| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
Click here to switch to the map view.
The map label for this gene is 117919016
Identifier: 117919016
GI number: 117919016
Start: 657267
End: 657392
Strand: Reverse
Name: 117919016
Synonym: Shewana3_0563
Alternate gene names: NA
Gene position: 657392-657267 (Counterclockwise)
Preceding gene: 117919023
Following gene: 117919014
Centisome position: 13.22
GC content: 40.48
Gene sequence:
>126_bases ATGCTAGCATTCTTTCGTGAAAACTTAGGATTAATCTTAGGGATAGTGATTTTCGGCGCAGTAATTTTGGGCGGGATTTA TTACGTAGAACACTCACTCGAGAGCCAAGAGCAGGTTATCCAATAA
Upstream 100 bases:
>100_bases AGAGTTATTTAAGATTAGCTTAAGTCAGTAAAACTATGATGTGCCCAGTGTAATACTGGCTAATAAGTCATTCTATTCAA CCCAGCAAAAGGCAACCCAA
Downstream 100 bases:
>100_bases CTCAGCCCTAGCCTAAACCAAGTTGAGCCTGTGCGATAACCCCTGCGCGGCTCGACTCGGTTAATCTAACGCCCTCACCT CTAGCGATACTTTTGCCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 41; Mature: 41
Protein sequence:
>41_residues MLAFFRENLGLILGIVIFGAVILGGIYYVEHSLESQEQVIQ
Sequences:
>Translated_41_residues MLAFFRENLGLILGIVIFGAVILGGIYYVEHSLESQEQVIQ >Mature_41_residues MLAFFRENLGLILGIVIFGAVILGGIYYVEHSLESQEQVIQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4581; Mature: 4581
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAFFRENLGLILGIVIFGAVILGGIYYVEHSLESQEQVIQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLAFFRENLGLILGIVIFGAVILGGIYYVEHSLESQEQVIQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA