| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117919026
Identifier: 117919026
GI number: 117919026
Start: 665732
End: 666691
Strand: Reverse
Name: 117919026
Synonym: Shewana3_0573
Alternate gene names: NA
Gene position: 666691-665732 (Counterclockwise)
Preceding gene: 117919027
Following gene: 117919024
Centisome position: 13.41
GC content: 53.12
Gene sequence:
>960_bases ATGGCGCGTATTATCCCCTCGGTATTGAGCCTAGCCTTAGCTCTCGCCAGTGCGAGCTTATTCGCCGCCGATCCCAGCTC TCAAGCGCCAGACCCCAATACTCAGGCGCCAGAGACAACTCCCCAAAACGCCGAGACGAACCAATCTAGCAAAGCGCCCA ATGGGCAAGCTGCGGCGAAAAGAGCGAGCAGTTATTTACCCGCGAGTGAGATCAAGCAGATCACCATAGATGATCAACCG CTCGAACTCTTAGTCCGTTCATGGGAAGGCCGCAAAAAACTCGGCGCCGCGATTATCTTACCCGCCACCAATGGCACCGC CGATGCGCCCGGATTAATGGCCTTTGTCAGACGTAATATCAATGCGGCCGGCTGGGCCAGTTTAAGCCTTACCCCGCCCA CAGAGCCGCCTGCGCCTAACTTCGCCACTCCGGCGACCGAAGTGACCTCTGCGGGTTCGGCGCAGTTAAGCAGCCCTTCG AATAAACCGAGCCAAAAAGTGAAACCCGAGCAGAGCAATAAGCATCTGCTTGAACAGGAAGACTTTTTAGTCAAAAGCAT GTCACAGCTCGACAGTGTAGGCACCGACTTCCCCGGTAAACGAGTGCTGATCACCGCCGATCAAAGTGCGGGATTATTGA TAAGCCTATTAAGCCAAAAGAAAATTGCCGATCCAGATGTCTTAATCGTCATCAATCCCTACAGTGAAGATGAGACGCGT AACCAAGCCATCGCCGAGAAACTGGCCAAGCTCACTATGCCAATACTCGATATTCAATCACCCGATGGTCACCCCGCGTC GTTAGAAACGGCAGAGCAACGCAAAAGCCTCGCCGTTACCTTAGAGTCACCGAATTATCGGCAAACGACATTGGCATTAA ATCTAGATAACGAGAGTGCATGGCAGAATTGTTTAAGCGCCATTAGGGGATTCGCCGCCCGTATGAGCGGCGCCAATTGA
Upstream 100 bases:
>100_bases CGCCGTCACGAGCTCAAGCAAAAATTGCTTCTGCTACGCCGCTTCAGGTTATACTCTAGCTAATTGAATTTATGAGACTA CACAGGTGGTTATCAATTCT
Downstream 100 bases:
>100_bases GGTGCAAGCTTTTCTAAAGCTTAAGTAATCCGTTGTTATGGTGTTATCTAGATAGAATGATGCTACTACCAACCCGATTG GCGATCTTGATAGGCTTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 319; Mature: 318
Protein sequence:
>319_residues MARIIPSVLSLALALASASLFAADPSSQAPDPNTQAPETTPQNAETNQSSKAPNGQAAAKRASSYLPASEIKQITIDDQP LELLVRSWEGRKKLGAAIILPATNGTADAPGLMAFVRRNINAAGWASLSLTPPTEPPAPNFATPATEVTSAGSAQLSSPS NKPSQKVKPEQSNKHLLEQEDFLVKSMSQLDSVGTDFPGKRVLITADQSAGLLISLLSQKKIADPDVLIVINPYSEDETR NQAIAEKLAKLTMPILDIQSPDGHPASLETAEQRKSLAVTLESPNYRQTTLALNLDNESAWQNCLSAIRGFAARMSGAN
Sequences:
>Translated_319_residues MARIIPSVLSLALALASASLFAADPSSQAPDPNTQAPETTPQNAETNQSSKAPNGQAAAKRASSYLPASEIKQITIDDQP LELLVRSWEGRKKLGAAIILPATNGTADAPGLMAFVRRNINAAGWASLSLTPPTEPPAPNFATPATEVTSAGSAQLSSPS NKPSQKVKPEQSNKHLLEQEDFLVKSMSQLDSVGTDFPGKRVLITADQSAGLLISLLSQKKIADPDVLIVINPYSEDETR NQAIAEKLAKLTMPILDIQSPDGHPASLETAEQRKSLAVTLESPNYRQTTLALNLDNESAWQNCLSAIRGFAARMSGAN >Mature_318_residues ARIIPSVLSLALALASASLFAADPSSQAPDPNTQAPETTPQNAETNQSSKAPNGQAAAKRASSYLPASEIKQITIDDQPL ELLVRSWEGRKKLGAAIILPATNGTADAPGLMAFVRRNINAAGWASLSLTPPTEPPAPNFATPATEVTSAGSAQLSSPSN KPSQKVKPEQSNKHLLEQEDFLVKSMSQLDSVGTDFPGKRVLITADQSAGLLISLLSQKKIADPDVLIVINPYSEDETRN QAIAEKLAKLTMPILDIQSPDGHPASLETAEQRKSLAVTLESPNYRQTTLALNLDNESAWQNCLSAIRGFAARMSGAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33810; Mature: 33679
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARIIPSVLSLALALASASLFAADPSSQAPDPNTQAPETTPQNAETNQSSKAPNGQAAAK CCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH RASSYLPASEIKQITIDDQPLELLVRSWEGRKKLGAAIILPATNGTADAPGLMAFVRRNI HHHHCCCHHHCEEEEECCCHHHHHHHHCCCHHHCCEEEEEECCCCCCCCHHHHHHHHHCC NAAGWASLSLTPPTEPPAPNFATPATEVTSAGSAQLSSPSNKPSQKVKPEQSNKHLLEQE CCCCEEEEEECCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH DFLVKSMSQLDSVGTDFPGKRVLITADQSAGLLISLLSQKKIADPDVLIVINPYSEDETR HHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCHHH NQAIAEKLAKLTMPILDIQSPDGHPASLETAEQRKSLAVTLESPNYRQTTLALNLDNESA HHHHHHHHHHHHCCCEECCCCCCCCCCCHHHHCCCEEEEEECCCCCEEEEEEEECCCHHH WQNCLSAIRGFAARMSGAN HHHHHHHHHHHHHHHCCCC >Mature Secondary Structure ARIIPSVLSLALALASASLFAADPSSQAPDPNTQAPETTPQNAETNQSSKAPNGQAAAK CHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH RASSYLPASEIKQITIDDQPLELLVRSWEGRKKLGAAIILPATNGTADAPGLMAFVRRNI HHHHCCCHHHCEEEEECCCHHHHHHHHCCCHHHCCEEEEEECCCCCCCCHHHHHHHHHCC NAAGWASLSLTPPTEPPAPNFATPATEVTSAGSAQLSSPSNKPSQKVKPEQSNKHLLEQE CCCCEEEEEECCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH DFLVKSMSQLDSVGTDFPGKRVLITADQSAGLLISLLSQKKIADPDVLIVINPYSEDETR HHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCHHH NQAIAEKLAKLTMPILDIQSPDGHPASLETAEQRKSLAVTLESPNYRQTTLALNLDNESA HHHHHHHHHHHHCCCEECCCCCCCCCCCHHHHCCCEEEEEECCCCCEEEEEEEECCCHHH WQNCLSAIRGFAARMSGAN HHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA