Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

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The map label for this gene is 117918922

Identifier: 117918922

GI number: 117918922

Start: 541429

End: 543396

Strand: Reverse

Name: 117918922

Synonym: Shewana3_0467

Alternate gene names: NA

Gene position: 543396-541429 (Counterclockwise)

Preceding gene: 117918923

Following gene: 117918921

Centisome position: 10.93

GC content: 51.27

Gene sequence:

>1968_bases
ATGAAGCCAATCTATCGACTCACGGTTCCCATTCTCTTAGGTCTCACGCTCGGCGCCTGTGGCGGCAGTGATGATGACGA
TGAAGATCCTAGCCCCATTGAATCCCAGCAATTTGCCATTAAAGGGACAGTAAAAGGGCTGACCAACACCCTAAAACTCA
CCCTACAAACCAATGGCCAGACAGTAGAAACGCTTTCTGTTCAAAGTGATGGCACAGATAAGGCCTTTGCATTTTCGAAT
ATGCAGAATGAAGGCGTTAGCTTTGCCATTACCGTCAATACGCAGCCAACGGCACAAACCTGTACCGTCGCTAATGGCAG
CGGCACCTTAAGCCAGAGCAATGCCGAAACCGCCCTCGTCACCTGTGAAACCAATGCTAATGCCGAATTAACCGGGATCT
TTAGGGATAGCCCAGTTGCCGGGATCCATTATCAAACCGACAGCCAAACCGATGGCACCACCAGCGATATTGGTGAGTTT
CAATACTTACAGGGGGAACAAGTCACCTTTTCGGTCGGCGCGATTCAGTTTCCCAGCACAGCTGCCAGCGCACTCGTCAC
TCCCACCGAAATTGCAGCGGGCAATGAGGTCACAAAGGTAAATATCCTGCAATTGCTGCAGACTTTAGATCAGGACTGCG
ATGTCGAAAATGGCATTCAGATCAAAAGCTCACACCATGATCTGCTCGCCAATACCGTACTGGATATCAGCAGTGCCGAT
TTTGACTCCCAACTCAACACCGCCTTTGCCAGCCTCGGTTCGGGTTTGAGTCTGATCAGCGAAGCCCAAGCCCTTAACCA
TTTCGATACCTCCAATCGTAATCTGCTGCTAGGTAGCTGGCTGCTGTCGGAAGGAGAAGGTCAAAGCAACATACTGACCT
TTATCGACCATAGCCGTTATATATTGATCCACGAGCATGCGGGTGATGGCGATCAGGGTGCAGCCTCGGTCGAATACGGA
AATTACACTTGGGATAGCGTGACGGGTAGTTTCAGCGTGAGTCTCATCGCTCAATCCGATGGTTCCGGTGGCCTGTACGA
TGAAAGTAGTGTCGTTAACAAGGCGATGGTAAGCCTCAATACCCTCACACTGAGCCTCACAGACAATGGTTCGTCAAGCA
TCACACTCACGCGTATCGAAGATGCTAGCGATGCGTTAATCGGCACCTGGCATGTGTACGATCCCGAAACCGATAACGAC
AGCTTTGTGACTTTCCTGCCCAATCAAGCCTATGCCATTGTGCATACCGCCAATTCCGACAGCTATGAGGGGCAATCACC
CCAAGCGCAATCGGGGGAATTTGGTCATTACGTCAAAGATGCCAGTGGCTATAAGTTTACCGCCAGTGTCGAGTCCGACG
GCCCTAATGGCCTCTATGATGCCCAGTCAGCCGACGCCCATCAGTTTTCGTCCATCAGCACCAGCCAATGGGGCGAGATG
ATGGCCACAGAAAATGGCCCAGACGGCGGTACTTTCACCTTAGATAAGGTCGGCAGTTTTGTGACAGAGTTAGTCGATAA
GCCTTCCGCCGCAGGTACCAGCCTTGGACGCATCACCTCGGTGCGGGATATCGAAGGCTTTAGCTACGACGCCACAGTCA
ATCGCCTGCTGCAATTTGACGTAACCTTTGCCACGGACACGCAAAACCGCTGCACCACAGAGTTCGCCAATGGCCAATGC
GGCGCGCGTTACAACATGCTGGTGCAGAATGTATCCGAGAATGATATGGGGGATGTGATTGGCGAAATCAGCCTGAACGA
AGTCACTAGCAATGCCCAAGTAAACAGCGATTTTTATATGACGACCGCTGGCACACTGCACTTTGCCTTTAGTGGCAGTC
AGACGATGACCATCAGTCCTTTGTTAGGCAAATCTTGCCAAGGTAATCAACGCGCTTTAGTGAGCTTAACCGATACCAGC
AGTAACCAATCGCTTTGGTTAGTCGAGTTAACCCCAGCCGCCCTATAG

Upstream 100 bases:

>100_bases
GCTATCGCCCGAGCCCCAATGATGACTAACGACCATCCCGCTATGTGGGATAGCGAGTTGTTGCTGATATTTGCTCAGTA
GCCTAAAAGGAATTTACATA

Downstream 100 bases:

>100_bases
CTAACGCTATCTTCCCTTTGCCGGGCTATGTTCTTCCGTAGTCCGGCATTTTTTTATTCTAAAAAACCAATAAGTCCAGC
GAACACAGCTATTGCCTATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 655; Mature: 655

Protein sequence:

>655_residues
MKPIYRLTVPILLGLTLGACGGSDDDDEDPSPIESQQFAIKGTVKGLTNTLKLTLQTNGQTVETLSVQSDGTDKAFAFSN
MQNEGVSFAITVNTQPTAQTCTVANGSGTLSQSNAETALVTCETNANAELTGIFRDSPVAGIHYQTDSQTDGTTSDIGEF
QYLQGEQVTFSVGAIQFPSTAASALVTPTEIAAGNEVTKVNILQLLQTLDQDCDVENGIQIKSSHHDLLANTVLDISSAD
FDSQLNTAFASLGSGLSLISEAQALNHFDTSNRNLLLGSWLLSEGEGQSNILTFIDHSRYILIHEHAGDGDQGAASVEYG
NYTWDSVTGSFSVSLIAQSDGSGGLYDESSVVNKAMVSLNTLTLSLTDNGSSSITLTRIEDASDALIGTWHVYDPETDND
SFVTFLPNQAYAIVHTANSDSYEGQSPQAQSGEFGHYVKDASGYKFTASVESDGPNGLYDAQSADAHQFSSISTSQWGEM
MATENGPDGGTFTLDKVGSFVTELVDKPSAAGTSLGRITSVRDIEGFSYDATVNRLLQFDVTFATDTQNRCTTEFANGQC
GARYNMLVQNVSENDMGDVIGEISLNEVTSNAQVNSDFYMTTAGTLHFAFSGSQTMTISPLLGKSCQGNQRALVSLTDTS
SNQSLWLVELTPAAL

Sequences:

>Translated_655_residues
MKPIYRLTVPILLGLTLGACGGSDDDDEDPSPIESQQFAIKGTVKGLTNTLKLTLQTNGQTVETLSVQSDGTDKAFAFSN
MQNEGVSFAITVNTQPTAQTCTVANGSGTLSQSNAETALVTCETNANAELTGIFRDSPVAGIHYQTDSQTDGTTSDIGEF
QYLQGEQVTFSVGAIQFPSTAASALVTPTEIAAGNEVTKVNILQLLQTLDQDCDVENGIQIKSSHHDLLANTVLDISSAD
FDSQLNTAFASLGSGLSLISEAQALNHFDTSNRNLLLGSWLLSEGEGQSNILTFIDHSRYILIHEHAGDGDQGAASVEYG
NYTWDSVTGSFSVSLIAQSDGSGGLYDESSVVNKAMVSLNTLTLSLTDNGSSSITLTRIEDASDALIGTWHVYDPETDND
SFVTFLPNQAYAIVHTANSDSYEGQSPQAQSGEFGHYVKDASGYKFTASVESDGPNGLYDAQSADAHQFSSISTSQWGEM
MATENGPDGGTFTLDKVGSFVTELVDKPSAAGTSLGRITSVRDIEGFSYDATVNRLLQFDVTFATDTQNRCTTEFANGQC
GARYNMLVQNVSENDMGDVIGEISLNEVTSNAQVNSDFYMTTAGTLHFAFSGSQTMTISPLLGKSCQGNQRALVSLTDTS
SNQSLWLVELTPAAL
>Mature_655_residues
MKPIYRLTVPILLGLTLGACGGSDDDDEDPSPIESQQFAIKGTVKGLTNTLKLTLQTNGQTVETLSVQSDGTDKAFAFSN
MQNEGVSFAITVNTQPTAQTCTVANGSGTLSQSNAETALVTCETNANAELTGIFRDSPVAGIHYQTDSQTDGTTSDIGEF
QYLQGEQVTFSVGAIQFPSTAASALVTPTEIAAGNEVTKVNILQLLQTLDQDCDVENGIQIKSSHHDLLANTVLDISSAD
FDSQLNTAFASLGSGLSLISEAQALNHFDTSNRNLLLGSWLLSEGEGQSNILTFIDHSRYILIHEHAGDGDQGAASVEYG
NYTWDSVTGSFSVSLIAQSDGSGGLYDESSVVNKAMVSLNTLTLSLTDNGSSSITLTRIEDASDALIGTWHVYDPETDND
SFVTFLPNQAYAIVHTANSDSYEGQSPQAQSGEFGHYVKDASGYKFTASVESDGPNGLYDAQSADAHQFSSISTSQWGEM
MATENGPDGGTFTLDKVGSFVTELVDKPSAAGTSLGRITSVRDIEGFSYDATVNRLLQFDVTFATDTQNRCTTEFANGQC
GARYNMLVQNVSENDMGDVIGEISLNEVTSNAQVNSDFYMTTAGTLHFAFSGSQTMTISPLLGKSCQGNQRALVSLTDTS
SNQSLWLVELTPAAL

Specific function: Unknown

COG id: COG3391

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69540; Mature: 69540

Theoretical pI: Translated: 3.91; Mature: 3.91

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPIYRLTVPILLGLTLGACGGSDDDDEDPSPIESQQFAIKGTVKGLTNTLKLTLQTNGQ
CCCHHEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEHHCCCEEEEEEEECCCC
TVETLSVQSDGTDKAFAFSNMQNEGVSFAITVNTQPTAQTCTVANGSGTLSQSNAETALV
EEEEEEECCCCCCCEEEECCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCCEEEE
TCETNANAELTGIFRDSPVAGIHYQTDSQTDGTTSDIGEFQYLQGEQVTFSVGAIQFPST
EEECCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCEEEECCCEEEEEEEEEECCCC
AASALVTPTEIAAGNEVTKVNILQLLQTLDQDCDVENGIQIKSSHHDLLANTVLDISSAD
HHHHEECCHHHCCCCCEEEHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHEECCCCC
FDSQLNTAFASLGSGLSLISEAQALNHFDTSNRNLLLGSWLLSEGEGQSNILTFIDHSRY
CCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCEEEEEECCEE
ILIHEHAGDGDQGAASVEYGNYTWDSVTGSFSVSLIAQSDGSGGLYDESSVVNKAMVSLN
EEEEECCCCCCCCCEEEECCCEEECCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHEEEE
TLTLSLTDNGSSSITLTRIEDASDALIGTWHVYDPETDNDSFVTFLPNQAYAIVHTANSD
EEEEEEECCCCCEEEEEEECCCCCCEEEEEEEECCCCCCCCEEEECCCCEEEEEEECCCC
SYEGQSPQAQSGEFGHYVKDASGYKFTASVESDGPNGLYDAQSADAHQFSSISTSQWGEM
CCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCHHHCCCCHHHHHHH
MATENGPDGGTFTLDKVGSFVTELVDKPSAAGTSLGRITSVRDIEGFSYDATVNRLLQFD
EECCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEHHHHHEEEEEE
VTFATDTQNRCTTEFANGQCGARYNMLVQNVSENDMGDVIGEISLNEVTSNAQVNSDFYM
EEEEECCCCCCEEECCCCCCCCEEEEHEECCCCCCHHHHHCCEEHHHCCCCCEECCCEEE
TTAGTLHFAFSGSQTMTISPLLGKSCQGNQRALVSLTDTSSNQSLWLVELTPAAL
EECCEEEEEECCCCEEEECHHHCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCC
>Mature Secondary Structure
MKPIYRLTVPILLGLTLGACGGSDDDDEDPSPIESQQFAIKGTVKGLTNTLKLTLQTNGQ
CCCHHEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEHHCCCEEEEEEEECCCC
TVETLSVQSDGTDKAFAFSNMQNEGVSFAITVNTQPTAQTCTVANGSGTLSQSNAETALV
EEEEEEECCCCCCCEEEECCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCCEEEE
TCETNANAELTGIFRDSPVAGIHYQTDSQTDGTTSDIGEFQYLQGEQVTFSVGAIQFPST
EEECCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCEEEECCCEEEEEEEEEECCCC
AASALVTPTEIAAGNEVTKVNILQLLQTLDQDCDVENGIQIKSSHHDLLANTVLDISSAD
HHHHEECCHHHCCCCCEEEHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHEECCCCC
FDSQLNTAFASLGSGLSLISEAQALNHFDTSNRNLLLGSWLLSEGEGQSNILTFIDHSRY
CCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCEEEEEECCEE
ILIHEHAGDGDQGAASVEYGNYTWDSVTGSFSVSLIAQSDGSGGLYDESSVVNKAMVSLN
EEEEECCCCCCCCCEEEECCCEEECCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHEEEE
TLTLSLTDNGSSSITLTRIEDASDALIGTWHVYDPETDNDSFVTFLPNQAYAIVHTANSD
EEEEEEECCCCCEEEEEEECCCCCCEEEEEEEECCCCCCCCEEEECCCCEEEEEEECCCC
SYEGQSPQAQSGEFGHYVKDASGYKFTASVESDGPNGLYDAQSADAHQFSSISTSQWGEM
CCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCHHHCCCCHHHHHHH
MATENGPDGGTFTLDKVGSFVTELVDKPSAAGTSLGRITSVRDIEGFSYDATVNRLLQFD
EECCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEHHHHHEEEEEE
VTFATDTQNRCTTEFANGQCGARYNMLVQNVSENDMGDVIGEISLNEVTSNAQVNSDFYM
EEEEECCCCCCEEECCCCCCCCEEEEHEECCCCCCHHHHHCCEEHHHCCCCCEECCCEEE
TTAGTLHFAFSGSQTMTISPLLGKSCQGNQRALVSLTDTSSNQSLWLVELTPAAL
EECCEEEEEECCCCEEEECHHHCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA