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The map label for this gene is ydiS [C]

Identifier: 117918730

GI number: 117918730

Start: 307775

End: 309424

Strand: Reverse

Name: ydiS [C]

Synonym: Shewana3_0273

Alternate gene names: 117918730

Gene position: 309424-307775 (Counterclockwise)

Preceding gene: 117918743

Following gene: 117918729

Centisome position: 6.22

GC content: 51.52

Gene sequence:

>1650_bases
ATGGAACGCGAATCAATGGAATTCGATGTTGTTATCGTCGGCGCAGGCCCAGCTGGCTTGGCCACTGCGTGTCGGTTGAT
GCAGATATCACAGAGTTCAGGTAAAGAGATTACCGTCTGCGTGGTAGAAAAAGGCTCCGAAGTGGGTGCGCACATTCTAT
CTGGTGCCGTATTCGAACCACGAGTGTTAGATGAGCTATTCAGCGACTGGCGCGATTCAGGCGCTCCCGTCACCACAGCT
GTGACTCACGATGAAATCTATCTACTCAATTCCGCCACCGACAGCAAGCTGATGCCCAATGCGTTTGTGCCTAAAACCAT
GCACAACGAAGGCAACTATATTGTCAGCGTAGGTAACCTCTGCCGTTGGCTCGCGACCCGCGCCGAAGCGCTCGGCGTAG
AAATCTTCCCTGGCTTTGCTGCCAGCGAATTACTCTTCAATGAAGATAACAGCGTGAAGGGTATCCTGATTGGCGATATG
GGCGTCGGTGCCGACGGCCAGCCGAAAGACAGTTTTATGCCCGGCATGGAGCTCCACGCTAAATATACCGTATTCTCAGA
AGGTTGCCGCGGTCACTTAGGCAAACAGCTGATCGCGAAATACCACTTAGATAATGGCAAGACACCACAGCATTACGGCC
TGGGCTTTAAGGAAATCTGGAAAGTTCCCGCCGAACAACACGAGCAGGGTAAAGTGGTGCACACAGGTGGTTGGCCATTA
ACCGATGGCGCATCGGGTGGCGGCTTCCTCTACCATATGGAAGACAACCAAATTGCCGTGGGTCTGATTATCGACCTCAA
CTACAAGAATCCCCATTTAAGCCCGTTCGATGAGTTCCAACGTTATAAGACTCACCCAGTTATCGCCAAATACTTAACTG
GCGGCGAGCGTTTGACCTACGGTGCTCGTGCAATCACTAAGGGCGGGTTGAACTCACTGCCGAAGATGAGTTTCCCCGGC
GGTCTGTTGATTGGTTGCGATGCGGGAACCTTAAACTTTGCCAAGATCAAAGGCACCCACACCGCCATGAAGAGCGGTAT
TGTCGCGGCTGAAACCTTAGCCAAAGCGATGCTGGCCGAGGTTGAAGGCGGTAAAGATCTGGATTGTTTCCAAACCCATT
TGGAAGAAAGCTGGTTACACGAAGAGTTGTATAAGTCGCGCAACTTTGGCCCAGCAATGCACAAGTTTGGCACTTTCCTC
GGCGGCGCATTTAACTACATAGATCAAAACTGGTTCGGCGGTAAGTTCCCCATCACTCTGCGTGATGAGCACCCAGACTA
TGCACAAATGGCCCCTGTCAGTGCCTACAGCAAGATTGATTATCCCAAGCCCGATGGCAAACTCAGCTTCGATAAGCTCT
CTTCAGTTTACCTGTCGAGCACTTATCATGAGGAAGACCAGCCTTGTCATCTGCGCTTAAAAGACAACAGCATCCCGCTC
GGGATAAACCTGACGCAATTTAACGAACCCGCCCAGCGTTACTGCCCTGCTGGCGTGTACGAAATCGTTGAAGAAGCAGG
CCAGCCTAAGTTTGTGATCAATGCGCAAAACTGCATCCACTGCAAAACCTGCGACATTAAAGACCCGAGCCAAAACATTA
CTTGGGTGACGCCTGAGGGTGGCGGTGGTCCAAACTACCCGAATATGTAA

Upstream 100 bases:

>100_bases
GATTTTGAGGTAAGGTGGACATCAGCAATAAAACGCCCGTTTACAAACAAACTACAACACCCGGTAAAAATCGGGGATAT
GCGAAGGAAGAGGTGAACTG

Downstream 100 bases:

>100_bases
CTCAACCGGAATAAGGCGCTCATTGAGCGCCTTATTTTTGCTTGCCTTCACGCCACACTTTGGTCACAATCACGCCATAA
AAATCACATGCTTCAAATCA

Product: electron transfer flavoprotein-ubiquinone oxidoreductase

Products: NA

Alternate protein names: ETF-QO; ETF-ubiquinone oxidoreductase; Electron-transferring-flavoprotein dehydrogenase; ETF dehydrogenase [H]

Number of amino acids: Translated: 549; Mature: 549

Protein sequence:

>549_residues
MERESMEFDVVIVGAGPAGLATACRLMQISQSSGKEITVCVVEKGSEVGAHILSGAVFEPRVLDELFSDWRDSGAPVTTA
VTHDEIYLLNSATDSKLMPNAFVPKTMHNEGNYIVSVGNLCRWLATRAEALGVEIFPGFAASELLFNEDNSVKGILIGDM
GVGADGQPKDSFMPGMELHAKYTVFSEGCRGHLGKQLIAKYHLDNGKTPQHYGLGFKEIWKVPAEQHEQGKVVHTGGWPL
TDGASGGGFLYHMEDNQIAVGLIIDLNYKNPHLSPFDEFQRYKTHPVIAKYLTGGERLTYGARAITKGGLNSLPKMSFPG
GLLIGCDAGTLNFAKIKGTHTAMKSGIVAAETLAKAMLAEVEGGKDLDCFQTHLEESWLHEELYKSRNFGPAMHKFGTFL
GGAFNYIDQNWFGGKFPITLRDEHPDYAQMAPVSAYSKIDYPKPDGKLSFDKLSSVYLSSTYHEEDQPCHLRLKDNSIPL
GINLTQFNEPAQRYCPAGVYEIVEEAGQPKFVINAQNCIHCKTCDIKDPSQNITWVTPEGGGGPNYPNM

Sequences:

>Translated_549_residues
MERESMEFDVVIVGAGPAGLATACRLMQISQSSGKEITVCVVEKGSEVGAHILSGAVFEPRVLDELFSDWRDSGAPVTTA
VTHDEIYLLNSATDSKLMPNAFVPKTMHNEGNYIVSVGNLCRWLATRAEALGVEIFPGFAASELLFNEDNSVKGILIGDM
GVGADGQPKDSFMPGMELHAKYTVFSEGCRGHLGKQLIAKYHLDNGKTPQHYGLGFKEIWKVPAEQHEQGKVVHTGGWPL
TDGASGGGFLYHMEDNQIAVGLIIDLNYKNPHLSPFDEFQRYKTHPVIAKYLTGGERLTYGARAITKGGLNSLPKMSFPG
GLLIGCDAGTLNFAKIKGTHTAMKSGIVAAETLAKAMLAEVEGGKDLDCFQTHLEESWLHEELYKSRNFGPAMHKFGTFL
GGAFNYIDQNWFGGKFPITLRDEHPDYAQMAPVSAYSKIDYPKPDGKLSFDKLSSVYLSSTYHEEDQPCHLRLKDNSIPL
GINLTQFNEPAQRYCPAGVYEIVEEAGQPKFVINAQNCIHCKTCDIKDPSQNITWVTPEGGGGPNYPNM
>Mature_549_residues
MERESMEFDVVIVGAGPAGLATACRLMQISQSSGKEITVCVVEKGSEVGAHILSGAVFEPRVLDELFSDWRDSGAPVTTA
VTHDEIYLLNSATDSKLMPNAFVPKTMHNEGNYIVSVGNLCRWLATRAEALGVEIFPGFAASELLFNEDNSVKGILIGDM
GVGADGQPKDSFMPGMELHAKYTVFSEGCRGHLGKQLIAKYHLDNGKTPQHYGLGFKEIWKVPAEQHEQGKVVHTGGWPL
TDGASGGGFLYHMEDNQIAVGLIIDLNYKNPHLSPFDEFQRYKTHPVIAKYLTGGERLTYGARAITKGGLNSLPKMSFPG
GLLIGCDAGTLNFAKIKGTHTAMKSGIVAAETLAKAMLAEVEGGKDLDCFQTHLEESWLHEELYKSRNFGPAMHKFGTFL
GGAFNYIDQNWFGGKFPITLRDEHPDYAQMAPVSAYSKIDYPKPDGKLSFDKLSSVYLSSTYHEEDQPCHLRLKDNSIPL
GINLTQFNEPAQRYCPAGVYEIVEEAGQPKFVINAQNCIHCKTCDIKDPSQNITWVTPEGGGGPNYPNM

Specific function: Accepts electrons from ETF and reduces ubiquinone [H]

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI119703746, Length=559, Percent_Identity=50.8050089445438, Blast_Score=568, Evalue=1e-162,
Organism=Escherichia coli, GI1787991, Length=398, Percent_Identity=27.1356783919598, Blast_Score=106, Evalue=5e-24,
Organism=Escherichia coli, GI1786227, Length=387, Percent_Identity=27.906976744186, Blast_Score=105, Evalue=5e-24,
Organism=Escherichia coli, GI87082155, Length=336, Percent_Identity=25.8928571428571, Blast_Score=84, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI25144720, Length=559, Percent_Identity=50.0894454382826, Blast_Score=556, Evalue=1e-158,
Organism=Saccharomyces cerevisiae, GI6324932, Length=575, Percent_Identity=44.695652173913, Blast_Score=481, Evalue=1e-136,
Organism=Drosophila melanogaster, GI24652256, Length=556, Percent_Identity=52.3381294964029, Blast_Score=570, Evalue=1e-163,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR007859
- InterPro:   IPR003042 [H]

Pfam domain/function: PF05187 ETF_QO [H]

EC number: =1.5.5.1 [H]

Molecular weight: Translated: 60081; Mature: 60081

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERESMEFDVVIVGAGPAGLATACRLMQISQSSGKEITVCVVEKGSEVGAHILSGAVFEP
CCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHCCCCCCH
RVLDELFSDWRDSGAPVTTAVTHDEIYLLNSATDSKLMPNAFVPKTMHNEGNYIVSVGNL
HHHHHHHHHHHCCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCEECCCCCEEEEHHHH
CRWLATRAEALGVEIFPGFAASELLFNEDNSVKGILIGDMGVGADGQPKDSFMPGMELHA
HHHHHHHHHHCCEEEECCCCHHHEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEE
KYTVFSEGCRGHLGKQLIAKYHLDNGKTPQHYGLGFKEIWKVPAEQHEQGKVVHTGGWPL
EEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHCCCCCCCCCCCEEECCCCCC
TDGASGGGFLYHMEDNQIAVGLIIDLNYKNPHLSPFDEFQRYKTHPVIAKYLTGGERLTY
CCCCCCCEEEEEECCCCEEEEEEEEECCCCCCCCCHHHHHHHCCCCHHHHHHCCCCEEEC
GARAITKGGLNSLPKMSFPGGLLIGCDAGTLNFAKIKGTHTAMKSGIVAAETLAKAMLAE
CHHHHHCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCHHHHHHCCCHHHHHHHHHHHHH
VEGGKDLDCFQTHLEESWLHEELYKSRNFGPAMHKFGTFLGGAFNYIDQNWFGGKFPITL
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHCCCCCCCEEEEEE
RDEHPDYAQMAPVSAYSKIDYPKPDGKLSFDKLSSVYLSSTYHEEDQPCHLRLKDNSIPL
CCCCCCHHHHCCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCEE
GINLTQFNEPAQRYCPAGVYEIVEEAGQPKFVINAQNCIHCKTCDIKDPSQNITWVTPEG
EEEECCCCCHHHHHCCCHHHHHHHHCCCCEEEEECCCEEEEEECCCCCCCCCEEEECCCC
GGGPNYPNM
CCCCCCCCC
>Mature Secondary Structure
MERESMEFDVVIVGAGPAGLATACRLMQISQSSGKEITVCVVEKGSEVGAHILSGAVFEP
CCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHCCCCCCH
RVLDELFSDWRDSGAPVTTAVTHDEIYLLNSATDSKLMPNAFVPKTMHNEGNYIVSVGNL
HHHHHHHHHHHCCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCEECCCCCEEEEHHHH
CRWLATRAEALGVEIFPGFAASELLFNEDNSVKGILIGDMGVGADGQPKDSFMPGMELHA
HHHHHHHHHHCCEEEECCCCHHHEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEE
KYTVFSEGCRGHLGKQLIAKYHLDNGKTPQHYGLGFKEIWKVPAEQHEQGKVVHTGGWPL
EEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHCCCCCCCCCCCEEECCCCCC
TDGASGGGFLYHMEDNQIAVGLIIDLNYKNPHLSPFDEFQRYKTHPVIAKYLTGGERLTY
CCCCCCCEEEEEECCCCEEEEEEEEECCCCCCCCCHHHHHHHCCCCHHHHHHCCCCEEEC
GARAITKGGLNSLPKMSFPGGLLIGCDAGTLNFAKIKGTHTAMKSGIVAAETLAKAMLAE
CHHHHHCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCHHHHHHCCCHHHHHHHHHHHHH
VEGGKDLDCFQTHLEESWLHEELYKSRNFGPAMHKFGTFLGGAFNYIDQNWFGGKFPITL
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHCCCCCCCEEEEEE
RDEHPDYAQMAPVSAYSKIDYPKPDGKLSFDKLSSVYLSSTYHEEDQPCHLRLKDNSIPL
CCCCCCHHHHCCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCEE
GINLTQFNEPAQRYCPAGVYEIVEEAGQPKFVINAQNCIHCKTCDIKDPSQNITWVTPEG
EEEECCCCCHHHHHCCCHHHHHHHHCCCCEEEEECCCEEEEEECCCCCCCCCEEEECCCC
GGGPNYPNM
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]