| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
Click here to switch to the map view.
The map label for this gene is cheB3 [H]
Identifier: 117919024
GI number: 117919024
Start: 663306
End: 664301
Strand: Reverse
Name: cheB3 [H]
Synonym: Shewana3_0571
Alternate gene names: 117919024
Gene position: 664301-663306 (Counterclockwise)
Preceding gene: 117919026
Following gene: 117919023
Centisome position: 13.36
GC content: 50.2
Gene sequence:
>996_bases ATGACAATCTCTGTACTCATCTGTGACGATTCCGCCATGGCGCGCAAGCAAATGGCTCGTACCCTACCAAAAGAATGGGA TGTCGAGATCACCTACGCCACCAATGGTGCCGAAGGCTTAGATGCGATTCGCGCAGGTAAAGGCGAAGTCGTCTTCCTCG ATCTCAATATGCCAGTCATGGATGGTTACGAAGTGCTGCAGACCGTGCAGCAAAACGATCTCCCTGCGCTGATTATTGTG GTCTCGGGGGATATTCAGATCAAAGCCCATGAAAGGGTTAAAGCCCTAGGCGCATTGGATTTTATTCAAAAGCCCGTCAG TGCCGATGCCATCAGTAATATCCTGCAGGAATACGGCATCCTCACCTTAACGCAAAAAGATCAGGCGGAAGACACGCCGA TGATCAAAGTTGATATGCGTGACGCCTGCCAAGAGATCGCCAACGTCGCCATGGGGCGCGCCGCCGATCTGTTAGCCAAG CTCCTCGATGTTTTTGTCCTCTTGCCTATCCCAAATGTGAACGTACTCGAAGTCAGCGAGCTGACGATGGCACTCAAAGC GACGGAAGAAAGCTCAACAGTATCAGCCCTCTGCCAAGGATTTATTGGCGCAGGCGTGGCGGGAGAAGCCCTGCTGCTAT TCCACGATTCGAGCTTTCAAGACATGGCAAAACTCATGGGGCTGGCCAATCCCGAGGACATCAGCACTGAGATAGAAGTG TTGATCGACACTGGCAACGTATTGATTGGCGCCTTCCTGAACGGGATCTCAGAGCAGCTCGATATGAAGTTCAGCCAGGC TCACCCTGTGGTATTGGGCCGCCACTGTACGGTGAACGATCTCATCCATGATAACTCGGAAAAATGGCACAGAACCTTAG CAATGGAGATTAACTATCGTATTGAAAACCATAATGTTCAATGCGATTTGTTACTGCTATTTACCGAAGACTCTATTCCG ACGCTCAGTTATAAGCTCGGTTACTTACTCGATTAA
Upstream 100 bases:
>100_bases TGATATAAATCAAACTTGCCCGAAGAGCTTAATTCGTCATTCAAAGATTAAGAATTAGTGTTATCTTCAATAAATGGGCA AATAAGGATCTGTAGTCAGC
Downstream 100 bases:
>100_bases TCAGTTGGATTTTACCTTATGTCAAACGATCAAAGCGCAATGAACGAACTCCATTGGCTTATCGATATGGTGCAAACCAT CGAAGTGGGTCTAGTGGTAT
Product: response regulator receiver protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 331; Mature: 330
Protein sequence:
>331_residues MTISVLICDDSAMARKQMARTLPKEWDVEITYATNGAEGLDAIRAGKGEVVFLDLNMPVMDGYEVLQTVQQNDLPALIIV VSGDIQIKAHERVKALGALDFIQKPVSADAISNILQEYGILTLTQKDQAEDTPMIKVDMRDACQEIANVAMGRAADLLAK LLDVFVLLPIPNVNVLEVSELTMALKATEESSTVSALCQGFIGAGVAGEALLLFHDSSFQDMAKLMGLANPEDISTEIEV LIDTGNVLIGAFLNGISEQLDMKFSQAHPVVLGRHCTVNDLIHDNSEKWHRTLAMEINYRIENHNVQCDLLLLFTEDSIP TLSYKLGYLLD
Sequences:
>Translated_331_residues MTISVLICDDSAMARKQMARTLPKEWDVEITYATNGAEGLDAIRAGKGEVVFLDLNMPVMDGYEVLQTVQQNDLPALIIV VSGDIQIKAHERVKALGALDFIQKPVSADAISNILQEYGILTLTQKDQAEDTPMIKVDMRDACQEIANVAMGRAADLLAK LLDVFVLLPIPNVNVLEVSELTMALKATEESSTVSALCQGFIGAGVAGEALLLFHDSSFQDMAKLMGLANPEDISTEIEV LIDTGNVLIGAFLNGISEQLDMKFSQAHPVVLGRHCTVNDLIHDNSEKWHRTLAMEINYRIENHNVQCDLLLLFTEDSIP TLSYKLGYLLD >Mature_330_residues TISVLICDDSAMARKQMARTLPKEWDVEITYATNGAEGLDAIRAGKGEVVFLDLNMPVMDGYEVLQTVQQNDLPALIIVV SGDIQIKAHERVKALGALDFIQKPVSADAISNILQEYGILTLTQKDQAEDTPMIKVDMRDACQEIANVAMGRAADLLAKL LDVFVLLPIPNVNVLEVSELTMALKATEESSTVSALCQGFIGAGVAGEALLLFHDSSFQDMAKLMGLANPEDISTEIEVL IDTGNVLIGAFLNGISEQLDMKFSQAHPVVLGRHCTVNDLIHDNSEKWHRTLAMEINYRIENHNVQCDLLLLFTEDSIPT LSYKLGYLLD
Specific function: Involved in the modulation of the chemotaxis system; catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR [H]
COG id: COG1776
COG function: function code NT; Chemotaxis protein CheC, inhibitor of MCP methylation
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR008248 - InterPro: IPR000673 - InterPro: IPR001789 [H]
Pfam domain/function: PF01339 CheB_methylest; PF00072 Response_reg [H]
EC number: =3.1.1.61 [H]
Molecular weight: Translated: 36272; Mature: 36141
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTISVLICDDSAMARKQMARTLPKEWDVEITYATNGAEGLDAIRAGKGEVVFLDLNMPVM CEEEEEEECCHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHCCCCCEEEEECCCCCC DGYEVLQTVQQNDLPALIIVVSGDIQIKAHERVKALGALDFIQKPVSADAISNILQEYGI CCHHHHHHHHHCCCCEEEEEEECCEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCE LTLTQKDQAEDTPMIKVDMRDACQEIANVAMGRAADLLAKLLDVFVLLPIPNVNVLEVSE EEEECCCCCCCCCEEEEEHHHHHHHHHHHHHCHHHHHHHHHHHHHEEECCCCCCEEEHHH LTMALKATEESSTVSALCQGFIGAGVAGEALLLFHDSSFQDMAKLMGLANPEDISTEIEV HHEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCEEEE LIDTGNVLIGAFLNGISEQLDMKFSQAHPVVLGRHCTVNDLIHDNSEKWHRTLAMEINYR EEECCCCHHHHHHHHHHHHHCCHHCCCCCEEEECCCCHHHHHCCCCHHHHEEEEEEEEEE IENHNVQCDLLLLFTEDSIPTLSYKLGYLLD EECCCEEEEEEEEEECCCCCEEEEECCEECC >Mature Secondary Structure TISVLICDDSAMARKQMARTLPKEWDVEITYATNGAEGLDAIRAGKGEVVFLDLNMPVM EEEEEEECCHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHCCCCCEEEEECCCCCC DGYEVLQTVQQNDLPALIIVVSGDIQIKAHERVKALGALDFIQKPVSADAISNILQEYGI CCHHHHHHHHHCCCCEEEEEEECCEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCE LTLTQKDQAEDTPMIKVDMRDACQEIANVAMGRAADLLAKLLDVFVLLPIPNVNVLEVSE EEEECCCCCCCCCEEEEEHHHHHHHHHHHHHCHHHHHHHHHHHHHEEECCCCCCEEEHHH LTMALKATEESSTVSALCQGFIGAGVAGEALLLFHDSSFQDMAKLMGLANPEDISTEIEV HHEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCEEEE LIDTGNVLIGAFLNGISEQLDMKFSQAHPVVLGRHCTVNDLIHDNSEKWHRTLAMEINYR EEECCCCHHHHHHHHHHHHHCCHHCCCCCEEEECCCCHHHHHCCCCHHHHEEEEEEEEEE IENHNVQCDLLLLFTEDSIPTLSYKLGYLLD EECCCEEEEEEEEEECCCCCEEEEECCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA