| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is iutA [H]
Identifier: 117918743
GI number: 117918743
Start: 318683
End: 320854
Strand: Reverse
Name: iutA [H]
Synonym: Shewana3_0286
Alternate gene names: 117918743
Gene position: 320854-318683 (Counterclockwise)
Preceding gene: 117918745
Following gene: 117918730
Centisome position: 6.45
GC content: 49.63
Gene sequence:
>2172_bases ATGACGTTCAAAACCTCGTTTGTTGCCCTCGCCGTATTTGCGGCCCTCACCCAGTCTGCCGTCGCTCAAGAAACCCCTGA TACGGGAACGAATAAGAATAAAGACATCGAAAAGATCACTGTCACCGCGAGCCGCATGGATAAATCGCCAAGCTCGATCC CCAATACAGTGACTATTATCGACCGCGTGCAACTCGAAGAGCAGTTCCGTACCACTAAAGATTTGTCGACTATTATCGGT AACTTAGCACCTAGCTTTTCACCCAGCCGTCAGAAGATGAGCAACACGGGCGAAACCCTGCGTGGCCGTCCGCCATTAAT CATGATCGATGGTGTCCCCCAATCCAACCCACTGCGTAGTGGTGGCCGTTCGGGACAAACTATCGACCCCGCGATGATCG AGCGTATTGAAATTATCCACGGCGCCAATGCGATGCACGGCTTAGGCGCGCAGGGCGGCATCATCAACTACATCACCAAA AAACCAACGGGTGATAACCAGCACGTGGTTAGCTTTGATGCCACGGTGCCCGATTCGCTCAAATCTAACGGTGTGAGTTT TGGTGCCAGCTATGCGTTTTCGGGCGAATCCGATCTGATCGATATGTTGGGTTCGGTGAGCTATCGCAATAACGGCGTGT ACTACGATGCAAATCACGATGTGATTGGTGTGGACACAACGCAAGGCGAGTCCATGGACAGCCAGAGCAAGGACTTCTTT ATCAAACTCGGCCACAACTTTGCCGAATCGCGCTTAGAGTTGATGGTTAACCATTACAACATGGAGAACAATGGCGATTG GATGCCTGTGAAAGGCGATATCACCACTGGCAAGCCCACGGGCGCAATCGAAGAAAAACAACCTTGGGAAGCGGCGAACA ACCAAGTCACGACGACTAGCCTCACTTACACCCACGAGAACATTGCCGGCCAACAGCTGAGTGTCCAGCTATTCAATCAG GACTTCGAGGCAGTGTATGGCGGTGGCTGTAACAAGACCTTCTACGATCCTGCATTGGCAAACAACAGTAACTTAGTGCA ATGCGAAGGCCCTAAAGGCGAGAGCTGGTACTATGAGCAATCGCGCAACTCTTCGGTCAAATGGGGCTTAAAGACCTCGT TAATTGCGAAAAATATTGCCGATACGGGTATCGATGCCGCCTATGGTATCGACCTATTCCGCGATACCACTGAGCAGGCT TTAGTGCAGACGGGTTTATCGTGGGTGCCTGAAAGCACCTATGACAACTTCGCGCCTTATTTGCAGTTAGATTATGATTT AATTACCGATCTTACCCTATCGACTGGCGTACGCTACGAGCACGCTAAGCTCAATGTCGATGACTACAAGACGCTCTATG GCGCGGGAAATAAACAAATCGAAGGGGGCGAAGCGAGTTTCGACGAAACCCTATTCAACATAGGTATCTCCTACAAGATC ACTCCAGATATCCGCGTTTACACTAGCTATAACCAAGGCTTTGGTATGCCTGATATCGGCCGTATTCTGCGCGACGGTAA CAGCTTCCCTGGAGCGAACCCCAGCATCAGCGACTCCCTATCTCTTGCACCTATTGTGACGGATAACGTGGAGTTTGGCG CCGATTACCAAGGTGAATACTTAAGCGCTAAGATTTCGTACTACCGCTCAGCCACGGATTATGGCGCCCGTTTAGCCTTA AACAGCGATGGCTTCTACGACGTTAAACGTGAGAAGAGCGTGATTGATGGTATCGAAGCCAATATTACAGCTTACCTGAC CAGCAACGATGATCTGGGCATGAATCTGGCGATCCAGCGCGGTGAATACGATTCGAATGATGACAACAAAACAGATACCG ATCTCGATGGTGCCAATATTTCACCAAATCGTATCAACCTGTTCTGGACCCATAATTTCGATAACGAGATGTCGACGCGC GTACAGGCAAACTACTTTATGGACCGTGACTTCGAAGATGCCACAGGCGAGAAATATGCCGAGTTTGATGGCTACACGAC TGTCGATGCGTCATTCTCTATGCCGCTCTACACTGGCACCTTAACCTTAGGCGTGCAAAACCTGTTTAATAAGGATTATT TCAACTACTACTCACAAACCATGGGTACAAATGATCGTTATTTCAAAGGCATGGGCCGCACTGCGACTATCGGCTATACA GTGGCATTCTAA
Upstream 100 bases:
>100_bases AGCAATAAAAATCGTTATCATTTGCAATGTTGTTTAACGGAATAGTCTGATGCCAAGGATATCGGTGTAGCAAATTCACT CGCCCTTAGCAGGAAGTTAT
Downstream 100 bases:
>100_bases TTAGTACGCTAAATTTACCGTATAAAAAGCGCAACCTAGGTTGCGCTTTTTTATTGGATTACTAGAACCACTAATCTTTA GTGACCACCCAGAGGGCGTG
Product: TonB-dependent receptor
Products: NA
Alternate protein names: Cloacin receptor [H]
Number of amino acids: Translated: 723; Mature: 722
Protein sequence:
>723_residues MTFKTSFVALAVFAALTQSAVAQETPDTGTNKNKDIEKITVTASRMDKSPSSIPNTVTIIDRVQLEEQFRTTKDLSTIIG NLAPSFSPSRQKMSNTGETLRGRPPLIMIDGVPQSNPLRSGGRSGQTIDPAMIERIEIIHGANAMHGLGAQGGIINYITK KPTGDNQHVVSFDATVPDSLKSNGVSFGASYAFSGESDLIDMLGSVSYRNNGVYYDANHDVIGVDTTQGESMDSQSKDFF IKLGHNFAESRLELMVNHYNMENNGDWMPVKGDITTGKPTGAIEEKQPWEAANNQVTTTSLTYTHENIAGQQLSVQLFNQ DFEAVYGGGCNKTFYDPALANNSNLVQCEGPKGESWYYEQSRNSSVKWGLKTSLIAKNIADTGIDAAYGIDLFRDTTEQA LVQTGLSWVPESTYDNFAPYLQLDYDLITDLTLSTGVRYEHAKLNVDDYKTLYGAGNKQIEGGEASFDETLFNIGISYKI TPDIRVYTSYNQGFGMPDIGRILRDGNSFPGANPSISDSLSLAPIVTDNVEFGADYQGEYLSAKISYYRSATDYGARLAL NSDGFYDVKREKSVIDGIEANITAYLTSNDDLGMNLAIQRGEYDSNDDNKTDTDLDGANISPNRINLFWTHNFDNEMSTR VQANYFMDRDFEDATGEKYAEFDGYTTVDASFSMPLYTGTLTLGVQNLFNKDYFNYYSQTMGTNDRYFKGMGRTATIGYT VAF
Sequences:
>Translated_723_residues MTFKTSFVALAVFAALTQSAVAQETPDTGTNKNKDIEKITVTASRMDKSPSSIPNTVTIIDRVQLEEQFRTTKDLSTIIG NLAPSFSPSRQKMSNTGETLRGRPPLIMIDGVPQSNPLRSGGRSGQTIDPAMIERIEIIHGANAMHGLGAQGGIINYITK KPTGDNQHVVSFDATVPDSLKSNGVSFGASYAFSGESDLIDMLGSVSYRNNGVYYDANHDVIGVDTTQGESMDSQSKDFF IKLGHNFAESRLELMVNHYNMENNGDWMPVKGDITTGKPTGAIEEKQPWEAANNQVTTTSLTYTHENIAGQQLSVQLFNQ DFEAVYGGGCNKTFYDPALANNSNLVQCEGPKGESWYYEQSRNSSVKWGLKTSLIAKNIADTGIDAAYGIDLFRDTTEQA LVQTGLSWVPESTYDNFAPYLQLDYDLITDLTLSTGVRYEHAKLNVDDYKTLYGAGNKQIEGGEASFDETLFNIGISYKI TPDIRVYTSYNQGFGMPDIGRILRDGNSFPGANPSISDSLSLAPIVTDNVEFGADYQGEYLSAKISYYRSATDYGARLAL NSDGFYDVKREKSVIDGIEANITAYLTSNDDLGMNLAIQRGEYDSNDDNKTDTDLDGANISPNRINLFWTHNFDNEMSTR VQANYFMDRDFEDATGEKYAEFDGYTTVDASFSMPLYTGTLTLGVQNLFNKDYFNYYSQTMGTNDRYFKGMGRTATIGYT VAF >Mature_722_residues TFKTSFVALAVFAALTQSAVAQETPDTGTNKNKDIEKITVTASRMDKSPSSIPNTVTIIDRVQLEEQFRTTKDLSTIIGN LAPSFSPSRQKMSNTGETLRGRPPLIMIDGVPQSNPLRSGGRSGQTIDPAMIERIEIIHGANAMHGLGAQGGIINYITKK PTGDNQHVVSFDATVPDSLKSNGVSFGASYAFSGESDLIDMLGSVSYRNNGVYYDANHDVIGVDTTQGESMDSQSKDFFI KLGHNFAESRLELMVNHYNMENNGDWMPVKGDITTGKPTGAIEEKQPWEAANNQVTTTSLTYTHENIAGQQLSVQLFNQD FEAVYGGGCNKTFYDPALANNSNLVQCEGPKGESWYYEQSRNSSVKWGLKTSLIAKNIADTGIDAAYGIDLFRDTTEQAL VQTGLSWVPESTYDNFAPYLQLDYDLITDLTLSTGVRYEHAKLNVDDYKTLYGAGNKQIEGGEASFDETLFNIGISYKIT PDIRVYTSYNQGFGMPDIGRILRDGNSFPGANPSISDSLSLAPIVTDNVEFGADYQGEYLSAKISYYRSATDYGARLALN SDGFYDVKREKSVIDGIEANITAYLTSNDDLGMNLAIQRGEYDSNDDNKTDTDLDGANISPNRINLFWTHNFDNEMSTRV QANYFMDRDFEDATGEKYAEFDGYTTVDASFSMPLYTGTLTLGVQNLFNKDYFNYYSQTMGTNDRYFKGMGRTATIGYTV AF
Specific function: Receptor for cloacin DF13/aerobactin [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786798, Length=179, Percent_Identity=35.195530726257, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 79712; Mature: 79581
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFKTSFVALAVFAALTQSAVAQETPDTGTNKNKDIEKITVTASRMDKSPSSIPNTVTII CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHCCCCCCCCCCEEEEE DRVQLEEQFRTTKDLSTIIGNLAPSFSPSRQKMSNTGETLRGRPPLIMIDGVPQSNPLRS EHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHCCCCCEEEECCCCCCCCCCC GGRSGQTIDPAMIERIEIIHGANAMHGLGAQGGIINYITKKPTGDNQHVVSFDATVPDSL CCCCCCCCCHHHHHHHHHHCCCCHHCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCHH KSNGVSFGASYAFSGESDLIDMLGSVSYRNNGVYYDANHDVIGVDTTQGESMDSQSKDFF HCCCCCCCCEEEECCCHHHHHHHHCCEECCCCEEEECCCCEEEEECCCCCCCCCCCCCEE IKLGHNFAESRLELMVNHYNMENNGDWMPVKGDITTGKPTGAIEEKQPWEAANNQVTTTS EEECCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHCCCEEEEEE LTYTHENIAGQQLSVQLFNQDFEAVYGGGCNKTFYDPALANNSNLVQCEGPKGESWYYEQ EEEEECCCCCCEEEEEECCCCHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEC SRNSSVKWGLKTSLIAKNIADTGIDAAYGIDLFRDTTEQALVQTGLSWVPESTYDNFAPY CCCCCEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCE LQLDYDLITDLTLSTGVRYEHAKLNVDDYKTLYGAGNKQIEGGEASFDETLFNIGISYKI EEECHHHHHCCHHHCCCEEEEEEECHHHHHHHHCCCCCEECCCCCCHHHHHHHCCEEEEE