| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117918911
Identifier: 117918911
GI number: 117918911
Start: 529962
End: 530360
Strand: Reverse
Name: 117918911
Synonym: Shewana3_0455
Alternate gene names: NA
Gene position: 530360-529962 (Counterclockwise)
Preceding gene: 117918912
Following gene: 117918908
Centisome position: 10.67
GC content: 53.38
Gene sequence:
>399_bases ATGCTAGGTCTATGTTTAGGCCTAGCCGGCACACTGTGGGCACAAGTGCCTACAGAGCAGTTCACCCTAGCGTGGAACCA CAGCATAGAAAAAATCCGCTGGGAAGAAGACTATCGAGTTACCTCACAAGGATTACGGCTCATAGAAGCCAGAGTCAAAG GTACGGGGGCGGGAATGGAAATCCCCGATAATGCAGTGTTTAGTAATGGCAGTTGGCATTATCAACCTAAGCTGCCCGTG CTGCCGAGATTACGCTTAGGGCGCACCCCCGAGGCGGGGGATTTTGAGCTGTGCTTCACTCAGGCTTCAGGAGAGACGCA ATGCCAAGCCATGAGTCATTGGATTGGTCAGCCGAACAAACAAGATGCCGCCGTTGAGGTGTGGGGCTGTCAGCTGTGA
Upstream 100 bases:
>100_bases GCTACTCTTTATCGTGCAGCACAGCCTAAGAGTGCGCAAACTGAAACGTCTTGCGGAGCAGGGGTAAGGTTTTGAACTTA TGCAAAGGTAAGGCAATAAG
Downstream 100 bases:
>100_bases ATATCACTGTAGGAAGGAGGACGCGCAAGCACGGCGCGTCCGCCGCCCATTAGCGGTTAATACTGCTCTCATTCCGAGAG AAGCTGTAGCCGTTTTTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 132; Mature: 132
Protein sequence:
>132_residues MLGLCLGLAGTLWAQVPTEQFTLAWNHSIEKIRWEEDYRVTSQGLRLIEARVKGTGAGMEIPDNAVFSNGSWHYQPKLPV LPRLRLGRTPEAGDFELCFTQASGETQCQAMSHWIGQPNKQDAAVEVWGCQL
Sequences:
>Translated_132_residues MLGLCLGLAGTLWAQVPTEQFTLAWNHSIEKIRWEEDYRVTSQGLRLIEARVKGTGAGMEIPDNAVFSNGSWHYQPKLPV LPRLRLGRTPEAGDFELCFTQASGETQCQAMSHWIGQPNKQDAAVEVWGCQL >Mature_132_residues MLGLCLGLAGTLWAQVPTEQFTLAWNHSIEKIRWEEDYRVTSQGLRLIEARVKGTGAGMEIPDNAVFSNGSWHYQPKLPV LPRLRLGRTPEAGDFELCFTQASGETQCQAMSHWIGQPNKQDAAVEVWGCQL
Specific function: Unknown
COG id: COG4729
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14742; Mature: 14742
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGLCLGLAGTLWAQVPTEQFTLAWNHSIEKIRWEEDYRVTSQGLRLIEARVKGTGAGME CCCCHHHHHHHHHHCCCCCCEEEEECCCCEEEECCCCCEEHHHHHHEEEHHHCCCCCCCC IPDNAVFSNGSWHYQPKLPVLPRLRLGRTPEAGDFELCFTQASGETQCQAMSHWIGQPNK CCCCCEECCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCC QDAAVEVWGCQL CCCEEEEEEECC >Mature Secondary Structure MLGLCLGLAGTLWAQVPTEQFTLAWNHSIEKIRWEEDYRVTSQGLRLIEARVKGTGAGME CCCCHHHHHHHHHHCCCCCCEEEEECCCCEEEECCCCCEEHHHHHHEEEHHHCCCCCCCC IPDNAVFSNGSWHYQPKLPVLPRLRLGRTPEAGDFELCFTQASGETQCQAMSHWIGQPNK CCCCCEECCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCC QDAAVEVWGCQL CCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA