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The map label for this gene is tapB [H]

Identifier: 117918876

GI number: 117918876

Start: 476825

End: 478534

Strand: Reverse

Name: tapB [H]

Synonym: Shewana3_0419

Alternate gene names: 117918876

Gene position: 478534-476825 (Counterclockwise)

Preceding gene: 117918878

Following gene: 117918875

Centisome position: 9.62

GC content: 47.49

Gene sequence:

>1710_bases
ATGCCATCCGCTGGCCTTCACCTGGGATTATCCACCCTTTTCATCCGTAAAGGTCTGCTTAATGAAGAGCAGATGGCGAG
TGCCATCACTAAATCCCGCCAAAATAAACAAACCTTAGTCACTACCTTAGTGCAGACTAAGCTAGTGTCGGCTCGCAGTA
TTGCCGAGCTTTGCTATGAGGAATACGGCACCCCGCTGCTGGATTTAGCCGAATTTGATGTTAGTGCCATTCCCGAAGAG
TTTCTGAATAAAAAACTGATTGAAAAGCACCGCTGCTTACCGCTATTTAAGCGCGGTAATCGCCTCTATATCGCCACCTC
TGACCCCACCAATATTGCCGCCCTTGAGGAATTCCAATTTAGTGCAGGCCTACATGCCGAAGCGATTTTGGTGGAAGAAG
ATAAGCTCGCTAAAGCCCTTGAAAAGGTACTAGAAGAAGATATTACTGGCCTTGATTTAAGCGGCATGGATGAAGCAGCA
CTTGCCGGTATCGAAGTTACCGATACCGATAAGCGCCAAGAAGAAAACGCAGGAGAAGCCAGCGATGACGCCCCTATTGT
TATTTATATCAATAAGATATTAACCGATGCCATTCGTAAGGGCGCCTCTGACTTACATTTTGAGCCCTATGAAAAACGCT
ACCGTATCCGTTTTCGTATCGATGGTATTTTGCATGAGGTCTCCGAACCGCCCATTAGTTTAGCAGGGCGACTCTCGGCG
CGCTTAAAGGTAATGTCCAAGCTGGATATTGCCGAGCGCCGCGTCCCACAAGATGGGCGGATTAAAATGAAGCTATCCCG
CACTAAGTCTATCGACTTTCGGGTAAGTACCCTGCCGACCCTGTGGGGCGAGAAGATTGTAATGCGGATATTAGATTCTT
CTTCCGCCCAGCTTGGTATCGAAAAACTCGGTTACGAACCCGATCAAGAAAAGCTTTACCTTGAAATGCTAGCCAAACCT
CAGGGCATGATATTAGTGACAGGCCCAACGGGTTCGGGTAAAACCGTTTCGCTCTACACAGGCTTAAATATCCTCAATAC
CGCCGAGCGTAATATCTCCACTGCCGAAGATCCGGTGGAAATTAACCTTGAGGGGGTAAACCAAGTCCATATTAATTTAA
AAGCGGGTTTAACCTTTGCTTCAGCACTACGTTCGTTTTTGCGGCAAGACCCCGATGTGGTGATGGTCGGGGAAATCCGT
GACCTTGAAACCGCCGAAATTGCCATTAAAGCCGCGCAAACTGGCCACTTAGTATTATCAACCCTGCATACTAACTCGGC
GGCAGAAACGCTCACCCGTTTAATTAATATGGGCGTACCCGGCTATAATATTGCCAGCTCAGTTAATTTAATTATTGCTC
AGCGCCTTGCACGGCGGCTTTGCACTGAATGCAAACAAGCCGAACAGATACCCGAACATGAGCTACAACGCTTAGGCTTT
ACCGATGAGCAAATCGCTCAAGGGTTTACCACCTTTAAACCTGTGGGTTGTGAACATTGTTCTGGTGGCTATAAAGGACG
GGTAGGTATTTACGAAGTGATGAAGATGTCAGATGAAATTGCCCGTACTATTATGGAAGGTGGCAATTCATTGCAGATAG
CAGATCAAGCCAAGGCTCAAGGCATGCGCGACCTGCGGCAATCGGGCCTCCTAAAAGTCCTTCAAGGGGTAACTAGCATT
GCAGAAATCAATAGGGTGACAAGCTTTTAA

Upstream 100 bases:

>100_bases
GATGATACTCATTTTTTTGTGATTATTTGAGCTTTTTTATATATGACAAATAACCTTTTTGCCGCTATGATGGAAAAACT
AATGGAGATAGGAGTTTTTC

Downstream 100 bases:

>100_bases
AGTCTACTCATCTATGACGCATAAAGTGCTCGATAGTTTTTATTTAATCGCTTTTGTTCCATTTTTTATACTAACCTAGT
ACCAATAAAGCTTTAATTAA

Product: type IV-A pilus assembly ATPase PilB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 569; Mature: 568

Protein sequence:

>569_residues
MPSAGLHLGLSTLFIRKGLLNEEQMASAITKSRQNKQTLVTTLVQTKLVSARSIAELCYEEYGTPLLDLAEFDVSAIPEE
FLNKKLIEKHRCLPLFKRGNRLYIATSDPTNIAALEEFQFSAGLHAEAILVEEDKLAKALEKVLEEDITGLDLSGMDEAA
LAGIEVTDTDKRQEENAGEASDDAPIVIYINKILTDAIRKGASDLHFEPYEKRYRIRFRIDGILHEVSEPPISLAGRLSA
RLKVMSKLDIAERRVPQDGRIKMKLSRTKSIDFRVSTLPTLWGEKIVMRILDSSSAQLGIEKLGYEPDQEKLYLEMLAKP
QGMILVTGPTGSGKTVSLYTGLNILNTAERNISTAEDPVEINLEGVNQVHINLKAGLTFASALRSFLRQDPDVVMVGEIR
DLETAEIAIKAAQTGHLVLSTLHTNSAAETLTRLINMGVPGYNIASSVNLIIAQRLARRLCTECKQAEQIPEHELQRLGF
TDEQIAQGFTTFKPVGCEHCSGGYKGRVGIYEVMKMSDEIARTIMEGGNSLQIADQAKAQGMRDLRQSGLLKVLQGVTSI
AEINRVTSF

Sequences:

>Translated_569_residues
MPSAGLHLGLSTLFIRKGLLNEEQMASAITKSRQNKQTLVTTLVQTKLVSARSIAELCYEEYGTPLLDLAEFDVSAIPEE
FLNKKLIEKHRCLPLFKRGNRLYIATSDPTNIAALEEFQFSAGLHAEAILVEEDKLAKALEKVLEEDITGLDLSGMDEAA
LAGIEVTDTDKRQEENAGEASDDAPIVIYINKILTDAIRKGASDLHFEPYEKRYRIRFRIDGILHEVSEPPISLAGRLSA
RLKVMSKLDIAERRVPQDGRIKMKLSRTKSIDFRVSTLPTLWGEKIVMRILDSSSAQLGIEKLGYEPDQEKLYLEMLAKP
QGMILVTGPTGSGKTVSLYTGLNILNTAERNISTAEDPVEINLEGVNQVHINLKAGLTFASALRSFLRQDPDVVMVGEIR
DLETAEIAIKAAQTGHLVLSTLHTNSAAETLTRLINMGVPGYNIASSVNLIIAQRLARRLCTECKQAEQIPEHELQRLGF
TDEQIAQGFTTFKPVGCEHCSGGYKGRVGIYEVMKMSDEIARTIMEGGNSLQIADQAKAQGMRDLRQSGLLKVLQGVTSI
AEINRVTSF
>Mature_568_residues
PSAGLHLGLSTLFIRKGLLNEEQMASAITKSRQNKQTLVTTLVQTKLVSARSIAELCYEEYGTPLLDLAEFDVSAIPEEF
LNKKLIEKHRCLPLFKRGNRLYIATSDPTNIAALEEFQFSAGLHAEAILVEEDKLAKALEKVLEEDITGLDLSGMDEAAL
AGIEVTDTDKRQEENAGEASDDAPIVIYINKILTDAIRKGASDLHFEPYEKRYRIRFRIDGILHEVSEPPISLAGRLSAR
LKVMSKLDIAERRVPQDGRIKMKLSRTKSIDFRVSTLPTLWGEKIVMRILDSSSAQLGIEKLGYEPDQEKLYLEMLAKPQ
GMILVTGPTGSGKTVSLYTGLNILNTAERNISTAEDPVEINLEGVNQVHINLKAGLTFASALRSFLRQDPDVVMVGEIRD
LETAEIAIKAAQTGHLVLSTLHTNSAAETLTRLINMGVPGYNIASSVNLIIAQRLARRLCTECKQAEQIPEHELQRLGFT
DEQIAQGFTTFKPVGCEHCSGGYKGRVGIYEVMKMSDEIARTIMEGGNSLQIADQAKAQGMRDLRQSGLLKVLQGVTSIA
EINRVTSF

Specific function: Involved in the translocation of the type IV pilin [H]

COG id: COG2804

COG function: function code NU; Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

Organism=Escherichia coli, GI1789723, Length=387, Percent_Identity=49.6124031007752, Blast_Score=364, Evalue=1e-102,
Organism=Escherichia coli, GI1786296, Length=424, Percent_Identity=43.8679245283019, Blast_Score=353, Evalue=2e-98,
Organism=Escherichia coli, GI87082188, Length=281, Percent_Identity=33.8078291814947, Blast_Score=125, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013374
- InterPro:   IPR007831
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E; PF05157 GSPII_E_N [H]

EC number: NA

Molecular weight: Translated: 62777; Mature: 62646

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: PS00662 T2SP_E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSAGLHLGLSTLFIRKGLLNEEQMASAITKSRQNKQTLVTTLVQTKLVSARSIAELCYE
CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
EYGTPLLDLAEFDVSAIPEEFLNKKLIEKHRCLPLFKRGNRLYIATSDPTNIAALEEFQF
HHCCCCHHHHHCCHHHCCHHHHHHHHHHHHCCCHHHHCCCEEEEEECCCCCHHHHHHHHH
SAGLHAEAILVEEDKLAKALEKVLEEDITGLDLSGMDEAALAGIEVTDTDKRQEENAGEA
CCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCEECCCCCHHHHCCCCC
SDDAPIVIYINKILTDAIRKGASDLHFEPYEKRYRIRFRIDGILHEVSEPPISLAGRLSA
CCCCCEEEEHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEHHHHHHCCCCCHHHHHHHHH
RLKVMSKLDIAERRVPQDGRIKMKLSRTKSIDFRVSTLPTLWGEKIVMRILDSSSAQLGI
HHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHCCCCHHCCH
EKLGYEPDQEKLYLEMLAKPQGMILVTGPTGSGKTVSLYTGLNILNTAERNISTAEDPVE
HHCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEECCCHHHHHHCCCCCCCCCEE
INLEGVNQVHINLKAGLTFASALRSFLRQDPDVVMVGEIRDLETAEIAIKAAQTGHLVLS
EEEECCEEEEEEEECCCHHHHHHHHHHHCCCCEEEECCCCCCCHHHEEEEECCCCCEEEE
TLHTNSAAETLTRLINMGVPGYNIASSVNLIIAQRLARRLCTECKQAEQIPEHELQRLGF
EECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCC
TDEQIAQGFTTFKPVGCEHCSGGYKGRVGIYEVMKMSDEIARTIMEGGNSLQIADQAKAQ
CHHHHHCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHH
GMRDLRQSGLLKVLQGVTSIAEINRVTSF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PSAGLHLGLSTLFIRKGLLNEEQMASAITKSRQNKQTLVTTLVQTKLVSARSIAELCYE
CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
EYGTPLLDLAEFDVSAIPEEFLNKKLIEKHRCLPLFKRGNRLYIATSDPTNIAALEEFQF
HHCCCCHHHHHCCHHHCCHHHHHHHHHHHHCCCHHHHCCCEEEEEECCCCCHHHHHHHHH
SAGLHAEAILVEEDKLAKALEKVLEEDITGLDLSGMDEAALAGIEVTDTDKRQEENAGEA
CCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCEECCCCCHHHHCCCCC
SDDAPIVIYINKILTDAIRKGASDLHFEPYEKRYRIRFRIDGILHEVSEPPISLAGRLSA
CCCCCEEEEHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEHHHHHHCCCCCHHHHHHHHH
RLKVMSKLDIAERRVPQDGRIKMKLSRTKSIDFRVSTLPTLWGEKIVMRILDSSSAQLGI
HHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHCCCCHHCCH
EKLGYEPDQEKLYLEMLAKPQGMILVTGPTGSGKTVSLYTGLNILNTAERNISTAEDPVE
HHCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEECCCHHHHHHCCCCCCCCCEE
INLEGVNQVHINLKAGLTFASALRSFLRQDPDVVMVGEIRDLETAEIAIKAAQTGHLVLS
EEEECCEEEEEEEECCCHHHHHHHHHHHCCCCEEEECCCCCCCHHHEEEEECCCCCEEEE
TLHTNSAAETLTRLINMGVPGYNIASSVNLIIAQRLARRLCTECKQAEQIPEHELQRLGF
EECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCC
TDEQIAQGFTTFKPVGCEHCSGGYKGRVGIYEVMKMSDEIARTIMEGGNSLQIADQAKAQ
CHHHHHCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHH
GMRDLRQSGLLKVLQGVTSIAEINRVTSF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8820654 [H]