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The map label for this gene is shp [H]

Identifier: 117918701

GI number: 117918701

Start: 276075

End: 276509

Strand: Reverse

Name: shp [H]

Synonym: Shewana3_0244

Alternate gene names: 117918701

Gene position: 276509-276075 (Counterclockwise)

Preceding gene: 117918702

Following gene: 117918700

Centisome position: 5.56

GC content: 53.56

Gene sequence:

>435_bases
ATGAACAACAACCTGAATAAAAGCCTGATGGGACTGGCGCTCACTGTGGTACTGCTCAGCAGTGTTAATGCCAGTGCCGC
CAATACTAAGGTCGCCAGCTTGCCACTCAGCGCCGAGCGAATTGGCTTACAACTGCAACAATATCAGGCACAAGGTGCAG
GCCCCTTTAGCGCCGCAGCAGGACAAGCACTGTGGCTACAGCAGAGTGAAGACCGCAGCTGTGCCAGCTGCCACACCGCC
AAAGTGACAGACTCAGGTATGCATCAAAACACCCGAAAGTCCATCGAGGCCATGGCGCCGTCGCTCACCAGTAACCGTTT
AACCGATGCGGCCAAGATTGAGAAATGGTTTACCCGCAACTGTAACTGGACCTTTAAACGCGAGTGCACGCCTCAAGAAA
AAGGCGACGTACTGCTGTGGCTGAGTTTGCAATAA

Upstream 100 bases:

>100_bases
CCTCGTCAAAGCCATGCTGACAGGTAAAAAGCAGCGCCAACTGATCCAACAAGATGAACATCAATAATCGTCACAATCCG
ACCGTTCAAAGGAGTCAGAC

Downstream 100 bases:

>100_bases
CGGCGTTATTCACATCCATTTTAATCATTAAAACCTAAGGAAATATCATGACTAAACAAGCCCATCCCCTAAGCTGGATT
GTAGGTTCAACACTCACCGC

Product: cytochrome c-type protein Shp

Products: NA

Alternate protein names: Oxygen-binding heme protein; Sphaeroides heme protein [H]

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MNNNLNKSLMGLALTVVLLSSVNASAANTKVASLPLSAERIGLQLQQYQAQGAGPFSAAAGQALWLQQSEDRSCASCHTA
KVTDSGMHQNTRKSIEAMAPSLTSNRLTDAAKIEKWFTRNCNWTFKRECTPQEKGDVLLWLSLQ

Sequences:

>Translated_144_residues
MNNNLNKSLMGLALTVVLLSSVNASAANTKVASLPLSAERIGLQLQQYQAQGAGPFSAAAGQALWLQQSEDRSCASCHTA
KVTDSGMHQNTRKSIEAMAPSLTSNRLTDAAKIEKWFTRNCNWTFKRECTPQEKGDVLLWLSLQ
>Mature_144_residues
MNNNLNKSLMGLALTVVLLSSVNASAANTKVASLPLSAERIGLQLQQYQAQGAGPFSAAAGQALWLQQSEDRSCASCHTA
KVTDSGMHQNTRKSIEAMAPSLTSNRLTDAAKIEKWFTRNCNWTFKRECTPQEKGDVLLWLSLQ

Specific function: High-spin cytochrome. Transiently bind oxygen during autoxidation, which occurs with a half-life of 3 min with a 4-fold excess of O(2). Also binds carbon monoxide, azide and cyanide [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR015170 [H]

Pfam domain/function: PF09086 DUF1924 [H]

EC number: NA

Molecular weight: Translated: 15683; Mature: 15683

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNNLNKSLMGLALTVVLLSSVNASAANTKVASLPLSAERIGLQLQQYQAQGAGPFSAAA
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCC
GQALWLQQSEDRSCASCHTAKVTDSGMHQNTRKSIEAMAPSLTSNRLTDAAKIEKWFTRN
CCEEEEECCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHCHHHHHHHHHHHCC
CNWTFKRECTPQEKGDVLLWLSLQ
CCEEEECCCCCCCCCCEEEEEECC
>Mature Secondary Structure
MNNNLNKSLMGLALTVVLLSSVNASAANTKVASLPLSAERIGLQLQQYQAQGAGPFSAAA
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCC
GQALWLQQSEDRSCASCHTAKVTDSGMHQNTRKSIEAMAPSLTSNRLTDAAKIEKWFTRN
CCEEEEECCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHCHHHHHHHHHHHCC
CNWTFKRECTPQEKGDVLLWLSLQ
CCEEEECCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9558336; 10821858 [H]