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The map label for this gene is yniC [H]

Identifier: 117918889

GI number: 117918889

Start: 500896

End: 501552

Strand: Reverse

Name: yniC [H]

Synonym: Shewana3_0432

Alternate gene names: 117918889

Gene position: 501552-500896 (Counterclockwise)

Preceding gene: 117918891

Following gene: 117918879

Centisome position: 10.09

GC content: 50.84

Gene sequence:

>657_bases
ATGACATCCCTTAGTATTCAAGCTGTTATCTTTGATATGGATGGTGTGTTAATCGATTCAGAACCCCTTTGGCAACGGGT
TGAGTATGAAGTCTTATCGGCACTTGGCGTGCCCGTCACTATCGAAACGATTCAACAAACCACAGGTTTACGTATCGACC
AATGTGTCGACTATTGGTATCACAAAGCACCTTGGGCCGATTACGACAATGCCAAGGTCAGCACCGCCATCGTCGATAAA
GTCGCAGAGGAAATCCTGCGAACGGGCGAAGCCATGCAAGGCGTTCAACAAGCCATTGATTACTGCCAAGCTAAAGGCTT
AAAGATAGGCCTAGCCACCTCTTCTTTTTACACCATTATCGAAGCCGTACTCAGTAAACTCGGCCTAAGCGATAAGTTTA
TGGCGGTACAATCCGCCGAAGGTCTCACCTATGGCAAACCCCATCCCGAGGTGTACTTAAATTGCGCCGCCGCGTTAGGA
GTCGACCCGCGTTATTGCCTCGCGATTGAAGACTCTTTCAATGGTCTTATCGCCGCCCGCGCTGCCAATATGCAGACCGT
CGCCATTCCCGCACCGGAGCAACGCGGGCAGGCCAAATGGGTTGTCGCCCATCACCAAGCCGACAGCTTGTTAGATTTAC
CGGCTATCTTGGGCTAA

Upstream 100 bases:

>100_bases
AAACTTTGTGCTTTTAGACTTTGAAGATGCAGAGCTTAACCATACACTCAAGTTCCCAGAGCATAGCGCTTAGTAATCCT
TCCCATCCCTTGGAGTAGTA

Downstream 100 bases:

>100_bases
TCACAGCAACAATTGACGCAAATAAAAAAGCCAGACATCCGTCTGGCTTTTTCATTTTCATCCTATGGATTACCAGATTT
TTACGCGCTCTTCTGGTTTT

Product: 2-deoxyglucose-6-phosphatase

Products: glycerol; phosphate

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MTSLSIQAVIFDMDGVLIDSEPLWQRVEYEVLSALGVPVTIETIQQTTGLRIDQCVDYWYHKAPWADYDNAKVSTAIVDK
VAEEILRTGEAMQGVQQAIDYCQAKGLKIGLATSSFYTIIEAVLSKLGLSDKFMAVQSAEGLTYGKPHPEVYLNCAAALG
VDPRYCLAIEDSFNGLIAARAANMQTVAIPAPEQRGQAKWVVAHHQADSLLDLPAILG

Sequences:

>Translated_218_residues
MTSLSIQAVIFDMDGVLIDSEPLWQRVEYEVLSALGVPVTIETIQQTTGLRIDQCVDYWYHKAPWADYDNAKVSTAIVDK
VAEEILRTGEAMQGVQQAIDYCQAKGLKIGLATSSFYTIIEAVLSKLGLSDKFMAVQSAEGLTYGKPHPEVYLNCAAALG
VDPRYCLAIEDSFNGLIAARAANMQTVAIPAPEQRGQAKWVVAHHQADSLLDLPAILG
>Mature_217_residues
TSLSIQAVIFDMDGVLIDSEPLWQRVEYEVLSALGVPVTIETIQQTTGLRIDQCVDYWYHKAPWADYDNAKVSTAIVDKV
AEEILRTGEAMQGVQQAIDYCQAKGLKIGLATSSFYTIIEAVLSKLGLSDKFMAVQSAEGLTYGKPHPEVYLNCAAALGV
DPRYCLAIEDSFNGLIAARAANMQTVAIPAPEQRGQAKWVVAHHQADSLLDLPAILG

Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates 2-deoxyglucose 6-phosphate and mannose 6- phosphate [H]

COG id: COG0637

COG function: function code R; Predicted phosphatase/phosphohexomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]

Homologues:

Organism=Escherichia coli, GI1788021, Length=215, Percent_Identity=44.6511627906977, Blast_Score=198, Evalue=2e-52,
Organism=Escherichia coli, GI1789046, Length=184, Percent_Identity=31.5217391304348, Blast_Score=84, Evalue=7e-18,
Organism=Escherichia coli, GI1787576, Length=198, Percent_Identity=26.7676767676768, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1789787, Length=204, Percent_Identity=26.9607843137255, Blast_Score=62, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17554716, Length=193, Percent_Identity=25.3886010362694, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI17137324, Length=208, Percent_Identity=28.3653846153846, Blast_Score=85, Evalue=4e-17,
Organism=Drosophila melanogaster, GI116008157, Length=216, Percent_Identity=26.8518518518519, Blast_Score=77, Evalue=6e-15,
Organism=Drosophila melanogaster, GI20129151, Length=205, Percent_Identity=28.780487804878, Blast_Score=69, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006402
- InterPro:   IPR005833
- InterPro:   IPR023198 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: 3.1.3.21

Molecular weight: Translated: 23730; Mature: 23599

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSLSIQAVIFDMDGVLIDSEPLWQRVEYEVLSALGVPVTIETIQQTTGLRIDQCVDYWY
CCCCEEEEEEEECCCEEECCCHHHHHHHHHHHHHCCCCEEHHHHHHHHCCCHHHHHHHHH
HKAPWADYDNAKVSTAIVDKVAEEILRTGEAMQGVQQAIDYCQAKGLKIGLATSSFYTII
HCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHH
EAVLSKLGLSDKFMAVQSAEGLTYGKPHPEVYLNCAAALGVDPRYCLAIEDSFNGLIAAR
HHHHHHCCCCCHHEEEECCCCCCCCCCCCCEEEEEHHHHCCCCEEEEEEECCCCCEEEEE
AANMQTVAIPAPEQRGQAKWVVAHHQADSLLDLPAILG
CCCCEEEEECCCCCCCCEEEEEEECCCCCHHCCHHHCC
>Mature Secondary Structure 
TSLSIQAVIFDMDGVLIDSEPLWQRVEYEVLSALGVPVTIETIQQTTGLRIDQCVDYWY
CCCEEEEEEEECCCEEECCCHHHHHHHHHHHHHCCCCEEHHHHHHHHCCCHHHHHHHHH
HKAPWADYDNAKVSTAIVDKVAEEILRTGEAMQGVQQAIDYCQAKGLKIGLATSSFYTII
HCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHH
EAVLSKLGLSDKFMAVQSAEGLTYGKPHPEVYLNCAAALGVDPRYCLAIEDSFNGLIAAR
HHHHHHCCCCCHHEEEECCCCCCCCCCCCCEEEEEHHHHCCCCEEEEEEECCCCCEEEEE
AANMQTVAIPAPEQRGQAKWVVAHHQADSLLDLPAILG
CCCCEEEEECCCCCCCCEEEEEEECCCCCHHCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: glycerol 1-phosphate; H2O

Specific reaction: glycerol 1-phosphate + H2O = glycerol + phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]