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The map label for this gene is rsgA [H]

Identifier: 117919042

GI number: 117919042

Start: 690857

End: 691921

Strand: Reverse

Name: rsgA [H]

Synonym: Shewana3_0589

Alternate gene names: 117919042

Gene position: 691921-690857 (Counterclockwise)

Preceding gene: 117919067

Following gene: 117919041

Centisome position: 13.92

GC content: 50.23

Gene sequence:

>1065_bases
GTGAGTAAAAAGAAACCCCTAAGCCAAGGCCAATTACGCCGTATGCGCGCCAATCACGAGAAACGCCTCAATCGTGACAA
TGGTGATAAAAATGCGCCTGAGTTACAGGATAGCTCACTCGGCCCAGAACAGAGCGGAACCGTGATCTCCCGCTTTGGCC
AACATGCCGATATTGAAACCGAAGATGGCCAAATCGTGCGCTGCAATATTCGCCGCACCATTAAGAGCTTAGTCACCGGC
GATAAAGTGATTGTACGCCTCGCCATTGAAACCCAAGCCAACAGTGGTATTGCCGGCATTGTTGAGGCGGTACACCCAAG
ACGCTCTTCCCTCTCGCGCCCCGACTTATACGATGGCGTGAAAATTATCGCCTCGAATATCGACCAAATTTTGATTGTGT
CTTCGGTATTGCCTAGCTTTACCACCCAGATTATCGACCGCTACTTAGTCGCAGCCGAAGACACGGATATTCCGCCGATC
ATCATTTTGAATAAAATCGATCTGCTAACGCCAGAAGAAGCCCCCGCCATCGAAGCCGCCTTAAAGCGCTACGAAGCTAT
CGGTTATCCCGTGTATAAGGTCAGCAGTAAATTAGGCGAAGGCTTAGATACCATTAAAGCCCTGCTGAAAGATAAAGTGA
GCGTATTTGCTGGCCAGTCCGGTGTGGGTAAATCTTCACTGGTCAATGCCTTACTGCCCGAAGCCGAATTACTGGTGGGC
GATGTCTCCGACAACTCAGGGCTGGGTCAACACACGACCACCACGGCTAAATTGCTGCATTTACCCAGCGGTGGTGATTT
AATTGATTCCCCCGGCGTGCGCGAATTTGCCCTCTGGCACTTACCCGCCCAACGTGTCGGTTGGTGTTTTATCGAATTTA
GAGACTTTTTAGGTGGCTGCAAATTCCGCGATTGTAAGCATGGCGATGATCCGGGCTGTGCCTTAAAAGCCGCTGTCGAT
GCGGGTAAAATTAGCGAAGATCGCTTTAATAACTACCATCGAATTATCGCAAGCCTAGATGAGCAGCGCCATGCACGGCA
TTTTCGTGCCCAAAGCGATGAATAA

Upstream 100 bases:

>100_bases
TCATGTCAGTTAGCCTAAATTCAGGCTTTTTTATTCAAGAGCGTGTATCATACTGCTTTTTTCAGACACAAAAAATCATC
TAATTGACGAAGACAAATCA

Downstream 100 bases:

>100_bases
CGAACGCCATCGTTTTGCATAAAATTAACGTAAAACAAGTCTCAACCTAAGTTGAGCAACATAAAGGAAAGGAACATAAA
TTGGATAAAGTTAAAATTGC

Product: ribosome-associated GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 353

Protein sequence:

>354_residues
MSKKKPLSQGQLRRMRANHEKRLNRDNGDKNAPELQDSSLGPEQSGTVISRFGQHADIETEDGQIVRCNIRRTIKSLVTG
DKVIVRLAIETQANSGIAGIVEAVHPRRSSLSRPDLYDGVKIIASNIDQILIVSSVLPSFTTQIIDRYLVAAEDTDIPPI
IILNKIDLLTPEEAPAIEAALKRYEAIGYPVYKVSSKLGEGLDTIKALLKDKVSVFAGQSGVGKSSLVNALLPEAELLVG
DVSDNSGLGQHTTTTAKLLHLPSGGDLIDSPGVREFALWHLPAQRVGWCFIEFRDFLGGCKFRDCKHGDDPGCALKAAVD
AGKISEDRFNNYHRIIASLDEQRHARHFRAQSDE

Sequences:

>Translated_354_residues
MSKKKPLSQGQLRRMRANHEKRLNRDNGDKNAPELQDSSLGPEQSGTVISRFGQHADIETEDGQIVRCNIRRTIKSLVTG
DKVIVRLAIETQANSGIAGIVEAVHPRRSSLSRPDLYDGVKIIASNIDQILIVSSVLPSFTTQIIDRYLVAAEDTDIPPI
IILNKIDLLTPEEAPAIEAALKRYEAIGYPVYKVSSKLGEGLDTIKALLKDKVSVFAGQSGVGKSSLVNALLPEAELLVG
DVSDNSGLGQHTTTTAKLLHLPSGGDLIDSPGVREFALWHLPAQRVGWCFIEFRDFLGGCKFRDCKHGDDPGCALKAAVD
AGKISEDRFNNYHRIIASLDEQRHARHFRAQSDE
>Mature_353_residues
SKKKPLSQGQLRRMRANHEKRLNRDNGDKNAPELQDSSLGPEQSGTVISRFGQHADIETEDGQIVRCNIRRTIKSLVTGD
KVIVRLAIETQANSGIAGIVEAVHPRRSSLSRPDLYDGVKIIASNIDQILIVSSVLPSFTTQIIDRYLVAAEDTDIPPII
ILNKIDLLTPEEAPAIEAALKRYEAIGYPVYKVSSKLGEGLDTIKALLKDKVSVFAGQSGVGKSSLVNALLPEAELLVGD
VSDNSGLGQHTTTTAKLLHLPSGGDLIDSPGVREFALWHLPAQRVGWCFIEFRDFLGGCKFRDCKHGDDPGCALKAAVDA
GKISEDRFNNYHRIIASLDEQRHARHFRAQSDE

Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover [H]

COG id: COG1162

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 engC GTPase domain [H]

Homologues:

Organism=Escherichia coli, GI87082381, Length=354, Percent_Identity=55.3672316384181, Blast_Score=392, Evalue=1e-110,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010914
- InterPro:   IPR004881 [H]

Pfam domain/function: PF03193 DUF258 [H]

EC number: NA

Molecular weight: Translated: 38774; Mature: 38642

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: PS50936 ENGC_GTPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKKPLSQGQLRRMRANHEKRLNRDNGDKNAPELQDSSLGPEQSGTVISRFGQHADIET
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCC
EDGQIVRCNIRRTIKSLVTGDKVIVRLAIETQANSGIAGIVEAVHPRRSSLSRPDLYDGV
CCCCEEEEHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHHHCCHHHCCCCCCHHHHH
KIIASNIDQILIVSSVLPSFTTQIIDRYLVAAEDTDIPPIIILNKIDLLTPEEAPAIEAA
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHHHHH
LKRYEAIGYPVYKVSSKLGEGLDTIKALLKDKVSVFAGQSGVGKSSLVNALLPEAELLVG
HHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEE
DVSDNSGLGQHTTTTAKLLHLPSGGDLIDSPGVREFALWHLPAQRVGWCFIEFRDFLGGC
ECCCCCCCCCCCCHHEEEEECCCCCCCCCCCCCCHHHEECCCHHHHHHHHEEHHHHHCCC
KFRDCKHGDDPGCALKAAVDAGKISEDRFNNYHRIIASLDEQRHARHFRAQSDE
CCCCCCCCCCCCCEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SKKKPLSQGQLRRMRANHEKRLNRDNGDKNAPELQDSSLGPEQSGTVISRFGQHADIET
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCC
EDGQIVRCNIRRTIKSLVTGDKVIVRLAIETQANSGIAGIVEAVHPRRSSLSRPDLYDGV
CCCCEEEEHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHHHCCHHHCCCCCCHHHHH
KIIASNIDQILIVSSVLPSFTTQIIDRYLVAAEDTDIPPIIILNKIDLLTPEEAPAIEAA
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHHHHH
LKRYEAIGYPVYKVSSKLGEGLDTIKALLKDKVSVFAGQSGVGKSSLVNALLPEAELLVG
HHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEE
DVSDNSGLGQHTTTTAKLLHLPSGGDLIDSPGVREFALWHLPAQRVGWCFIEFRDFLGGC
ECCCCCCCCCCCCHHEEEEECCCCCCCCCCCCCCHHHEECCCHHHHHHHHEEHHHHHCCC
KFRDCKHGDDPGCALKAAVDAGKISEDRFNNYHRIIASLDEQRHARHFRAQSDE
CCCCCCCCCCCCCEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]