TPDIRVYTSYNQGFGMPDIGRILRDGNSFPGANPSISDSLSLAPIVTDNVEFGADYQGEY CCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCE LSAKISYYRSATDYGARLALNSDGFYDVKREKSVIDGIEANITAYLTSNDDLGMNLAIQR EEEEEHHHHCCCCCCEEEEECCCCCEECHHHHHHHCCCCCCEEEEEECCCCCCEEEEEEC GEYDSNDDNKTDTDLDGANISPNRINLFWTHNFDNEMSTRVQANYFMDRDFEDATGEKYA CCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHEEEEEEEECCCCCCCCCCCCH EFDGYTTVDASFSMPLYTGTLTLGVQNLFNKDYFNYYSQTMGTNDRYFKGMGRTATIGYT HCCCEEEECCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCEEEEEEE VAF EEC >Mature Secondary Structure TFKTSFVALAVFAALTQSAVAQETPDTGTNKNKDIEKITVTASRMDKSPSSIPNTVTII CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHCCCCCCCCCCEEEEE DRVQLEEQFRTTKDLSTIIGNLAPSFSPSRQKMSNTGETLRGRPPLIMIDGVPQSNPLRS EHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHCCCCCEEEECCCCCCCCCCC GGRSGQTIDPAMIERIEIIHGANAMHGLGAQGGIINYITKKPTGDNQHVVSFDATVPDSL CCCCCCCCCHHHHHHHHHHCCCCHHCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCHH KSNGVSFGASYAFSGESDLIDMLGSVSYRNNGVYYDANHDVIGVDTTQGESMDSQSKDFF HCCCCCCCCEEEECCCHHHHHHHHCCEECCCCEEEECCCCEEEEECCCCCCCCCCCCCEE IKLGHNFAESRLELMVNHYNMENNGDWMPVKGDITTGKPTGAIEEKQPWEAANNQVTTTS EEECCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHCCCEEEEEE LTYTHENIAGQQLSVQLFNQDFEAVYGGGCNKTFYDPALANNSNLVQCEGPKGESWYYEQ EEEEECCCCCCEEEEEECCCCHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEC SRNSSVKWGLKTSLIAKNIADTGIDAAYGIDLFRDTTEQALVQTGLSWVPESTYDNFAPY CCCCCEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCE LQLDYDLITDLTLSTGVRYEHAKLNVDDYKTLYGAGNKQIEGGEASFDETLFNIGISYKI EEECHHHHHCCHHHCCCEEEEEEECHHHHHHHHCCCCCEECCCCCCHHHHHHHCCEEEEE TPDIRVYTSYNQGFGMPDIGRILRDGNSFPGANPSISDSLSLAPIVTDNVEFGADYQGEY CCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCE LSAKISYYRSATDYGARLALNSDGFYDVKREKSVIDGIEANITAYLTSNDDLGMNLAIQR EEEEEHHHHCCCCCCEEEEECCCCCEECHHHHHHHCCCCCCEEEEEECCCCCCEEEEEEC GEYDSNDDNKTDTDLDGANISPNRINLFWTHNFDNEMSTRVQANYFMDRDFEDATGEKYA CCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHEEEEEEEECCCCCCCCCCCCH EFDGYTTVDASFSMPLYTGTLTLGVQNLFNKDYFNYYSQTMGTNDRYFKGMGRTATIGYT HCCCEEEECCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCEEEEEEE VAF EEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA