSLVLSGARAGSTLTPEELENWDPNDGLIWIHLRYRHKKARHWVLNSGLN CCCCCCCCHHHHHHHHCCCCCCCCCHHHHHCCCCCCCEEEEEEEEHHHHHHHHHHHHCCC KVESDALLAQDTRPRAVLAGEGVLLALRGVNLNPNSAPEDMVAVRIYADKQRIISTCDRE HHHHHHHHHCCCCCCEEEECCCEEEEEECCCCCCCCCCCCEEEEEEECCHHHHHHHHHHH LLSVKDVAELIMEGAGPTTTGDFIVAVCERLTTRKVDFIDTLEEQLSELEEQVVSGNVKD HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHH LRTDIAELRRQTVALRRYLGPQKEAYAKMLSDQFVLFNEPERLKMRETTDKLIRTIEDLD HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHH ALRDRANVTQEELLSQQSEQLNKRLYFLSLVSAIFLPLGFLTGLLGVNIGGIPGADNTWA HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH FATFCGILISLVALQMALFYRFKWL HHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA