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The map label for this gene is 117918923

Identifier: 117918923

GI number: 117918923

Start: 543640

End: 544560

Strand: Reverse

Name: 117918923

Synonym: Shewana3_0468

Alternate gene names: NA

Gene position: 544560-543640 (Counterclockwise)

Preceding gene: 117918926

Following gene: 117918922

Centisome position: 10.95

GC content: 51.79

Gene sequence:

>921_bases
ATGCATTATTGTTTTAACGCTTTTGTGTTGGATACCCAGAACCGAACCCTGTTCTGCAACAACCAAAGGCTCCACTGCGA
CGAGCGCGTTATCCTGTTACTCGCAAAGCTAATCGACGCCTATCCCGCCCATTGCGATCAGGCCTGCTTGCTCGAACATA
TTTGGCCCAATACCGTGGTGAGTAGTTGGTCCGTCGCAAGATTAATCTCAGATACCCGCAAATTATTCGAGGTGGAGGGC
CTTAAGGTACCCATTATTCAAACCTTGCATGGCCGAGGGTATCGGCTCTCCCCCGATGTCGCCGCCATTATTCGCTCCGA
TGCCGTCGCTAACAGTTTTGCCGCTCAAGACCACTCACTCGTAATAACAGATAACGCCACCAGCGCAGCCAACTCGAATA
CACTTCAACCCGCGCAAAAAAAGCCCTATTTCACCCTGCCGGGATTAATCTTGATTGGTATCTTGTCGAGCGCTGTGCTT
GCCCTGCTCTATCACAATCAAGCTGAACGTAACGGCCAATTAGTGTTGGCCGAGCCGCAAAACGTAAAAGCACGCATATT
GTGGGTCGATGATCACCCAGAAAATAATCAGGCCGAGCGCCAGTTTTTAGAGCAAAAAAAGATTGGGGTTTACACCACCA
AAACCAGCAGCGATGCACTCACACTGCTGAGTTTGTATAGCTACGATGCCATTATTACCGACATGGGCCGAGGCACCGAT
CCCCTCGCCGGTCTGAAACTGATGCAGGCAATCCGCGAGCGCGGCATCAGCACGCCCATTTACCTCTACACCATCATGCC
CTCTGAGGCGCTAAGGCAAAAAGCCCGGGAACATGGCGCGCAGGACATCGCCGTCGAAGCCGAAGACTTATATCAACACT
TGATGCCACTCATCCGTTATGCCGACGAAGGCGTGGAGTAA

Upstream 100 bases:

>100_bases
AATCACAGACAATTCATTTGACTCGAGGGCCAAGTTTGGCTTGAATTGATTGATACAATTAATTAACAACTAAAGTATGA
CTCGATGCCAAGGGACCTGA

Downstream 100 bases:

>100_bases
AGCCGCGCTCAACCTCAGCAAATTTTGCTTCAATCTATTGATATTATTCACTTTCAAAAACATTCAATAAGTTTCAAAGA
CAAAATCCCTCCCGAGGATT

Product: putative transcriptional regulator, CadC

Products: NA

Alternate protein names: Response Regulator Receiver Protein; Response Regulator Receiver

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MHYCFNAFVLDTQNRTLFCNNQRLHCDERVILLLAKLIDAYPAHCDQACLLEHIWPNTVVSSWSVARLISDTRKLFEVEG
LKVPIIQTLHGRGYRLSPDVAAIIRSDAVANSFAAQDHSLVITDNATSAANSNTLQPAQKKPYFTLPGLILIGILSSAVL
ALLYHNQAERNGQLVLAEPQNVKARILWVDDHPENNQAERQFLEQKKIGVYTTKTSSDALTLLSLYSYDAIITDMGRGTD
PLAGLKLMQAIRERGISTPIYLYTIMPSEALRQKAREHGAQDIAVEAEDLYQHLMPLIRYADEGVE

Sequences:

>Translated_306_residues
MHYCFNAFVLDTQNRTLFCNNQRLHCDERVILLLAKLIDAYPAHCDQACLLEHIWPNTVVSSWSVARLISDTRKLFEVEG
LKVPIIQTLHGRGYRLSPDVAAIIRSDAVANSFAAQDHSLVITDNATSAANSNTLQPAQKKPYFTLPGLILIGILSSAVL
ALLYHNQAERNGQLVLAEPQNVKARILWVDDHPENNQAERQFLEQKKIGVYTTKTSSDALTLLSLYSYDAIITDMGRGTD
PLAGLKLMQAIRERGISTPIYLYTIMPSEALRQKAREHGAQDIAVEAEDLYQHLMPLIRYADEGVE
>Mature_306_residues
MHYCFNAFVLDTQNRTLFCNNQRLHCDERVILLLAKLIDAYPAHCDQACLLEHIWPNTVVSSWSVARLISDTRKLFEVEG
LKVPIIQTLHGRGYRLSPDVAAIIRSDAVANSFAAQDHSLVITDNATSAANSNTLQPAQKKPYFTLPGLILIGILSSAVL
ALLYHNQAERNGQLVLAEPQNVKARILWVDDHPENNQAERQFLEQKKIGVYTTKTSSDALTLLSLYSYDAIITDMGRGTD
PLAGLKLMQAIRERGISTPIYLYTIMPSEALRQKAREHGAQDIAVEAEDLYQHLMPLIRYADEGVE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34240; Mature: 34240

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHYCFNAFVLDTQNRTLFCNNQRLHCDERVILLLAKLIDAYPAHCDQACLLEHIWPNTVV
CCEEEEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHH
SSWSVARLISDTRKLFEVEGLKVPIIQTLHGRGYRLSPDVAAIIRSDAVANSFAAQDHSL
HHHHHHHHHHHHHHHHHHCCCEECHHHHHCCCCEEECCHHHHHHHHHHHHHHHHCCCCCE
VITDNATSAANSNTLQPAQKKPYFTLPGLILIGILSSAVLALLYHNQAERNGQLVLAEPQ
EEECCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCC
NVKARILWVDDHPENNQAERQFLEQKKIGVYTTKTSSDALTLLSLYSYDAIITDMGRGTD
CCEEEEEEEECCCCCCHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCC
PLAGLKLMQAIRERGISTPIYLYTIMPSEALRQKAREHGAQDIAVEAEDLYQHLMPLIRY
HHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHH
ADEGVE
HCCCCC
>Mature Secondary Structure
MHYCFNAFVLDTQNRTLFCNNQRLHCDERVILLLAKLIDAYPAHCDQACLLEHIWPNTVV
CCEEEEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHH
SSWSVARLISDTRKLFEVEGLKVPIIQTLHGRGYRLSPDVAAIIRSDAVANSFAAQDHSL
HHHHHHHHHHHHHHHHHHCCCEECHHHHHCCCCEEECCHHHHHHHHHHHHHHHHCCCCCE
VITDNATSAANSNTLQPAQKKPYFTLPGLILIGILSSAVLALLYHNQAERNGQLVLAEPQ
EEECCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCC
NVKARILWVDDHPENNQAERQFLEQKKIGVYTTKTSSDALTLLSLYSYDAIITDMGRGTD
CCEEEEEEEECCCCCCHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCC
PLAGLKLMQAIRERGISTPIYLYTIMPSEALRQKAREHGAQDIAVEAEDLYQHLMPLIRY
HHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHH
ADEGVE
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA