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The map label for this gene is adrA [H]

Identifier: 117919023

GI number: 117919023

Start: 662313

End: 663287

Strand: Reverse

Name: adrA [H]

Synonym: Shewana3_0570

Alternate gene names: 117919023

Gene position: 663287-662313 (Counterclockwise)

Preceding gene: 117919024

Following gene: 117919016

Centisome position: 13.34

GC content: 48.1

Gene sequence:

>975_bases
ATGTCAAACGATCAAAGCGCAATGAACGAACTCCATTGGCTTATCGATATGGTGCAAACCATCGAAGTGGGTCTAGTGGT
ATTAGATCGCGATTATAATATCCAACTGTGGAACGGCTTTATGGAAAACCATAGCGGCGTATCCCCTAATTCGATTAAAG
GGCAAAACCTGTTCACCCGTTTTCCTGAGCTACCAGCGACTTGGTTAAAGCAAAAGATGGAATCGGTTTTTATGCTGAAA
AATCGAGCCTTTATCAGCTGGGAACAAAGACCCTACGTGTTTCAGTTTAAAAACTACCGCCCCATTACCGGACGGGCCGA
TTTTATGTACCAGAACGTGACACTGTTGCCTCTGGCCTCATTAACCGGAAAAATAACCCATATCAGCGTGATTATTTATG
ATGTCACCGACATCGCCGTCAACAAGCTACAGCTCAAGGCCGCCAACGAGCAGTTAGAACGCCTCAGCCAGACCGATGGC
CTGACACAGCTCCATAATCGCCGCCATTGGCAACAATGTTTAGAGCATGAGTTTGACCTCCACGCCCGTTATTCGGGGAT
GTCGAGCTTGGTCATGATTGACATAGACCATTTCAAAAGAATCAACGATACCTACGGCCATGTCGCGGGTGATAAGGTGA
TTCAGCATATCGCCCATATCCTAAGCCATTCATTAAGGGAGACCGATTGTGTCGGCCGCTATGGTGGTGAGGAGTTCGCT
GTGGTCATGCCCAATACTTGTGGCGCCGATGCCCTCAACTTTACCGAGCGTTTGCGGGAAAGAATTGCCGACTCCACCAT
AGTGTACGAAGGGCTGAAGATAAAAGTCACAGTAAGCCTAGGCGTGTGTGAAATCGGCAAACATATCACCAGCAGCTCTG
GCTGGATTTCTTGCTCAGACAAAGCCTTATACGAAGCCAAGCAAAAAGGACGTAACTGTAGCGTCCTGCACACCGCACAA
ACCAGTGGTTACTGA

Upstream 100 bases:

>100_bases
TGTTCAATGCGATTTGTTACTGCTATTTACCGAAGACTCTATTCCGACGCTCAGTTATAAGCTCGGTTACTTACTCGATT
AATCAGTTGGATTTTACCTT

Downstream 100 bases:

>100_bases
AACCAAAAAGCCCATCGATGATGGGCTTTTTGTTACTGAAATCTCAATGGTCGCGAATTAGTGCGGGAAACCGTCATCTT
CTTCGTCGTCACCTTCTTCG

Product: diguanylate cyclase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 323

Protein sequence:

>324_residues
MSNDQSAMNELHWLIDMVQTIEVGLVVLDRDYNIQLWNGFMENHSGVSPNSIKGQNLFTRFPELPATWLKQKMESVFMLK
NRAFISWEQRPYVFQFKNYRPITGRADFMYQNVTLLPLASLTGKITHISVIIYDVTDIAVNKLQLKAANEQLERLSQTDG
LTQLHNRRHWQQCLEHEFDLHARYSGMSSLVMIDIDHFKRINDTYGHVAGDKVIQHIAHILSHSLRETDCVGRYGGEEFA
VVMPNTCGADALNFTERLRERIADSTIVYEGLKIKVTVSLGVCEIGKHITSSSGWISCSDKALYEAKQKGRNCSVLHTAQ
TSGY

Sequences:

>Translated_324_residues
MSNDQSAMNELHWLIDMVQTIEVGLVVLDRDYNIQLWNGFMENHSGVSPNSIKGQNLFTRFPELPATWLKQKMESVFMLK
NRAFISWEQRPYVFQFKNYRPITGRADFMYQNVTLLPLASLTGKITHISVIIYDVTDIAVNKLQLKAANEQLERLSQTDG
LTQLHNRRHWQQCLEHEFDLHARYSGMSSLVMIDIDHFKRINDTYGHVAGDKVIQHIAHILSHSLRETDCVGRYGGEEFA
VVMPNTCGADALNFTERLRERIADSTIVYEGLKIKVTVSLGVCEIGKHITSSSGWISCSDKALYEAKQKGRNCSVLHTAQ
TSGY
>Mature_323_residues
SNDQSAMNELHWLIDMVQTIEVGLVVLDRDYNIQLWNGFMENHSGVSPNSIKGQNLFTRFPELPATWLKQKMESVFMLKN
RAFISWEQRPYVFQFKNYRPITGRADFMYQNVTLLPLASLTGKITHISVIIYDVTDIAVNKLQLKAANEQLERLSQTDGL
TQLHNRRHWQQCLEHEFDLHARYSGMSSLVMIDIDHFKRINDTYGHVAGDKVIQHIAHILSHSLRETDCVGRYGGEEFAV
VMPNTCGADALNFTERLRERIADSTIVYEGLKIKVTVSLGVCEIGKHITSSSGWISCSDKALYEAKQKGRNCSVLHTAQT
SGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

Organism=Escherichia coli, GI1786584, Length=169, Percent_Identity=37.2781065088757, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI87082007, Length=216, Percent_Identity=34.2592592592593, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI145693134, Length=156, Percent_Identity=35.2564102564103, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1787541, Length=289, Percent_Identity=26.643598615917, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI87081881, Length=182, Percent_Identity=37.3626373626374, Blast_Score=98, Evalue=6e-22,
Organism=Escherichia coli, GI1787262, Length=207, Percent_Identity=31.4009661835749, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1788381, Length=215, Percent_Identity=28.8372093023256, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI87081977, Length=183, Percent_Identity=33.3333333333333, Blast_Score=89, Evalue=5e-19,
Organism=Escherichia coli, GI1787802, Length=189, Percent_Identity=29.1005291005291, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1787816, Length=159, Percent_Identity=34.5911949685535, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1788085, Length=200, Percent_Identity=30.5, Blast_Score=82, Evalue=7e-17,
Organism=Escherichia coli, GI87081974, Length=159, Percent_Identity=27.0440251572327, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1788956, Length=169, Percent_Identity=28.9940828402367, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR007894 [H]

Pfam domain/function: PF00990 GGDEF; PF05230 MASE2 [H]

EC number: NA

Molecular weight: Translated: 36942; Mature: 36810

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNDQSAMNELHWLIDMVQTIEVGLVVLDRDYNIQLWNGFMENHSGVSPNSIKGQNLFTR
CCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCEEEEECHHHCCCCCCCCCCCCCHHHHH
FPELPATWLKQKMESVFMLKNRAFISWEQRPYVFQFKNYRPITGRADFMYQNVTLLPLAS
CCCCCHHHHHHHHHHHHHHHCCEEEEECCCCEEEEECCCCCCCCCCHHEECCEEEEEHHH
LTGKITHISVIIYDVTDIAVNKLQLKAANEQLERLSQTDGLTQLHNRRHWQQCLEHEFDL
HCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC
HARYSGMSSLVMIDIDHFKRINDTYGHVAGDKVIQHIAHILSHSLRETDCVGRYGGEEFA
HHHHCCCCEEEEEEHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
VVMPNTCGADALNFTERLRERIADSTIVYEGLKIKVTVSLGVCEIGKHITSSSGWISCSD
EECCCCCCCHHHHHHHHHHHHHCCCEEEEECEEEEEEEEECHHHHHHHHCCCCCEEEECH
KALYEAKQKGRNCSVLHTAQTSGY
HHHHHHHHCCCCCEEEEECCCCCC
>Mature Secondary Structure 
SNDQSAMNELHWLIDMVQTIEVGLVVLDRDYNIQLWNGFMENHSGVSPNSIKGQNLFTR
CCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCEEEEECHHHCCCCCCCCCCCCCHHHHH
FPELPATWLKQKMESVFMLKNRAFISWEQRPYVFQFKNYRPITGRADFMYQNVTLLPLAS
CCCCCHHHHHHHHHHHHHHHCCEEEEECCCCEEEEECCCCCCCCCCHHEECCEEEEEHHH
LTGKITHISVIIYDVTDIAVNKLQLKAANEQLERLSQTDGLTQLHNRRHWQQCLEHEFDL
HCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC
HARYSGMSSLVMIDIDHFKRINDTYGHVAGDKVIQHIAHILSHSLRETDCVGRYGGEEFA
HHHHCCCCEEEEEEHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
VVMPNTCGADALNFTERLRERIADSTIVYEGLKIKVTVSLGVCEIGKHITSSSGWISCSD
EECCCCCCCHHHHHHHHHHHHHCCCEEEEECEEEEEEEEECHHHHHHHHCCCCCEEEECH
KALYEAKQKGRNCSVLHTAQTSGY
HHHHHHHHCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]